RNA–Protein interactions for RNA: ENST00000366527.4

HNRNPU-203, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 12,852 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-203ENST00000366527 CDK19Q9BWU1 502 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 RNF41Q9H4P4 317 aaPredicted RBP4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 USO1O60763 962 aaKnown RBP4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 ECE1P42892 770 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 PTPN9P43378 593 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 TTF1Q15361 905 aaPredicted RBP4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 IFI16Q16666 785 aaKnown RBP4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 RAB11FIP4Q86YS3 637 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 ZNF654Q8IZM8 581 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 EIF3DO15371 548 aaKnown RBP eCLIP4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 POLR2BP30876 1174 aaKnown RBP4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 CCDC50Q8IVM0 306 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 SWAP70Q9UH65 585 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 SLC13A4Q9UKG4 626 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 AMOTL2Q9Y2J4 779 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 CCDC194A0A1B0GVG4 234 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 PI4K2BG5E9Z4 385 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 SARNPP82979 210 aaKnown RBP4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 MKRN3Q13064 507 aaKnown RBP4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 PI4K2BQ8TCG2 481 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 KLHL3Q9UH77 587 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 CBFA2T2O43439 604 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 KRT83P78385 493 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 STK3Q13188 491 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 CHST3Q7LGC8 479 aa4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 NAA15Q9BXJ9 866 aaKnown RBP4.38□□□□□ -1.71
HNRNPU-203ENST00000366527 TDRD12Q587J7 1177 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 NSFL1CQ9UNZ2 370 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 NUP155O75694 1391 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 CCDC160A6NGH7 325 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 NONOQ15233 471 aaKnown RBP eCLIP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 CPSF3Q9UKF6 684 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 AP1G2O75843 785 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 TNFAIP1Q13829 316 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 WDR44Q5JSH3 913 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 UBLCP1Q8WVY7 318 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 CWC25Q9NXE8 425 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 NOP58Q9Y2X3 529 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 KDM2BQ8NHM5 1336 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 EFCAB14O75071 495 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 VAMP4O75379 141 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 ALDH1B1P30837 517 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 ATP1A2P50993 1020 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 TOGARAM2Q6ZUX3 1019 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 FAM177A1Q8N128 213 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 SKA1Q96BD8 255 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 PAIP2Q9BPZ3 127 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 PHAXQ9H814 394 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 TEX28O15482 410 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 CCDC40Q4G0X9 1142 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 TRIML1Q8N9V2 468 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 COA7Q96BR5 231 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 EXO5Q9H790 373 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 PTPREP23469 700 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 IFNA8P32881 189 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 CACNB1Q02641 598 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 C16orf62Q7Z3J2 963 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 ABHD8Q96I13 439 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 ARHGAP9Q9BRR9 750 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 TPCN1Q9ULQ1 816 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 CETN3O15182 167 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 BNIP3LO60238 219 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 ELOAQ14241 798 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 ARL13BQ3SXY8 428 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 ABCF3Q9NUQ8 709 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 NEMP1O14524 444 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 ENC1O14682 589 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 ERN1O75460 977 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 KRT9P35527 623 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 CCNA1P78396 465 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 CEP120Q8N960 986 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 EDEM3Q9BZQ6 932 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 PYGMP11217 842 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 GJC1P36383 396 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 PAFAH1B1P43034 410 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 HDAC4P56524 1084 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 STN1Q9H668 368 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 SLC24A3Q9HC58 644 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 FAM50BQ9Y247 325 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 GKAP1Q5VSY0 366 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 ADPGKQ9BRR6 497 aa4.37□□□□□ -1.71
HNRNPU-203ENST00000366527 MTIF2P46199 727 aaKnown RBP4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 RPS6KA2Q15349 733 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 RAB42Q8N4Z0 105 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 ZNF830Q96NB3 372 aaPredicted RBP4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 HAUS8Q9BT25 410 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 CCDC68Q9H2F9 335 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 SUGT1Q9Y2Z0 365 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 WRNQ14191 1432 aaPredicted RBP eCLIP4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 GOLIM4O00461 696 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 SMTNP53814 917 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 RILPL1Q5EBL4 403 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 DPP8Q6V1X1 898 aaPredicted RBP4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 PGBD1Q96JS3 809 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 NSRP1Q9H0G5 558 aaKnown RBP4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 TSHZ2Q9NRE2 1034 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 NIP7Q9Y221 180 aaKnown RBP eCLIP4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 HAUS3Q68CZ6 603 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 FLAD1Q8NFF5 587 aa4.36□□□□□ -1.71
HNRNPU-203ENST00000366527 CRNKL1Q9BZJ0 848 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms