RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 ZKSCAN3Q9BRR0 538 aa5.26□□□□□ -1.57
RNU6-238P-201ENST00000363313 NRSN2Q9GZP1 204 aa5.26□□□□□ -1.57
RNU6-238P-201ENST00000363313 CHRDQ9H2X0 955 aa5.26□□□□□ -1.57
RNU6-238P-201ENST00000363313 ACSS3Q9H6R3 686 aa5.26□□□□□ -1.57
RNU6-238P-201ENST00000363313 CARMIL2Q6F5E8 1435 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 ACPPP15309 386 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 USP5P45974 858 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 SRPK2P78362 688 aaKnown RBP5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 PLCL1Q15111 1095 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 ZNF792Q3KQV3 632 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 CDCA8Q53HL2 280 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 NOM1Q5C9Z4 860 aaKnown RBP5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 SEZ6L2Q6UXD5 910 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 DDX54Q8TDD1 881 aaKnown RBP5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 HHIPQ96QV1 700 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 MKNK1Q9BUB5 465 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 GGNBP2Q9H3C7 697 aa5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.25□□□□□ -1.57
RNU6-238P-201ENST00000363313 PDGFAP04085 211 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 NFICP08651 508 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 FUT4P22083 530 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 GSTM4Q03013 218 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 ZNF648Q5T619 568 aaPredicted RBP5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 ZNF765Q7L2R6 523 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 KSR1Q8IVT5 923 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 GLIS3Q8NEA6 775 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 HELQQ8TDG4 1101 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 EDEM1Q92611 657 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 SLC38A3Q99624 504 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 SEMA6CQ9H3T2 930 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 MKNK2Q9HBH9 465 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 VAV3Q9UKW4 847 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 ACTL7BQ9Y614 415 aa5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.24□□□□□ -1.57
RNU6-238P-201ENST00000363313 TRPA1O75762 1119 aa5.23□□□□□ -1.57
RNU6-238P-201ENST00000363313 SNX29Q8TEQ0 813 aa5.23□□□□□ -1.57
RNU6-238P-201ENST00000363313 STK32AQ8WU08 396 aa5.23□□□□□ -1.57
RNU6-238P-201ENST00000363313 LRRC4CQ9HCJ2 640 aa5.23□□□□□ -1.57
RNU6-238P-201ENST00000363313 C1GALT1Q9NS00 363 aa5.23□□□□□ -1.57
RNU6-238P-201ENST00000363313 FAM53CQ9NYF3 392 aa5.23□□□□□ -1.57
RNU6-238P-201ENST00000363313 PHACTR2O75167 634 aa5.22□□□□□ -1.57
RNU6-238P-201ENST00000363313 TNFRSF21O75509 655 aa5.22□□□□□ -1.57
RNU6-238P-201ENST00000363313 DNM1Q05193 864 aaKnown RBP5.22□□□□□ -1.57
RNU6-238P-201ENST00000363313 C8orf34Q49A92 452 aa5.22□□□□□ -1.57
RNU6-238P-201ENST00000363313 WFDC3Q8IUB2 231 aa5.22□□□□□ -1.57
RNU6-238P-201ENST00000363313 NETO1Q8TDF5 533 aa5.22□□□□□ -1.57
RNU6-238P-201ENST00000363313 FAM168AQ92567 244 aa5.22□□□□□ -1.57
RNU6-238P-201ENST00000363313 FAM84AQ96KN4 292 aa5.22□□□□□ -1.57
RNU6-238P-201ENST00000363313 CLEC4MQ9H2X3 399 aaPredicted RBP5.22□□□□□ -1.57
RNU6-238P-201ENST00000363313 EREGO14944 169 aa5.21□□□□□ -1.58
RNU6-238P-201ENST00000363313 PRKCQQ04759 706 aa5.21□□□□□ -1.58
RNU6-238P-201ENST00000363313 POU4F3Q15319 338 aa5.21□□□□□ -1.58
RNU6-238P-201ENST00000363313 SPRED2Q7Z698 418 aa5.21□□□□□ -1.58
RNU6-238P-201ENST00000363313 ATCAYQ86WG3 371 aa5.21□□□□□ -1.58
RNU6-238P-201ENST00000363313 ASAP3Q8TDY4 903 aa5.21□□□□□ -1.58
RNU6-238P-201ENST00000363313 AMOTL2Q9Y2J4 779 aa5.21□□□□□ -1.58
RNU6-238P-201ENST00000363313 NPR3P17342 541 aa5.2□□□□□ -1.58
RNU6-238P-201ENST00000363313 MAOBP27338 520 aa5.2□□□□□ -1.58
RNU6-238P-201ENST00000363313 ASPAP45381 313 aa5.2□□□□□ -1.58
RNU6-238P-201ENST00000363313 ZNF124Q15973 351 aa5.2□□□□□ -1.58
RNU6-238P-201ENST00000363313 TMEM164Q5U3C3 297 aa5.2□□□□□ -1.58
RNU6-238P-201ENST00000363313 PEAR1Q5VY43 1037 aaPredicted RBP5.2□□□□□ -1.58
RNU6-238P-201ENST00000363313 DYMQ7RTS9 669 aa5.2□□□□□ -1.58
RNU6-238P-201ENST00000363313 RAD18Q9NS91 495 aa5.2□□□□□ -1.58
RNU6-238P-201ENST00000363313 A0A096LPE4 126 aa5.19□□□□□ -1.58
RNU6-238P-201ENST00000363313 A0A1W2PPZ6 126 aa5.19□□□□□ -1.58
RNU6-238P-201ENST00000363313 RAB6AP20340 208 aa5.19□□□□□ -1.58
RNU6-238P-201ENST00000363313 ATP2B4P23634 1241 aa5.19□□□□□ -1.58
RNU6-238P-201ENST00000363313 EIF1AXP47813 144 aaKnown RBP5.19□□□□□ -1.58
RNU6-238P-201ENST00000363313 HNRNPUQ00839 825 aaKnown RBP eCLIP5.19□□□□□ -1.58
RNU6-238P-201ENST00000363313 PCDH1Q08174 1060 aa5.19□□□□□ -1.58
RNU6-238P-201ENST00000363313 SIAH1Q8IUQ4 282 aa5.19□□□□□ -1.58
RNU6-238P-201ENST00000363313 CCNJLQ8IV13 435 aa5.19□□□□□ -1.58
RNU6-238P-201ENST00000363313 RC3H2Q9HBD1 1191 aaKnown RBP5.19□□□□□ -1.58
RNU6-238P-201ENST00000363313 FAM105AQ9NUU6 356 aa5.19□□□□□ -1.58
RNU6-238P-201ENST00000363313 MESP2Q0VG99 397 aa5.18□□□□□ -1.58
RNU6-238P-201ENST00000363313 ZNF423Q2M1K9 1284 aa5.18□□□□□ -1.58
RNU6-238P-201ENST00000363313 FLAD1Q8NFF5 587 aa5.18□□□□□ -1.58
RNU6-238P-201ENST00000363313 PI4K2BQ8TCG2 481 aa5.18□□□□□ -1.58
RNU6-238P-201ENST00000363313 TOX2Q96NM4 488 aa5.18□□□□□ -1.58
RNU6-238P-201ENST00000363313 CORO1BQ9BR76 489 aa5.18□□□□□ -1.58
RNU6-238P-201ENST00000363313 ZFYVE28Q9HCC9 887 aa5.18□□□□□ -1.58
RNU6-238P-201ENST00000363313 MBNL3Q9NUK0 354 aaKnown RBP5.18□□□□□ -1.58
RNU6-238P-201ENST00000363313 SEPT3Q9UH03 358 aa5.18□□□□□ -1.58
RNU6-238P-201ENST00000363313 ZNF777Q9ULD5 760 aaPredicted RBP5.18□□□□□ -1.58
RNU6-238P-201ENST00000363313 TMEM265A0A087WTH1 108 aa5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 B3GALT4O96024 378 aa5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 RNASE1P07998 156 aaKnown RBP5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 CD8BP10966 210 aa5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 AP3B2Q13367 1082 aa5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 IFI16Q16666 785 aaKnown RBP5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 AKAP4Q5JQC9 854 aa5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 SLC23A3Q6PIS1 610 aa5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 ZNF574Q6ZN55 896 aaPredicted RBP5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 PPP1R16BQ96T49 567 aa5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 RAPGEFL1Q9UHV5 662 aa5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 SNX11Q9Y5W9 270 aa5.17□□□□□ -1.58
RNU6-238P-201ENST00000363313 AOC2O75106 756 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms