RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 RNF208Q9H0X6 261 aa4.53□□□□□ -1.68
RNU6-428P-201ENST00000362942 IGHA1P01876 353 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 NME2P22392 152 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 NLRP12P59046 1061 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 ADGRE1Q14246 886 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 FOXD4L6Q3SYB3 417 aaPredicted RBP4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 SCARA3Q6AZY7 606 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 ADAMTSL4Q6UY14 1074 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 FOXD4L3Q6VB84 417 aaPredicted RBP4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 TPTE2Q6XPS3 522 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 ACAD11Q709F0 780 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 GALNT11Q8NCW6 608 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 C3orf58Q8NDZ4 430 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 RUSC1Q9BVN2 902 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 AKTIPQ9H8T0 292 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 CYP4F12Q9HCS2 524 aa4.52□□□□□ -1.69
RNU6-428P-201ENST00000362942 KRBA1A5PL33 1030 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 MEGF11A6BM72 1044 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 SART1O43290 800 aaKnown RBP4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 SELPP16109 830 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 GATA4P43694 442 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 PWP1Q13610 501 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 CCDC85BQ15834 202 aaPredicted RBP4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 EXOSC6Q5RKV6 272 aaKnown RBP4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 NUTM2GQ5VZR2 741 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 ANKRD34AQ69YU3 496 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 FDX2Q6P4F2 183 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 SHISA2Q6UWI4 295 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 TXNRD3Q86VQ6 643 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 SULF2Q8IWU5 870 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 NECAB3Q96P71 396 aaPredicted RBP4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 NOC4LQ9BVI4 516 aaKnown RBP4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 RAD18Q9NS91 495 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 USP31Q70CQ4 1352 aa4.51□□□□□ -1.69
RNU6-428P-201ENST00000362942 C1QTNF9BB2RNN3 333 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 F8W735 103 aaPredicted RBP4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 VAMP1P23763 118 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 ARNTP27540 789 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 ZNF157P51786 506 aaPredicted RBP4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 TAGLNQ01995 201 aaKnown RBP4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 FAAP100Q0VG06 881 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 PDE3AQ14432 1141 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 MBTPS1Q14703 1052 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 UVSSAQ2YD98 709 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 PLA2G4EQ3MJ16 856 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 WFDC12Q8WWY7 111 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 FOXD4L4Q8WXT5 416 aaPredicted RBP4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 FAM161BQ96MY7 647 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 CBX8Q9HC52 389 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 KRT82Q9NSB4 513 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 CYP8B1Q9UNU6 501 aa4.5□□□□□ -1.69
RNU6-428P-201ENST00000362942 SYNGAP1Q96PV0 1343 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 LOC100289279A0A1B0GTE1 492 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 MSTNO14793 375 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 DDX3YO15523 660 aaKnown RBP4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 ADAM11O75078 769 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 GSTP1P09211 210 aaKnown RBP4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 SLFN14P0C7P3 912 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 GLB1P16278 677 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 MAOBP27338 520 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 CHRNA4P43681 627 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 RPS26P62854 115 aaKnown RBP4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 MRPL58Q14197 206 aaKnown RBP4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 CD163Q86VB7 1156 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 TMEM87AQ8NBN3 555 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 UBASH3BQ8TF42 649 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 MRRFQ96E11 262 aaKnown RBP4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 YIPF2Q9BWQ6 316 aa4.49□□□□□ -1.69
RNU6-428P-201ENST00000362942 ENC1O14682 589 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 TM4SF5O14894 197 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 GAS2O43903 313 aaKnown RBP4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 FBXO24O75426 580 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 TRIM37O94972 964 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 IREB2P48200 963 aaKnown RBP4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 GSK3AP49840 483 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 PCNX4Q63HM2 1172 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 HGSNATQ68CP4 663 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 TTBK2Q6IQ55 1244 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 LLGL2Q6P1M3 1020 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 HS2ST1Q7LGA3 356 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 RELL1Q8IUW5 271 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 SMG8Q8ND04 991 aaKnown RBP4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 KCNB2Q92953 911 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 ACSBG1Q96GR2 724 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 TRIM56Q9BRZ2 755 aaKnown RBP4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 TMPRSS13Q9BYE2 586 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 SUGCTQ9HAC7 445 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 METTL5Q9NRN9 209 aaKnown RBP4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 RNF19AQ9NV58 838 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 KCNK4Q9NYG8 393 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 HIF3AQ9Y2N7 669 aa4.48□□□□□ -1.69
RNU6-428P-201ENST00000362942 WISP1O95388 367 aa4.47□□□□□ -1.69
RNU6-428P-201ENST00000362942 CTSHP09668 335 aa4.47□□□□□ -1.69
RNU6-428P-201ENST00000362942 NOS3P29474 1203 aa4.47□□□□□ -1.69
RNU6-428P-201ENST00000362942 TSNAXIP1Q2TAA8 658 aa4.47□□□□□ -1.69
RNU6-428P-201ENST00000362942 MEI1Q5TIA1 1274 aa4.47□□□□□ -1.69
RNU6-428P-201ENST00000362942 Q6ZS46 218 aa4.47□□□□□ -1.69
RNU6-428P-201ENST00000362942 KIAA1211Q6ZU35 1233 aa4.47□□□□□ -1.69
RNU6-428P-201ENST00000362942 C12orf50Q8NA57 414 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms