RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 SAMM50Q9Y512 469 aa13.35□□□□□ -0.27
PRKN-206ENST00000366898 PLEKHG1Q9ULL1 1385 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 TXLNAP40222 546 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 SAFBQ15424 915 aaKnown RBP eCLIP13.34□□□□□ -0.27
PRKN-206ENST00000366898 BICC1Q9H694 974 aaKnown RBP13.34□□□□□ -0.27
PRKN-206ENST00000366898 RAD50Q92878 1312 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 CCDC160A6NGH7 325 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 TUBB4AP04350 444 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 DDX46Q7L014 1031 aaKnown RBP13.34□□□□□ -0.27
PRKN-206ENST00000366898 SRLQ86TD4 932 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
PRKN-206ENST00000366898 TOM1O60784 492 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 PAFAH1B1P43034 410 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 PSMD2Q13200 908 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 NFXL1Q6ZNB6 911 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 TADA2BQ86TJ2 420 aa13.34□□□□□ -0.27
PRKN-206ENST00000366898 COL3A1P02461 1466 aaPredicted RBP13.34□□□□□ -0.27
PRKN-206ENST00000366898 SIGLEC1Q9BZZ2 1709 aa13.33□□□□□ -0.27
PRKN-206ENST00000366898 CTAGE9A4FU28 777 aa13.33□□□□□ -0.27
PRKN-206ENST00000366898 OPA1O60313 960 aa13.33□□□□□ -0.27
PRKN-206ENST00000366898 AK2P54819 239 aa13.33□□□□□ -0.27
PRKN-206ENST00000366898 ST5P78524 1137 aa13.33□□□□□ -0.27
PRKN-206ENST00000366898 CCDC6Q16204 474 aa13.33□□□□□ -0.27
PRKN-206ENST00000366898 JMYQ8N9B5 988 aa13.33□□□□□ -0.27
PRKN-206ENST00000366898 EXOC4Q96A65 974 aa13.33□□□□□ -0.27
PRKN-206ENST00000366898 CABS1Q96KC9 395 aa13.33□□□□□ -0.27
PRKN-206ENST00000366898 SNRKQ9NRH2 765 aa13.33□□□□□ -0.27
PRKN-206ENST00000366898 RIPOR2Q9Y4F9 1068 aa13.33□□□□□ -0.27
PRKN-206ENST00000366898 PREX1Q8TCU6 1659 aa13.33□□□□□ -0.28
PRKN-206ENST00000366898 TPX2Q9ULW0 747 aaKnown RBP13.33□□□□□ -0.28
PRKN-206ENST00000366898 NLRP1Q9C000 1473 aa13.33□□□□□ -0.28
PRKN-206ENST00000366898 MYO5BQ9ULV0 1848 aa13.33□□□□□ -0.28
PRKN-206ENST00000366898 HGSO14964 777 aaPredicted RBP13.33□□□□□ -0.28
PRKN-206ENST00000366898 HPDP32754 393 aaPredicted RBP13.33□□□□□ -0.28
PRKN-206ENST00000366898 DBN1Q16643 649 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 ANKRD13DQ6ZTN6 518 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 YY1AP1Q9H869 796 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 TMEM131LA2VDJ0 1609 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 NUP88Q99567 741 aaPredicted RBP13.32□□□□□ -0.28
PRKN-206ENST00000366898 FAM204AQ9H8W3 233 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 MED14O60244 1454 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 ARHGAP25P42331 645 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 TRDNQ13061 729 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 GPR161Q8N6U8 529 aaKnown RBP13.32□□□□□ -0.28
PRKN-206ENST00000366898 FAM227BQ96M60 508 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 PSMD1Q99460 953 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 SHPRHQ149N8 1683 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
PRKN-206ENST00000366898 RICTORQ6R327 1708 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 ETF1P62495 437 aaKnown RBP13.32□□□□□ -0.28
PRKN-206ENST00000366898 SPECC1LQ69YQ0 1117 aa13.32□□□□□ -0.28
PRKN-206ENST00000366898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.32□□□□□ -0.28
PRKN-206ENST00000366898 SH2B1Q9NRF2 756 aaPredicted RBP13.32□□□□□ -0.28
PRKN-206ENST00000366898 GNGT1P63211 74 aa13.31□□□□□ -0.28
PRKN-206ENST00000366898 SUCLG2Q96I99 432 aa13.31□□□□□ -0.28
PRKN-206ENST00000366898 HINFPQ9BQA5 517 aa13.31□□□□□ -0.28
PRKN-206ENST00000366898 RBM8AQ9Y5S9 174 aaKnown RBP13.31□□□□□ -0.28
PRKN-206ENST00000366898 NMIQ13287 307 aaPredicted RBP13.31□□□□□ -0.28
PRKN-206ENST00000366898 SEC62Q99442 399 aaKnown RBP13.31□□□□□ -0.28
PRKN-206ENST00000366898 DACH1Q9UI36 760 aa13.31□□□□□ -0.28
PRKN-206ENST00000366898 ACTN3Q08043 901 aaPredicted RBP13.31□□□□□ -0.28
PRKN-206ENST00000366898 SYCP1Q15431 976 aa13.31□□□□□ -0.28
PRKN-206ENST00000366898 LONRF2Q1L5Z9 754 aa13.31□□□□□ -0.28
PRKN-206ENST00000366898 IFNL2Q8IZJ0 200 aa13.31□□□□□ -0.28
PRKN-206ENST00000366898 ANKRD62A6NC57 917 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 TRIM68Q6AZZ1 485 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 RALYLQ86SE5 291 aaKnown RBP13.3□□□□□ -0.28
PRKN-206ENST00000366898 RAB11FIP4Q86YS3 637 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 LRRC8AQ8IWT6 810 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 MAGEC2Q9UBF1 373 aaPredicted RBP13.3□□□□□ -0.28
PRKN-206ENST00000366898 LMTK3Q96Q04 1460 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 IBTKQ9P2D0 1353 aaPredicted RBP13.3□□□□□ -0.28
PRKN-206ENST00000366898 NPHP3Q7Z494 1330 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 FBF1Q8TES7 1133 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 EPC1Q9H2F5 836 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 GPTP24298 496 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 ZKSCAN8Q15776 578 aaPredicted RBP13.3□□□□□ -0.28
PRKN-206ENST00000366898 WHAMMP3Q1A5X7 153 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 EVI5LQ96CN4 794 aa13.3□□□□□ -0.28
PRKN-206ENST00000366898 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.3□□□□□ -0.28
PRKN-206ENST00000366898 STIM1Q13586 685 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 IMMTQ16891 758 aaKnown RBP13.29□□□□□ -0.28
PRKN-206ENST00000366898 LMBR1LQ6UX01 489 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 ANKRD7Q92527 254 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 GOPCQ9HD26 462 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 SMIM24O75264 130 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 BRD1O95696 1058 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 ATP1A2P50993 1020 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 BEND3Q5T5X7 828 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 SSH3Q8TE77 659 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 ZNF496Q96IT1 587 aaPredicted RBP13.29□□□□□ -0.28
PRKN-206ENST00000366898 SPTLC3Q9NUV7 552 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 POLR3DP05423 398 aaPredicted RBP13.29□□□□□ -0.28
PRKN-206ENST00000366898 RANBP1P43487 201 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 ZNF790Q6PG37 636 aa13.29□□□□□ -0.28
PRKN-206ENST00000366898 RNF168Q8IYW5 571 aaPredicted RBP13.29□□□□□ -0.28
PRKN-206ENST00000366898 HIP1O00291 1037 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 GIGYF1O75420 1035 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms