RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 PCCAP05165 728 aaPredicted RBP22.11■■□□□ 1.13
CMTM3-201ENST00000361909 TMCO3Q6UWJ1 677 aa22.11■■□□□ 1.13
CMTM3-201ENST00000361909 COPRSQ9NQ92 184 aa22.11■■□□□ 1.13
CMTM3-201ENST00000361909 TRMT1Q9NXH9 659 aaKnown RBP22.11■■□□□ 1.13
CMTM3-201ENST00000361909 FOXO4P98177 505 aa22.1■■□□□ 1.13
CMTM3-201ENST00000361909 FAM160A1Q05DH4 1040 aa22.1■■□□□ 1.13
CMTM3-201ENST00000361909 NMIQ13287 307 aaPredicted RBP22.1■■□□□ 1.13
CMTM3-201ENST00000361909 HLFQ16534 295 aa22.1■■□□□ 1.13
CMTM3-201ENST00000361909 ZNF772Q68DY9 489 aaPredicted RBP22.1■■□□□ 1.13
CMTM3-201ENST00000361909 ZBTB38Q8NAP3 1195 aaPredicted RBP22.09■■□□□ 1.13
CMTM3-201ENST00000361909 BRF1Q92994 677 aa22.09■■□□□ 1.13
CMTM3-201ENST00000361909 CNTNAP4Q9C0A0 1308 aa22.09■■□□□ 1.13
CMTM3-201ENST00000361909 ZBTB22O15209 634 aa22.09■■□□□ 1.13
CMTM3-201ENST00000361909 G3BP1Q13283 466 aaKnown RBP eCLIP22.09■■□□□ 1.13
CMTM3-201ENST00000361909 ERCC6LQ2NKX8 1250 aa22.09■■□□□ 1.13
CMTM3-201ENST00000361909 CCAR1Q8IX12 1150 aaKnown RBP22.09■■□□□ 1.13
CMTM3-201ENST00000361909 ZNF396Q96N95 335 aaPredicted RBP22.09■■□□□ 1.13
CMTM3-201ENST00000361909 RFX7Q2KHR2 1363 aa22.09■■□□□ 1.13
CMTM3-201ENST00000361909 RFX5P48382 616 aaPredicted RBP22.08■■□□□ 1.13
CMTM3-201ENST00000361909 GPS2Q13227 327 aa22.08■■□□□ 1.13
CMTM3-201ENST00000361909 RC3H1Q5TC82 1133 aaKnown RBP22.08■■□□□ 1.13
CMTM3-201ENST00000361909 E4F1Q66K89 784 aaPredicted RBP22.08■■□□□ 1.13
CMTM3-201ENST00000361909 PTF1AQ7RTS3 328 aa22.08■■□□□ 1.13
CMTM3-201ENST00000361909 PLA2G12BQ9BX93 195 aa22.08■■□□□ 1.13
CMTM3-201ENST00000361909 TBC1D2BQ9UPU7 963 aa22.08■■□□□ 1.13
CMTM3-201ENST00000361909 NLRP10Q86W26 655 aa22.08■■□□□ 1.12
CMTM3-201ENST00000361909 PA2G4Q9UQ80 394 aaKnown RBP22.08■■□□□ 1.12
CMTM3-201ENST00000361909 CDHR2Q9BYE9 1310 aa22.07■■□□□ 1.12
CMTM3-201ENST00000361909 LY75O60449 1722 aa22.07■■□□□ 1.12
CMTM3-201ENST00000361909 RGL2O15211 777 aa22.07■■□□□ 1.12
CMTM3-201ENST00000361909 CAPN2P17655 700 aa22.07■■□□□ 1.12
CMTM3-201ENST00000361909 SFPQP23246 707 aaKnown RBP eCLIP22.07■■□□□ 1.12
CMTM3-201ENST00000361909 ARHGAP29Q52LW3 1261 aa22.07■■□□□ 1.12
CMTM3-201ENST00000361909 FAM182BQ5T319 152 aa22.07■■□□□ 1.12
CMTM3-201ENST00000361909 USPL1Q5W0Q7 1092 aa22.07■■□□□ 1.12
CMTM3-201ENST00000361909 BCL11BQ9C0K0 894 aaPredicted RBP22.07■■□□□ 1.12
CMTM3-201ENST00000361909 PLA2G4AP47712 749 aa22.06■■□□□ 1.12
CMTM3-201ENST00000361909 HNRNPH2P55795 449 aaKnown RBP22.06■■□□□ 1.12
CMTM3-201ENST00000361909 LMBR1LQ6UX01 489 aa22.06■■□□□ 1.12
CMTM3-201ENST00000361909 ZNF34Q8IZ26 560 aa22.06■■□□□ 1.12
CMTM3-201ENST00000361909 LINC00116Q8NCU8 138 aa22.06■■□□□ 1.12
CMTM3-201ENST00000361909 ENGASEQ8NFI3 743 aa22.06■■□□□ 1.12
CMTM3-201ENST00000361909 SMARCC2Q8TAQ2 1214 aa22.06■■□□□ 1.12
CMTM3-201ENST00000361909 FAM196AQ6ZSG2 479 aa22.06■■□□□ 1.12
CMTM3-201ENST00000361909 NBPF11Q86T75 865 aa22.06■■□□□ 1.12
CMTM3-201ENST00000361909 UBXN4Q92575 508 aa22.06■■□□□ 1.12
CMTM3-201ENST00000361909 CHMP4CQ96CF2 233 aa22.06■■□□□ 1.12
CMTM3-201ENST00000361909 ST7Q9NRC1 585 aa22.06■■□□□ 1.12
CMTM3-201ENST00000361909 ORC3Q9UBD5 711 aaPredicted RBP22.06■■□□□ 1.12
CMTM3-201ENST00000361909 ETF1P62495 437 aaKnown RBP22.05■■□□□ 1.12
CMTM3-201ENST00000361909 PTPN12Q05209 780 aaKnown RBP22.05■■□□□ 1.12
CMTM3-201ENST00000361909 AOPEPQ8N6M6 819 aa22.05■■□□□ 1.12
CMTM3-201ENST00000361909 FAM227BQ96M60 508 aa22.05■■□□□ 1.12
CMTM3-201ENST00000361909 CCDC158Q5M9N0 1113 aa22.05■■□□□ 1.12
CMTM3-201ENST00000361909 SYT10Q6XYQ8 523 aa22.05■■□□□ 1.12
CMTM3-201ENST00000361909 UBXN6Q9BZV1 441 aa22.05■■□□□ 1.12
CMTM3-201ENST00000361909 EFCAB8A8MWE9 144 aa22.04■■□□□ 1.12
CMTM3-201ENST00000361909 CAMTA2O94983 1202 aa22.04■■□□□ 1.12
CMTM3-201ENST00000361909 ADD1P35611 737 aaKnown RBP22.04■■□□□ 1.12
CMTM3-201ENST00000361909 KRT27Q7Z3Y8 459 aa22.04■■□□□ 1.12
CMTM3-201ENST00000361909 SASH1O94885 1247 aa22.04■■□□□ 1.12
CMTM3-201ENST00000361909 AACSQ86V21 672 aa22.04■■□□□ 1.12
CMTM3-201ENST00000361909 FCHSD1Q86WN1 690 aa22.04■■□□□ 1.12
CMTM3-201ENST00000361909 DNAI1Q9UI46 699 aa22.04■■□□□ 1.12
CMTM3-201ENST00000361909 CLEC4GQ6UXB4 293 aa22.03■■□□□ 1.12
CMTM3-201ENST00000361909 BRWD3Q6RI45 1802 aa22.03■■□□□ 1.12
CMTM3-201ENST00000361909 DTNBO60941 627 aa22.02■■□□□ 1.12
CMTM3-201ENST00000361909 RAD51AP2Q09MP3 1159 aa22.02■■□□□ 1.12
CMTM3-201ENST00000361909 GOLPH3LQ9H4A5 285 aa22.02■■□□□ 1.12
CMTM3-201ENST00000361909 CCNL1Q9UK58 526 aaPredicted RBP22.02■■□□□ 1.12
CMTM3-201ENST00000361909 JAK2O60674 1132 aa22.02■■□□□ 1.12
CMTM3-201ENST00000361909 ZRSR1Q15695 479 aaKnown RBP22.02■■□□□ 1.12
CMTM3-201ENST00000361909 MNS1Q8NEH6 495 aa22.02■■□□□ 1.12
CMTM3-201ENST00000361909 FAM89AQ96GI7 184 aa22.02■■□□□ 1.12
CMTM3-201ENST00000361909 FSD1Q9BTV5 496 aa22.02■■□□□ 1.12
CMTM3-201ENST00000361909 CWC15Q9P013 229 aaKnown RBP22.02■■□□□ 1.12
CMTM3-201ENST00000361909 FEZ2Q9UHY8 353 aaPredicted RBP22.02■■□□□ 1.12
CMTM3-201ENST00000361909 A0A0D9SFI3 127 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 A0A1W2PQ27 194 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 A0A1W2PQ64 194 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 A0A1W2PQD8 194 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 CSF1RP07333 972 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 GPTP24298 496 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 STK3Q13188 491 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 LRRFIP1Q32MZ4 808 aaKnown RBP22.01■■□□□ 1.11
CMTM3-201ENST00000361909 PARP10Q53GL7 1025 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 NEK1Q96PY6 1258 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 ZNF652Q9Y2D9 606 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 BCORQ6W2J9 1755 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 TADA3O75528 432 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 ARMCX5Q6P1M9 558 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 AK7Q96M32 723 aa22.01■■□□□ 1.11
CMTM3-201ENST00000361909 TAF1LQ8IZX4 1826 aa22■■□□□ 1.11
CMTM3-201ENST00000361909 PFKFB2O60825 505 aa22■■□□□ 1.11
CMTM3-201ENST00000361909 RPS6KA4O75676 772 aa22■■□□□ 1.11
CMTM3-201ENST00000361909 HMGB1P09429 215 aaKnown RBP22■■□□□ 1.11
CMTM3-201ENST00000361909 FSIP1Q8NA03 581 aa22■■□□□ 1.11
CMTM3-201ENST00000361909 KLHDC4Q8TBB5 520 aa22■■□□□ 1.11
CMTM3-201ENST00000361909 MRPS27Q92552 414 aaKnown RBP22■■□□□ 1.11
CMTM3-201ENST00000361909 PSD3Q9NYI0 1048 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms