RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 DZIP1LQ8IYY4 767 aaKnown RBP17■□□□□ 0.31
PMF1-202ENST00000368277 TMEM39BQ9GZU3 492 aa17■□□□□ 0.31
PMF1-202ENST00000368277 SMC4Q9NTJ3 1288 aa17■□□□□ 0.31
PMF1-202ENST00000368277 MYH2Q9UKX2 1941 aa17■□□□□ 0.31
PMF1-202ENST00000368277 PDE8BO95263 885 aa16.99■□□□□ 0.31
PMF1-202ENST00000368277 RFX5P48382 616 aaPredicted RBP16.99■□□□□ 0.31
PMF1-202ENST00000368277 CNKSR2Q8WXI2 1034 aa16.99■□□□□ 0.31
PMF1-202ENST00000368277 TEPSINQ96N21 525 aa16.99■□□□□ 0.31
PMF1-202ENST00000368277 ELP3Q9H9T3 547 aa16.99■□□□□ 0.31
PMF1-202ENST00000368277 HTTP42858 3142 aa16.98■□□□□ 0.31
PMF1-202ENST00000368277 FRAT2O75474 233 aaPredicted RBP16.98■□□□□ 0.31
PMF1-202ENST00000368277 SUPT20HL1Q3ZLR7 823 aa16.98■□□□□ 0.31
PMF1-202ENST00000368277 IFNL1Q8IU54 200 aa16.98■□□□□ 0.31
PMF1-202ENST00000368277 SERPINA10Q9UK55 444 aa16.98■□□□□ 0.31
PMF1-202ENST00000368277 MANSC4A6NHS7 340 aaPredicted RBP16.97■□□□□ 0.31
PMF1-202ENST00000368277 IREB2P48200 963 aaKnown RBP16.97■□□□□ 0.31
PMF1-202ENST00000368277 SIL1Q9H173 461 aa16.97■□□□□ 0.31
PMF1-202ENST00000368277 DOCK2Q92608 1830 aa16.96■□□□□ 0.31
PMF1-202ENST00000368277 FKTNO75072 461 aa16.96■□□□□ 0.31
PMF1-202ENST00000368277 FGFR2P21802 821 aa16.96■□□□□ 0.31
PMF1-202ENST00000368277 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.31
PMF1-202ENST00000368277 CENPFP49454 3210 aa16.96■□□□□ 0.31
PMF1-202ENST00000368277 EYA2O00167 538 aa16.95■□□□□ 0.3
PMF1-202ENST00000368277 ZBTB48P10074 688 aaPredicted RBP16.95■□□□□ 0.3
PMF1-202ENST00000368277 TNFAIP1Q13829 316 aa16.95■□□□□ 0.3
PMF1-202ENST00000368277 PUM3Q15397 648 aaKnown RBP16.95■□□□□ 0.3
PMF1-202ENST00000368277 ALDH1L2Q3SY69 923 aa16.95■□□□□ 0.3
PMF1-202ENST00000368277 ANKRD13AQ8IZ07 590 aa16.95■□□□□ 0.3
PMF1-202ENST00000368277 OPTNQ96CV9 577 aa16.95■□□□□ 0.3
PMF1-202ENST00000368277 NOB1Q9ULX3 412 aaKnown RBP16.95■□□□□ 0.3
PMF1-202ENST00000368277 CAP1Q01518 475 aa16.94■□□□□ 0.3
PMF1-202ENST00000368277 CRHR2Q13324 411 aa16.94■□□□□ 0.3
PMF1-202ENST00000368277 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.94■□□□□ 0.3
PMF1-202ENST00000368277 ATG9AQ7Z3C6 839 aa16.94■□□□□ 0.3
PMF1-202ENST00000368277 TRMT2AQ8IZ69 625 aaKnown RBP16.94■□□□□ 0.3
PMF1-202ENST00000368277 PTPN18Q99952 460 aa16.94■□□□□ 0.3
PMF1-202ENST00000368277 CFHR5Q9BXR6 569 aa16.94■□□□□ 0.3
PMF1-202ENST00000368277 PA2G4Q9UQ80 394 aaKnown RBP16.94■□□□□ 0.3
PMF1-202ENST00000368277 RBBP6Q7Z6E9 1792 aaKnown RBP16.93■□□□□ 0.3
PMF1-202ENST00000368277 IFIT1P09914 478 aaKnown RBP16.93■□□□□ 0.3
PMF1-202ENST00000368277 VGLL4Q14135 290 aa16.93■□□□□ 0.3
PMF1-202ENST00000368277 TEKT1Q969V4 418 aa16.93■□□□□ 0.3
PMF1-202ENST00000368277 LRRFIP2Q9Y608 721 aaKnown RBP16.93■□□□□ 0.3
PMF1-202ENST00000368277 UBTFL1P0CB47 393 aaPredicted RBP16.92■□□□□ 0.3
PMF1-202ENST00000368277 SLC5A1P13866 664 aa16.92■□□□□ 0.3
PMF1-202ENST00000368277 NOM1Q5C9Z4 860 aaKnown RBP16.92■□□□□ 0.3
PMF1-202ENST00000368277 FBXO46Q6PJ61 603 aaPredicted RBP16.92■□□□□ 0.3
PMF1-202ENST00000368277 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.92■□□□□ 0.3
PMF1-202ENST00000368277 CD99L2Q8TCZ2 262 aa16.92■□□□□ 0.3
PMF1-202ENST00000368277 TBC1D22AQ8WUA7 517 aa16.92■□□□□ 0.3
PMF1-202ENST00000368277 OTUD5Q96G74 571 aa16.92■□□□□ 0.3
PMF1-202ENST00000368277 TRIM17Q9Y577 477 aa16.92■□□□□ 0.3
PMF1-202ENST00000368277 ALDH1A1P00352 501 aa16.91■□□□□ 0.3
PMF1-202ENST00000368277 TNNI2P48788 182 aa16.91■□□□□ 0.3
PMF1-202ENST00000368277 DIXDC1Q155Q3 683 aa16.91■□□□□ 0.3
PMF1-202ENST00000368277 APOBEC3HQ6NTF7 200 aaKnown RBP16.91■□□□□ 0.3
PMF1-202ENST00000368277 MEIS3Q99687 375 aa16.91■□□□□ 0.3
PMF1-202ENST00000368277 TNNQ9UQP3 1299 aa16.91■□□□□ 0.3
PMF1-202ENST00000368277 PKN2Q16513 984 aaKnown RBP16.9■□□□□ 0.3
PMF1-202ENST00000368277 OTOP1Q7RTM1 612 aa16.9■□□□□ 0.3
PMF1-202ENST00000368277 BRI3BPQ8WY22 251 aa16.9■□□□□ 0.3
PMF1-202ENST00000368277 LPIN2Q92539 896 aa16.9■□□□□ 0.3
PMF1-202ENST00000368277 MS4A4AQ96JQ5 239 aa16.9■□□□□ 0.3
PMF1-202ENST00000368277 ZDHHC15Q96MV8 337 aa16.9■□□□□ 0.3
PMF1-202ENST00000368277 MYO5AQ9Y4I1 1855 aaKnown RBP16.9■□□□□ 0.3
PMF1-202ENST00000368277 PRDX5P30044 214 aa16.89■□□□□ 0.29
PMF1-202ENST00000368277 ADORA1P30542 326 aa16.89■□□□□ 0.29
PMF1-202ENST00000368277 PHKA1P46020 1223 aa16.89■□□□□ 0.29
PMF1-202ENST00000368277 INHBEP58166 350 aa16.89■□□□□ 0.29
PMF1-202ENST00000368277 MAP3K9P80192 1104 aa16.89■□□□□ 0.29
PMF1-202ENST00000368277 HDLBPQ00341 1268 aaKnown RBP16.89■□□□□ 0.29
PMF1-202ENST00000368277 ATP2B3Q16720 1220 aa16.89■□□□□ 0.29
PMF1-202ENST00000368277 ZKSCAN4Q969J2 545 aaPredicted RBP16.89■□□□□ 0.29
PMF1-202ENST00000368277 SNCAIPQ9Y6H5 919 aa16.89■□□□□ 0.29
PMF1-202ENST00000368277 PTPRFP10586 1907 aa16.89■□□□□ 0.29
PMF1-202ENST00000368277 KIF16BQ96L93 1317 aa16.89■□□□□ 0.29
PMF1-202ENST00000368277 KIAA0100Q14667 2235 aaKnown RBP16.89■□□□□ 0.29
PMF1-202ENST00000368277 BRCA2P51587 3418 aa16.88■□□□□ 0.29
PMF1-202ENST00000368277 CCL15-CCL14A0A0B4J2E2 113 aa16.88■□□□□ 0.29
PMF1-202ENST00000368277 TESPA1A2RU30 521 aaPredicted RBP16.88■□□□□ 0.29
PMF1-202ENST00000368277 UNCXA6NJT0 531 aa16.88■□□□□ 0.29
PMF1-202ENST00000368277 CCL15Q16663 113 aa16.88■□□□□ 0.29
PMF1-202ENST00000368277 MIGA2Q7L4E1 593 aa16.88■□□□□ 0.29
PMF1-202ENST00000368277 WRNIP1Q96S55 665 aa16.88■□□□□ 0.29
PMF1-202ENST00000368277 TMOD2Q9NZR1 351 aa16.88■□□□□ 0.29
PMF1-202ENST00000368277 DAGLAQ9Y4D2 1042 aa16.88■□□□□ 0.29
PMF1-202ENST00000368277 CSADQ9Y600 493 aa16.88■□□□□ 0.29
PMF1-202ENST00000368277 PHIPQ8WWQ0 1821 aa16.87■□□□□ 0.29
PMF1-202ENST00000368277 MGAMO43451 1857 aa16.87■□□□□ 0.29
PMF1-202ENST00000368277 ECM2O94769 699 aaPredicted RBP16.87■□□□□ 0.29
PMF1-202ENST00000368277 RARSP54136 660 aaKnown RBP16.87■□□□□ 0.29
PMF1-202ENST00000368277 TCP10Q12799 353 aa16.87■□□□□ 0.29
PMF1-202ENST00000368277 NFIAQ12857 509 aa16.87■□□□□ 0.29
PMF1-202ENST00000368277 FAM43AQ8N2R8 423 aa16.87■□□□□ 0.29
PMF1-202ENST00000368277 API5Q9BZZ5 524 aaKnown RBP16.87■□□□□ 0.29
PMF1-202ENST00000368277 MAST3O60307 1309 aa16.87■□□□□ 0.29
PMF1-202ENST00000368277 ATAD5Q96QE3 1844 aa16.86■□□□□ 0.29
PMF1-202ENST00000368277 DOCK1Q14185 1865 aa16.86■□□□□ 0.29
PMF1-202ENST00000368277 INPP5BP32019 993 aa16.86■□□□□ 0.29
PMF1-202ENST00000368277 TAF1CQ15572 869 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms