RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 TLR7Q9NYK1 1049 aaKnown RBP27.61■■■□□ 2.01
ECHDC1-203ENST00000368291 DBNLQ9UJU6 430 aaKnown RBP27.61■■■□□ 2.01
ECHDC1-203ENST00000368291 CELF2O95319 508 aaKnown RBP27.6■■■□□ 2.01
ECHDC1-203ENST00000368291 RBM5P52756 815 aaKnown RBP eCLIP27.6■■■□□ 2.01
ECHDC1-203ENST00000368291 CCDC8Q9H0W5 538 aaPredicted RBP27.6■■■□□ 2.01
ECHDC1-203ENST00000368291 HMG20BQ9P0W2 317 aa27.6■■■□□ 2.01
ECHDC1-203ENST00000368291 PCDHB15Q9Y5E8 787 aa27.6■■■□□ 2.01
ECHDC1-203ENST00000368291 PI16Q6UXB8 463 aa27.6■■■□□ 2.01
ECHDC1-203ENST00000368291 MRIQ9BWK5 157 aa27.6■■■□□ 2.01
ECHDC1-203ENST00000368291 IL1RAPL2Q9NP60 686 aa27.6■■■□□ 2.01
ECHDC1-203ENST00000368291 MCAMP43121 646 aa27.59■■■□□ 2.01
ECHDC1-203ENST00000368291 KLRG1Q96E93 195 aa27.59■■■□□ 2.01
ECHDC1-203ENST00000368291 ZNF408Q9H9D4 720 aa27.59■■■□□ 2.01
ECHDC1-203ENST00000368291 RAB11FIP3O75154 756 aa27.58■■■□□ 2.01
ECHDC1-203ENST00000368291 KIF1BPQ96EK5 621 aa27.58■■■□□ 2.01
ECHDC1-203ENST00000368291 CDCA5Q96FF9 252 aa27.58■■■□□ 2.01
ECHDC1-203ENST00000368291 SUPT16HQ9Y5B9 1047 aaKnown RBP27.58■■■□□ 2.01
ECHDC1-203ENST00000368291 MAST3O60307 1309 aa27.57■■■□□ 2
ECHDC1-203ENST00000368291 CLRN2A0PK11 232 aa27.57■■■□□ 2
ECHDC1-203ENST00000368291 APBB1O00213 710 aa27.57■■■□□ 2
ECHDC1-203ENST00000368291 APOBEC3FQ8IUX4 373 aaKnown RBP27.57■■■□□ 2
ECHDC1-203ENST00000368291 TEKT1Q969V4 418 aa27.57■■■□□ 2
ECHDC1-203ENST00000368291 LDHBP07195 334 aaKnown RBP27.56■■■□□ 2
ECHDC1-203ENST00000368291 UQCRFS1P1P0C7P4 283 aa27.56■■■□□ 2
ECHDC1-203ENST00000368291 PRAMEF18Q5VWM3 479 aa27.56■■■□□ 2
ECHDC1-203ENST00000368291 AACSQ86V21 672 aa27.56■■■□□ 2
ECHDC1-203ENST00000368291 SPATA5Q8NB90 893 aa27.56■■■□□ 2
ECHDC1-203ENST00000368291 ZDHHC15Q96MV8 337 aa27.56■■■□□ 2
ECHDC1-203ENST00000368291 TDRD3Q9H7E2 651 aaKnown RBP27.56■■■□□ 2
ECHDC1-203ENST00000368291 TLL2Q9Y6L7 1015 aa27.56■■■□□ 2
ECHDC1-203ENST00000368291 CNTNAP1P78357 1384 aa27.56■■■□□ 2
ECHDC1-203ENST00000368291 MYO1BO43795 1136 aa27.55■■■□□ 2
ECHDC1-203ENST00000368291 CCDC158Q5M9N0 1113 aa27.55■■■□□ 2
ECHDC1-203ENST00000368291 TTC39AQ5SRH9 613 aa27.55■■■□□ 2
ECHDC1-203ENST00000368291 HHIPL2Q6UWX4 724 aa27.55■■■□□ 2
ECHDC1-203ENST00000368291 ZNF512BQ96KM6 892 aaPredicted RBP27.55■■■□□ 2
ECHDC1-203ENST00000368291 MKRN1Q9UHC7 482 aaKnown RBP27.55■■■□□ 2
ECHDC1-203ENST00000368291 RASSF10A6NK89 507 aa27.54■■■□□ 2
ECHDC1-203ENST00000368291 DIXDC1Q155Q3 683 aa27.54■■■□□ 2
ECHDC1-203ENST00000368291 SPDYE2Q495Y8 402 aa27.54■■■□□ 2
ECHDC1-203ENST00000368291 APOBEC3HQ6NTF7 200 aaKnown RBP27.54■■■□□ 2
ECHDC1-203ENST00000368291 SAPCD2Q86UD0 394 aa27.54■■■□□ 2
ECHDC1-203ENST00000368291 ZGPATQ8N5A5 531 aaKnown RBP27.54■■■□□ 2
ECHDC1-203ENST00000368291 ZNF70Q9UC06 446 aaPredicted RBP27.54■■■□□ 2
ECHDC1-203ENST00000368291 ABCF2Q9UG63 623 aa27.54■■■□□ 2
ECHDC1-203ENST00000368291 ABT1Q9ULW3 272 aaKnown RBP27.54■■■□□ 2
ECHDC1-203ENST00000368291 DCTPP1Q9H773 170 aa27.53■■■□□ 2
ECHDC1-203ENST00000368291 TBC1D9Q6ZT07 1266 aa27.52■■■□□ 2
ECHDC1-203ENST00000368291 CLASRPQ8N2M8 674 aaKnown RBP27.52■■■□□ 2
ECHDC1-203ENST00000368291 SNRKQ9NRH2 765 aa27.52■■■□□ 2
ECHDC1-203ENST00000368291 ZNF384Q8TF68 577 aa27.51■■□□□ 1.99
ECHDC1-203ENST00000368291 DEFB129Q9H1M3 183 aa27.51■■□□□ 1.99
ECHDC1-203ENST00000368291 VEZTQ9HBM0 779 aa27.51■■□□□ 1.99
ECHDC1-203ENST00000368291 GBA2Q9HCG7 927 aaPredicted RBP27.51■■□□□ 1.99
ECHDC1-203ENST00000368291 DAGLAQ9Y4D2 1042 aa27.51■■□□□ 1.99
ECHDC1-203ENST00000368291 PAPPA2Q9BXP8 1791 aa27.51■■□□□ 1.99
ECHDC1-203ENST00000368291 DEFB115Q30KQ5 88 aa27.5■■□□□ 1.99
ECHDC1-203ENST00000368291 SPTY2D1Q68D10 685 aaPredicted RBP27.49■■□□□ 1.99
ECHDC1-203ENST00000368291 DOCK2Q92608 1830 aa27.49■■□□□ 1.99
ECHDC1-203ENST00000368291 MAST2Q6P0Q8 1798 aa27.49■■□□□ 1.99
ECHDC1-203ENST00000368291 CYP2E1P05181 493 aaPredicted RBP27.48■■□□□ 1.99
ECHDC1-203ENST00000368291 ZAP70P43403 619 aa27.48■■□□□ 1.99
ECHDC1-203ENST00000368291 ERICH6Q7L0X2 663 aa27.48■■□□□ 1.99
ECHDC1-203ENST00000368291 JMYQ8N9B5 988 aa27.48■■□□□ 1.99
ECHDC1-203ENST00000368291 LRRCC1Q9C099 1032 aa27.48■■□□□ 1.99
ECHDC1-203ENST00000368291 SMARCA5O60264 1052 aaPredicted RBP27.48■■□□□ 1.99
ECHDC1-203ENST00000368291 VEGFBP49765 207 aa27.48■■□□□ 1.99
ECHDC1-203ENST00000368291 C2orf69Q8N8R5 385 aa27.48■■□□□ 1.99
ECHDC1-203ENST00000368291 PPP2R3BQ9Y5P8 575 aa27.48■■□□□ 1.99
ECHDC1-203ENST00000368291 GAKO14976 1311 aa27.47■■□□□ 1.99
ECHDC1-203ENST00000368291 SSC5DA1L4H1 1573 aa27.47■■□□□ 1.99
ECHDC1-203ENST00000368291 CACNB3P54284 484 aa27.47■■□□□ 1.99
ECHDC1-203ENST00000368291 MECOMQ03112 1051 aa27.47■■□□□ 1.99
ECHDC1-203ENST00000368291 RASA3Q14644 834 aa27.47■■□□□ 1.99
ECHDC1-203ENST00000368291 DZIP1Q86YF9 867 aaKnown RBP27.47■■□□□ 1.99
ECHDC1-203ENST00000368291 EXOC6Q8TAG9 804 aa27.47■■□□□ 1.99
ECHDC1-203ENST00000368291 HHIPL1Q96JK4 782 aa27.47■■□□□ 1.99
ECHDC1-203ENST00000368291 TCP10L2B9ZVM9 353 aa27.46■■□□□ 1.99
ECHDC1-203ENST00000368291 NSUN4Q96CB9 384 aaKnown RBP27.46■■□□□ 1.99
ECHDC1-203ENST00000368291 FAM163AQ96GL9 167 aaPredicted RBP27.46■■□□□ 1.99
ECHDC1-203ENST00000368291 BCL11AQ9H165 835 aa27.46■■□□□ 1.99
ECHDC1-203ENST00000368291 IFIT2P09913 472 aaKnown RBP27.45■■□□□ 1.98
ECHDC1-203ENST00000368291 HUNKP57058 714 aa27.45■■□□□ 1.98
ECHDC1-203ENST00000368291 CDC42EP5Q6NZY7 148 aa27.45■■□□□ 1.98
ECHDC1-203ENST00000368291 MOB2Q70IA6 237 aa27.45■■□□□ 1.98
ECHDC1-203ENST00000368291 NDUFB9Q9Y6M9 179 aa27.45■■□□□ 1.98
ECHDC1-203ENST00000368291 PCNTO95613 3336 aa27.45■■□□□ 1.98
ECHDC1-203ENST00000368291 AAMPQ13685 434 aa27.44■■□□□ 1.98
ECHDC1-203ENST00000368291 TNFAIP1Q13829 316 aa27.44■■□□□ 1.98
ECHDC1-203ENST00000368291 CYP4F22Q6NT55 531 aa27.44■■□□□ 1.98
ECHDC1-203ENST00000368291 PIH1D3Q9NQM4 214 aaKnown RBP27.44■■□□□ 1.98
ECHDC1-203ENST00000368291 THSD7BQ9C0I4 1608 aa27.44■■□□□ 1.98
ECHDC1-203ENST00000368291 FKBP1BP68106 108 aa27.43■■□□□ 1.98
ECHDC1-203ENST00000368291 NBPF12Q5TAG4 269 aaPredicted RBP27.43■■□□□ 1.98
ECHDC1-203ENST00000368291 CDAN1Q8IWY9 1227 aa27.43■■□□□ 1.98
ECHDC1-203ENST00000368291 TEPSINQ96N21 525 aa27.43■■□□□ 1.98
ECHDC1-203ENST00000368291 LRP2BPQ9P2M1 347 aa27.43■■□□□ 1.98
ECHDC1-203ENST00000368291 AK9Q5TCS8 1911 aa27.42■■□□□ 1.98
ECHDC1-203ENST00000368291 MROH7-TTC4A0A0A0MT08 1334 aa27.42■■□□□ 1.98
ECHDC1-203ENST00000368291 WDR33Q9C0J8 1336 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms