RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 CCDC141Q6ZP82 1450 aa11.48□□□□□ -0.57
H3F3A-201ENST00000366813 ATRNO75882 1429 aa11.48□□□□□ -0.57
H3F3A-201ENST00000366813 NCOA3Q9Y6Q9 1424 aa11.48□□□□□ -0.57
H3F3A-201ENST00000366813 NHSL1Q5SYE7 1610 aa11.48□□□□□ -0.57
H3F3A-201ENST00000366813 EFCAB6Q5THR3 1501 aa11.47□□□□□ -0.57
H3F3A-201ENST00000366813 XYLBO75191 536 aa11.47□□□□□ -0.57
H3F3A-201ENST00000366813 NRG1Q02297 640 aaPredicted RBP11.47□□□□□ -0.57
H3F3A-201ENST00000366813 SF3B2Q13435 895 aaKnown RBP11.47□□□□□ -0.57
H3F3A-201ENST00000366813 CARNS1A5YM72 827 aa11.46□□□□□ -0.57
H3F3A-201ENST00000366813 ZBTB42B2RXF5 422 aa11.46□□□□□ -0.57
H3F3A-201ENST00000366813 PERM1Q5SV97 790 aa11.46□□□□□ -0.57
H3F3A-201ENST00000366813 MSL1Q68DK7 614 aa11.46□□□□□ -0.57
H3F3A-201ENST00000366813 HFE2Q6ZVN8 426 aa11.46□□□□□ -0.57
H3F3A-201ENST00000366813 FRRS1LQ9P0K9 344 aa11.46□□□□□ -0.57
H3F3A-201ENST00000366813 ASXL1Q8IXJ9 1541 aa11.46□□□□□ -0.58
H3F3A-201ENST00000366813 BCL9LQ86UU0 1499 aa11.45□□□□□ -0.58
H3F3A-201ENST00000366813 CEP152O94986 1710 aa11.45□□□□□ -0.58
H3F3A-201ENST00000366813 SELPP16109 830 aa11.45□□□□□ -0.58
H3F3A-201ENST00000366813 BRD2P25440 801 aaKnown RBP11.45□□□□□ -0.58
H3F3A-201ENST00000366813 RSPO4Q2I0M5 234 aaPredicted RBP11.45□□□□□ -0.58
H3F3A-201ENST00000366813 LENG1Q96BZ8 264 aaPredicted RBP11.45□□□□□ -0.58
H3F3A-201ENST00000366813 CHD2O14647 1828 aaKnown RBP11.45□□□□□ -0.58
H3F3A-201ENST00000366813 MROH1Q8NDA8 1641 aa11.45□□□□□ -0.58
H3F3A-201ENST00000366813 TSPY4P0CV99 314 aa11.44□□□□□ -0.58
H3F3A-201ENST00000366813 TSPY10P0CW01 314 aa11.44□□□□□ -0.58
H3F3A-201ENST00000366813 GPLD1P80108 840 aa11.44□□□□□ -0.58
H3F3A-201ENST00000366813 C16orf46Q6P387 395 aa11.44□□□□□ -0.58
H3F3A-201ENST00000366813 WFDC8Q8IUA0 241 aa11.44□□□□□ -0.58
H3F3A-201ENST00000366813 FMR1NBQ8N0W7 255 aaPredicted RBP11.44□□□□□ -0.58
H3F3A-201ENST00000366813 LPIN3Q9BQK8 851 aa11.44□□□□□ -0.58
H3F3A-201ENST00000366813 TLR7Q9NYK1 1049 aaKnown RBP11.44□□□□□ -0.58
H3F3A-201ENST00000366813 EGFRP00533 1210 aa11.43□□□□□ -0.58
H3F3A-201ENST00000366813 PSAPP07602 524 aa11.43□□□□□ -0.58
H3F3A-201ENST00000366813 EIF2AK2P19525 551 aaKnown RBP11.43□□□□□ -0.58
H3F3A-201ENST00000366813 R3HDM1Q15032 1099 aaKnown RBP11.43□□□□□ -0.58
H3F3A-201ENST00000366813 NKAPLQ5M9Q1 402 aa11.43□□□□□ -0.58
H3F3A-201ENST00000366813 XP32Q5T750 250 aa11.43□□□□□ -0.58
H3F3A-201ENST00000366813 SHISA2Q6UWI4 295 aa11.43□□□□□ -0.58
H3F3A-201ENST00000366813 MTUS2Q5JR59 1369 aa11.43□□□□□ -0.58
H3F3A-201ENST00000366813 ARHGAP31Q2M1Z3 1444 aa11.43□□□□□ -0.58
H3F3A-201ENST00000366813 NRLP54845 237 aa11.42□□□□□ -0.58
H3F3A-201ENST00000366813 ADGRE1Q14246 886 aa11.42□□□□□ -0.58
H3F3A-201ENST00000366813 MBTPS1Q14703 1052 aa11.42□□□□□ -0.58
H3F3A-201ENST00000366813 TXNRD3Q86VQ6 643 aa11.42□□□□□ -0.58
H3F3A-201ENST00000366813 Q8N3U1 123 aa11.42□□□□□ -0.58
H3F3A-201ENST00000366813 SMG9Q9H0W8 520 aaKnown RBP11.42□□□□□ -0.58
H3F3A-201ENST00000366813 TBX22Q9Y458 520 aa11.42□□□□□ -0.58
H3F3A-201ENST00000366813 PLAURQ03405 335 aa11.41□□□□□ -0.58
H3F3A-201ENST00000366813 OCLNQ16625 522 aa11.41□□□□□ -0.58
H3F3A-201ENST00000366813 TTC9Q92623 222 aa11.41□□□□□ -0.58
H3F3A-201ENST00000366813 MKNK1Q9BUB5 465 aa11.41□□□□□ -0.58
H3F3A-201ENST00000366813 SAP130Q9H0E3 1048 aa11.41□□□□□ -0.58
H3F3A-201ENST00000366813 FYCO1Q9BQS8 1478 aa11.41□□□□□ -0.58
H3F3A-201ENST00000366813 PLEKHG1Q9ULL1 1385 aa11.4□□□□□ -0.58
H3F3A-201ENST00000366813 LOC102724428A0A0B4J2F2 783 aa11.4□□□□□ -0.58
H3F3A-201ENST00000366813 SIK1P57059 783 aa11.4□□□□□ -0.58
H3F3A-201ENST00000366813 NAA30Q147X3 362 aaPredicted RBP11.4□□□□□ -0.58
H3F3A-201ENST00000366813 ZMYM1Q5SVZ6 1142 aa11.4□□□□□ -0.58
H3F3A-201ENST00000366813 DTWD1Q8N5C7 304 aa11.4□□□□□ -0.58
H3F3A-201ENST00000366813 RBSNQ9H1K0 784 aa11.4□□□□□ -0.58
H3F3A-201ENST00000366813 J3QW42 95 aa11.39□□□□□ -0.59
H3F3A-201ENST00000366813 GHRHP01286 108 aa11.39□□□□□ -0.59
H3F3A-201ENST00000366813 ITGB7P26010 798 aa11.39□□□□□ -0.59
H3F3A-201ENST00000366813 ETFBKMTQ8IXQ9 262 aa11.39□□□□□ -0.59
H3F3A-201ENST00000366813 CLP1Q92989 425 aaKnown RBP11.39□□□□□ -0.59
H3F3A-201ENST00000366813 COL26A1Q96A83 441 aa11.39□□□□□ -0.59
H3F3A-201ENST00000366813 FAM13BQ9NYF5 915 aa11.39□□□□□ -0.59
H3F3A-201ENST00000366813 MST1RQ04912 1400 aa11.39□□□□□ -0.59
H3F3A-201ENST00000366813 DYRK3O43781 588 aa11.38□□□□□ -0.59
H3F3A-201ENST00000366813 PTCD1O75127 700 aaKnown RBP11.38□□□□□ -0.59
H3F3A-201ENST00000366813 GRIK5Q16478 980 aa11.38□□□□□ -0.59
H3F3A-201ENST00000366813 FBXO11Q86XK2 927 aa11.38□□□□□ -0.59
H3F3A-201ENST00000366813 PIK3R5Q8WYR1 880 aa11.38□□□□□ -0.59
H3F3A-201ENST00000366813 CXXC1Q9P0U4 656 aaPredicted RBP11.38□□□□□ -0.59
H3F3A-201ENST00000366813 KCNMB2Q9Y691 235 aa11.38□□□□□ -0.59
H3F3A-201ENST00000366813 MMP20O60882 483 aa11.37□□□□□ -0.59
H3F3A-201ENST00000366813 PLD4Q96BZ4 506 aa11.37□□□□□ -0.59
H3F3A-201ENST00000366813 NSUN5Q96P11 429 aaKnown RBP11.37□□□□□ -0.59
H3F3A-201ENST00000366813 AMOTL2Q9Y2J4 779 aa11.37□□□□□ -0.59
H3F3A-201ENST00000366813 PTCH1Q13635 1447 aa11.37□□□□□ -0.59
H3F3A-201ENST00000366813 C1QTNF8P60827 252 aa11.36□□□□□ -0.59
H3F3A-201ENST00000366813 NLRP13Q86W25 1043 aa11.36□□□□□ -0.59
H3F3A-201ENST00000366813 TP53INP1Q96A56 240 aa11.36□□□□□ -0.59
H3F3A-201ENST00000366813 ZFYVE9O95405 1425 aa11.36□□□□□ -0.59
H3F3A-201ENST00000366813 EIF2AK4Q9P2K8 1649 aaKnown RBP11.35□□□□□ -0.59
H3F3A-201ENST00000366813 DCCP43146 1447 aa11.35□□□□□ -0.59
H3F3A-201ENST00000366813 GDF6Q6KF10 455 aaPredicted RBP11.35□□□□□ -0.59
H3F3A-201ENST00000366813 CAPN12Q6ZSI9 719 aa11.35□□□□□ -0.59
H3F3A-201ENST00000366813 FNDC3AQ9Y2H6 1198 aaKnown RBP11.35□□□□□ -0.59
H3F3A-201ENST00000366813 ADGRB3O60242 1522 aa11.34□□□□□ -0.59
H3F3A-201ENST00000366813 ADAMTS13Q76LX8 1427 aa11.34□□□□□ -0.59
H3F3A-201ENST00000366813 PTPRUQ92729 1446 aa11.34□□□□□ -0.59
H3F3A-201ENST00000366813 RIMS2Q9UQ26 1411 aa11.34□□□□□ -0.59
H3F3A-201ENST00000366813 RALGAPBQ86X10 1494 aa11.34□□□□□ -0.59
H3F3A-201ENST00000366813 BRD1O95696 1058 aa11.34□□□□□ -0.59
H3F3A-201ENST00000366813 IGF2-ASQ6U949 168 aa11.34□□□□□ -0.59
H3F3A-201ENST00000366813 UNC13BO14795 1591 aa11.33□□□□□ -0.6
H3F3A-201ENST00000366813 SCO2A0A1W2PP80 73 aa11.33□□□□□ -0.6
H3F3A-201ENST00000366813 H2AFB1P0C5Y9 115 aa11.33□□□□□ -0.6
H3F3A-201ENST00000366813 H2AFB2P0C5Z0 115 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms