RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CAVIN2O95810 425 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 EZRP15311 586 aaKnown RBP21.11■□□□□ 0.97
CLIP2-202ENST00000361545 ZAP70P43403 619 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 NEMFO60524 1076 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 TMCO3Q6UWJ1 677 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 TBC1D5Q92609 795 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 PODXL2Q9NZ53 605 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 METP08581 1390 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 GIGYF1O75420 1035 aaPredicted RBP21.11■□□□□ 0.97
CLIP2-202ENST00000361545 HOOK3Q86VS8 718 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 TMOD4Q9NZQ9 345 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.11■□□□□ 0.97
CLIP2-202ENST00000361545 NEURL1BA8MQ27 555 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 RPS8P62241 208 aaKnown RBP21.11■□□□□ 0.97
CLIP2-202ENST00000361545 MAPKAPK5Q8IW41 473 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 DNAJC25Q9H1X3 360 aa21.11■□□□□ 0.97
CLIP2-202ENST00000361545 TTLL7Q6ZT98 887 aa21.1■□□□□ 0.97
CLIP2-202ENST00000361545 GBP3Q9H0R5 595 aa21.1■□□□□ 0.97
CLIP2-202ENST00000361545 ARHGEF10LQ9HCE6 1279 aa21.1■□□□□ 0.97
CLIP2-202ENST00000361545 ZNF174Q15697 407 aa21.1■□□□□ 0.97
CLIP2-202ENST00000361545 SNX21Q969T3 373 aa21.1■□□□□ 0.97
CLIP2-202ENST00000361545 MROH5Q6ZUA9 1318 aa21.1■□□□□ 0.97
CLIP2-202ENST00000361545 CCDC66A2RUB6 948 aa21.1■□□□□ 0.97
CLIP2-202ENST00000361545 KIAA0754O94854 1291 aa21.1■□□□□ 0.97
CLIP2-202ENST00000361545 AOPEPQ8N6M6 819 aa21.1■□□□□ 0.97
CLIP2-202ENST00000361545 PPIP5K2O43314 1243 aa21.1■□□□□ 0.97
CLIP2-202ENST00000361545 JADE2Q9NQC1 790 aa21.09■□□□□ 0.97
CLIP2-202ENST00000361545 SLC27A2O14975 620 aa21.09■□□□□ 0.97
CLIP2-202ENST00000361545 RRP9O43818 475 aaKnown RBP21.09■□□□□ 0.97
CLIP2-202ENST00000361545 ALDH1B1P30837 517 aa21.09■□□□□ 0.97
CLIP2-202ENST00000361545 CTDSPL2Q05D32 466 aa21.09■□□□□ 0.97
CLIP2-202ENST00000361545 IFFO1Q0D2I5 559 aa21.09■□□□□ 0.97
CLIP2-202ENST00000361545 NIM1KQ8IY84 436 aa21.09■□□□□ 0.97
CLIP2-202ENST00000361545 QTRT2Q9H974 415 aaKnown RBP21.09■□□□□ 0.97
CLIP2-202ENST00000361545 BCS1LQ9Y276 419 aa21.09■□□□□ 0.97
CLIP2-202ENST00000361545 MRVI1Q9Y6F6 885 aa21.09■□□□□ 0.97
CLIP2-202ENST00000361545 STX17P56962 302 aa21.09■□□□□ 0.97
CLIP2-202ENST00000361545 HLTFQ14527 1009 aaKnown RBP eCLIP21.09■□□□□ 0.97
CLIP2-202ENST00000361545 SUPT20HQ8NEM7 779 aa21.09■□□□□ 0.97
CLIP2-202ENST00000361545 CCDC172P0C7W6 258 aa21.08■□□□□ 0.97
CLIP2-202ENST00000361545 DPH6Q7L8W6 267 aa21.08■□□□□ 0.97
CLIP2-202ENST00000361545 DYDC1Q8WWB3 177 aa21.08■□□□□ 0.97
CLIP2-202ENST00000361545 KBTBD3Q8NAB2 608 aa21.08■□□□□ 0.97
CLIP2-202ENST00000361545 VWA3AA6NCI4 1184 aa21.08■□□□□ 0.96
CLIP2-202ENST00000361545 SEC24BO95487 1268 aa21.08■□□□□ 0.96
CLIP2-202ENST00000361545 RPS6KB1P23443 525 aa21.08■□□□□ 0.96
CLIP2-202ENST00000361545 NCBP1Q09161 790 aaKnown RBP21.08■□□□□ 0.96
CLIP2-202ENST00000361545 ZNF532Q9HCE3 1301 aa21.08■□□□□ 0.96
CLIP2-202ENST00000361545 ARID5AQ03989 594 aa21.08■□□□□ 0.96
CLIP2-202ENST00000361545 LRSAM1Q6UWE0 723 aa21.08■□□□□ 0.96
CLIP2-202ENST00000361545 TGFBRAP1Q8WUH2 860 aa21.08■□□□□ 0.96
CLIP2-202ENST00000361545 V9GY48 417 aaPredicted RBP21.08■□□□□ 0.96
CLIP2-202ENST00000361545 GTF2IP78347 998 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 CTAGE1Q96RT6 745 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 IMPG2Q9BZV3 1241 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 NCOA5Q9HCD5 579 aaKnown RBP21.07■□□□□ 0.96
CLIP2-202ENST00000361545 BRAPQ7Z569 592 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 RGS22Q8NE09 1264 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 KIAA0232Q92628 1395 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 CTSWP56202 376 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 SPAG1Q07617 926 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 FAM182BQ5T319 152 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 CHMP2AO43633 222 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 TMEM87BQ96K49 555 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 HS2ST1Q7LGA3 356 aa21.07■□□□□ 0.96
CLIP2-202ENST00000361545 PTGS1P23219 599 aa21.06■□□□□ 0.96
CLIP2-202ENST00000361545 MAP3K9P80192 1104 aa21.06■□□□□ 0.96
CLIP2-202ENST00000361545 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.06■□□□□ 0.96
CLIP2-202ENST00000361545 DHX37Q8IY37 1157 aaKnown RBP21.06■□□□□ 0.96
CLIP2-202ENST00000361545 MYL10Q9BUA6 226 aa21.06■□□□□ 0.96
CLIP2-202ENST00000361545 GNG11P61952 73 aa21.06■□□□□ 0.96
CLIP2-202ENST00000361545 SNW1Q13573 536 aaKnown RBP21.05■□□□□ 0.96
CLIP2-202ENST00000361545 DLGAP5Q15398 846 aa21.05■□□□□ 0.96
CLIP2-202ENST00000361545 CPXCR1Q8N123 301 aa21.05■□□□□ 0.96
CLIP2-202ENST00000361545 ZSWIM4Q9H7M6 989 aa21.05■□□□□ 0.96
CLIP2-202ENST00000361545 MAP9Q49MG5 647 aa21.05■□□□□ 0.96
CLIP2-202ENST00000361545 ANGEL1Q9UNK9 670 aaKnown RBP21.05■□□□□ 0.96
CLIP2-202ENST00000361545 PDE6BP35913 854 aa21.05■□□□□ 0.96
CLIP2-202ENST00000361545 PDCL2Q8N4E4 241 aa21.05■□□□□ 0.96
CLIP2-202ENST00000361545 SAMD9Q5K651 1589 aa21.05■□□□□ 0.96
CLIP2-202ENST00000361545 SLC1A4P43007 532 aa21.05■□□□□ 0.96
CLIP2-202ENST00000361545 NPHP4O75161 1426 aaPredicted RBP21.05■□□□□ 0.96
CLIP2-202ENST00000361545 UVSSAQ2YD98 709 aa21.04■□□□□ 0.96
CLIP2-202ENST00000361545 PIK3AP1Q6ZUJ8 805 aa21.04■□□□□ 0.96
CLIP2-202ENST00000361545 BCCIPQ9P287 314 aaKnown RBP eCLIP21.04■□□□□ 0.96
CLIP2-202ENST00000361545 MAGI3Q5TCQ9 1506 aa21.04■□□□□ 0.96
CLIP2-202ENST00000361545 FAM200AQ8TCP9 573 aa21.04■□□□□ 0.96
CLIP2-202ENST00000361545 MFSD14BQ5SR56 506 aa21.04■□□□□ 0.96
CLIP2-202ENST00000361545 EDC3Q96F86 508 aaKnown RBP21.04■□□□□ 0.96
CLIP2-202ENST00000361545 LOC102724428A0A0B4J2F2 783 aa21.04■□□□□ 0.96
CLIP2-202ENST00000361545 SYT1P21579 422 aa21.04■□□□□ 0.96
CLIP2-202ENST00000361545 SIK1P57059 783 aa21.04■□□□□ 0.96
CLIP2-202ENST00000361545 EAPPQ56P03 285 aaPredicted RBP21.03■□□□□ 0.96
CLIP2-202ENST00000361545 SPECC1Q5M775 1068 aa21.03■□□□□ 0.96
CLIP2-202ENST00000361545 IQUBQ8NA54 791 aa21.03■□□□□ 0.96
CLIP2-202ENST00000361545 TRPC5Q9UL62 973 aaPredicted RBP21.03■□□□□ 0.96
CLIP2-202ENST00000361545 DEXIO95424 95 aa21.03■□□□□ 0.96
CLIP2-202ENST00000361545 USPL1Q5W0Q7 1092 aa21.03■□□□□ 0.96
CLIP2-202ENST00000361545 NAA15Q9BXJ9 866 aaKnown RBP21.03■□□□□ 0.96
CLIP2-202ENST00000361545 ASAP1Q9ULH1 1129 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms