RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.55■■■□□ 2.32
PFDN2-201ENST00000368010 MYH13Q9UKX3 1938 aa29.55■■■□□ 2.32
PFDN2-201ENST00000368010 ZBTB22O15209 634 aa29.54■■■□□ 2.32
PFDN2-201ENST00000368010 TEKT1Q969V4 418 aa29.54■■■□□ 2.32
PFDN2-201ENST00000368010 DEFB129Q9H1M3 183 aa29.54■■■□□ 2.32
PFDN2-201ENST00000368010 ECM29Q5VYK3 1845 aa29.54■■■□□ 2.32
PFDN2-201ENST00000368010 THSD7BQ9C0I4 1608 aa29.53■■■□□ 2.32
PFDN2-201ENST00000368010 AOX1Q06278 1338 aa29.53■■■□□ 2.32
PFDN2-201ENST00000368010 YTHDC1Q96MU7 727 aaKnown RBP29.53■■■□□ 2.32
PFDN2-201ENST00000368010 CHMP4BQ9H444 224 aaKnown RBP29.53■■■□□ 2.32
PFDN2-201ENST00000368010 PPP2R3BQ9Y5P8 575 aa29.53■■■□□ 2.32
PFDN2-201ENST00000368010 PAPPA2Q9BXP8 1791 aa29.53■■■□□ 2.32
PFDN2-201ENST00000368010 PDE3AQ14432 1141 aa29.52■■■□□ 2.32
PFDN2-201ENST00000368010 RGMBQ6NW40 437 aa29.52■■■□□ 2.32
PFDN2-201ENST00000368010 NOP58Q9Y2X3 529 aaKnown RBP29.52■■■□□ 2.32
PFDN2-201ENST00000368010 SPDYE2Q495Y8 402 aa29.51■■■□□ 2.31
PFDN2-201ENST00000368010 GORABQ5T7V8 394 aa29.51■■■□□ 2.31
PFDN2-201ENST00000368010 MRIQ9BWK5 157 aa29.51■■■□□ 2.31
PFDN2-201ENST00000368010 TDRD3Q9H7E2 651 aaKnown RBP29.51■■■□□ 2.31
PFDN2-201ENST00000368010 SALL1Q9NSC2 1324 aa29.5■■■□□ 2.31
PFDN2-201ENST00000368010 MAP2K2P36507 400 aa29.5■■■□□ 2.31
PFDN2-201ENST00000368010 MAP2K1Q02750 393 aaPredicted RBP29.5■■■□□ 2.31
PFDN2-201ENST00000368010 RASGRF1Q13972 1273 aa29.5■■■□□ 2.31
PFDN2-201ENST00000368010 AIDAQ96BJ3 306 aa29.5■■■□□ 2.31
PFDN2-201ENST00000368010 GPR108Q9NPR9 543 aa29.5■■■□□ 2.31
PFDN2-201ENST00000368010 ZNF70Q9UC06 446 aaPredicted RBP29.5■■■□□ 2.31
PFDN2-201ENST00000368010 AOC2O75106 756 aa29.49■■■□□ 2.31
PFDN2-201ENST00000368010 TNFAIP1Q13829 316 aa29.49■■■□□ 2.31
PFDN2-201ENST00000368010 TTLL12Q14166 644 aaPredicted RBP29.49■■■□□ 2.31
PFDN2-201ENST00000368010 ZDHHC15Q96MV8 337 aa29.49■■■□□ 2.31
PFDN2-201ENST00000368010 ZBTB40Q9NUA8 1239 aa29.49■■■□□ 2.31
PFDN2-201ENST00000368010 PDS5AQ29RF7 1337 aaKnown RBP29.48■■■□□ 2.31
PFDN2-201ENST00000368010 ZNF157P51786 506 aaPredicted RBP29.48■■■□□ 2.31
PFDN2-201ENST00000368010 HHIPL2Q6UWX4 724 aa29.48■■■□□ 2.31
PFDN2-201ENST00000368010 ZGPATQ8N5A5 531 aaKnown RBP29.48■■■□□ 2.31
PFDN2-201ENST00000368010 CCDC102AQ96A19 550 aa29.48■■■□□ 2.31
PFDN2-201ENST00000368010 WBP1LQ9NX94 342 aa29.48■■■□□ 2.31
PFDN2-201ENST00000368010 LDHBP07195 334 aaKnown RBP29.47■■■□□ 2.31
PFDN2-201ENST00000368010 PRDX5P30044 214 aa29.47■■■□□ 2.31
PFDN2-201ENST00000368010 NOGQ13253 232 aa29.47■■■□□ 2.31
PFDN2-201ENST00000368010 TNNI3KQ59H18 835 aa29.47■■■□□ 2.31
PFDN2-201ENST00000368010 C20orf194Q5TEA3 1177 aa29.47■■■□□ 2.31
PFDN2-201ENST00000368010 FPGT-TNNI3KV9GXZ4 949 aa29.47■■■□□ 2.31
PFDN2-201ENST00000368010 RASA3Q14644 834 aa29.46■■■□□ 2.31
PFDN2-201ENST00000368010 MOB2Q70IA6 237 aa29.46■■■□□ 2.31
PFDN2-201ENST00000368010 RPAP2Q8IXW5 612 aaPredicted RBP29.46■■■□□ 2.31
PFDN2-201ENST00000368010 ARMC9Q7Z3E5 817 aa29.45■■■□□ 2.31
PFDN2-201ENST00000368010 UBE2Q2LH0YL09 131 aa29.44■■■□□ 2.3
PFDN2-201ENST00000368010 TNNI2P48788 182 aa29.44■■■□□ 2.3
PFDN2-201ENST00000368010 SUPT20HL1Q3ZLR7 823 aa29.44■■■□□ 2.3
PFDN2-201ENST00000368010 TMOD2Q9NZR1 351 aa29.44■■■□□ 2.3
PFDN2-201ENST00000368010 PCNTO95613 3336 aa29.43■■■□□ 2.3
PFDN2-201ENST00000368010 FAM155AB1AL88 458 aaPredicted RBP29.43■■■□□ 2.3
PFDN2-201ENST00000368010 HMMRO75330 724 aa29.43■■■□□ 2.3
PFDN2-201ENST00000368010 PRKG1Q13976 671 aa29.43■■■□□ 2.3
PFDN2-201ENST00000368010 APOBEC3HQ6NTF7 200 aaKnown RBP29.43■■■□□ 2.3
PFDN2-201ENST00000368010 ERC1Q8IUD2 1116 aa29.43■■■□□ 2.3
PFDN2-201ENST00000368010 BEGAINQ9BUH8 593 aa29.43■■■□□ 2.3
PFDN2-201ENST00000368010 ABCF2Q9UG63 623 aa29.43■■■□□ 2.3
PFDN2-201ENST00000368010 EXOC6BQ9Y2D4 811 aa29.43■■■□□ 2.3
PFDN2-201ENST00000368010 TCP10L2B9ZVM9 353 aa29.42■■■□□ 2.3
PFDN2-201ENST00000368010 FOXN1O15353 648 aa29.42■■■□□ 2.3
PFDN2-201ENST00000368010 SLC10A3P09131 477 aa29.42■■■□□ 2.3
PFDN2-201ENST00000368010 UQCRFS1P1P0C7P4 283 aa29.42■■■□□ 2.3
PFDN2-201ENST00000368010 ARID4AP29374 1257 aaPredicted RBP29.42■■■□□ 2.3
PFDN2-201ENST00000368010 DIXDC1Q155Q3 683 aa29.42■■■□□ 2.3
PFDN2-201ENST00000368010 HSP90AB4PQ58FF6 505 aa29.42■■■□□ 2.3
PFDN2-201ENST00000368010 HMG20BQ9P0W2 317 aa29.42■■■□□ 2.3
PFDN2-201ENST00000368010 SSC5DA1L4H1 1573 aa29.41■■■□□ 2.3
PFDN2-201ENST00000368010 NBPF12Q5TAG4 269 aaPredicted RBP29.41■■■□□ 2.3
PFDN2-201ENST00000368010 SPTY2D1Q68D10 685 aaPredicted RBP29.41■■■□□ 2.3
PFDN2-201ENST00000368010 SPATA5Q8NB90 893 aa29.41■■■□□ 2.3
PFDN2-201ENST00000368010 DBNDD2Q9BQY9 259 aa29.41■■■□□ 2.3
PFDN2-201ENST00000368010 ANGEL1Q9UNK9 670 aaKnown RBP29.41■■■□□ 2.3
PFDN2-201ENST00000368010 DAGLAQ9Y4D2 1042 aa29.41■■■□□ 2.3
PFDN2-201ENST00000368010 PPP1R12BO60237 982 aaPredicted RBP29.4■■■□□ 2.3
PFDN2-201ENST00000368010 CCDC158Q5M9N0 1113 aa29.4■■■□□ 2.3
PFDN2-201ENST00000368010 DZIP1Q86YF9 867 aaKnown RBP29.4■■■□□ 2.3
PFDN2-201ENST00000368010 RASAL3Q86YV0 1011 aa29.4■■■□□ 2.3
PFDN2-201ENST00000368010 CTCFP49711 727 aaPredicted RBP29.39■■■□□ 2.3
PFDN2-201ENST00000368010 CACNB3P54284 484 aa29.39■■■□□ 2.3
PFDN2-201ENST00000368010 TTC39AQ5SRH9 613 aa29.39■■■□□ 2.3
PFDN2-201ENST00000368010 FKBP1CQ5VVH2 108 aa29.38■■■□□ 2.29
PFDN2-201ENST00000368010 PI16Q6UXB8 463 aa29.38■■■□□ 2.29
PFDN2-201ENST00000368010 ZIC5Q96T25 663 aa29.38■■■□□ 2.29
PFDN2-201ENST00000368010 MCAMP43121 646 aa29.37■■■□□ 2.29
PFDN2-201ENST00000368010 ERICH6Q7L0X2 663 aa29.37■■■□□ 2.29
PFDN2-201ENST00000368010 SLF2Q8IX21 1173 aa29.37■■■□□ 2.29
PFDN2-201ENST00000368010 SIRT2Q8IXJ6 389 aa29.37■■■□□ 2.29
PFDN2-201ENST00000368010 EAF2Q96CJ1 260 aaPredicted RBP29.37■■■□□ 2.29
PFDN2-201ENST00000368010 TMEM39BQ9GZU3 492 aa29.37■■■□□ 2.29
PFDN2-201ENST00000368010 DBNLQ9UJU6 430 aaKnown RBP29.37■■■□□ 2.29
PFDN2-201ENST00000368010 FZD1Q9UP38 647 aa29.37■■■□□ 2.29
PFDN2-201ENST00000368010 KIF23Q02241 960 aaPredicted RBP29.36■■■□□ 2.29
PFDN2-201ENST00000368010 MAP3K11Q16584 847 aa29.36■■■□□ 2.29
PFDN2-201ENST00000368010 LDLRAD1Q5T700 205 aa29.36■■■□□ 2.29
PFDN2-201ENST00000368010 FAM83AQ86UY5 434 aa29.36■■■□□ 2.29
PFDN2-201ENST00000368010 TEPSINQ96N21 525 aa29.36■■■□□ 2.29
PFDN2-201ENST00000368010 ZNF512BQ96KM6 892 aaPredicted RBP29.35■■■□□ 2.29
PFDN2-201ENST00000368010 CCDC8Q9H0W5 538 aaPredicted RBP29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms