RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 CYP46A1Q9Y6A2 500 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 MAP3K5Q99683 1374 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 CTAGE15A4D2H0 777 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 APBB1O00213 710 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 CTAGE8P0CG41 777 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 SKOR1P84550 965 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 ST3GAL1Q11201 340 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 CTAGE6Q86UF2 777 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 CTAGE4Q8IX94 777 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
CNOT4-203ENST00000361528 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
CNOT4-203ENST00000361528 COG1Q8WTW3 980 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 SH3GL2Q99962 352 aa13.19□□□□□ -0.3
CNOT4-203ENST00000361528 LSG1Q9H089 658 aaKnown RBP13.19□□□□□ -0.3
CNOT4-203ENST00000361528 TRPM2O94759 1503 aa13.18□□□□□ -0.3
CNOT4-203ENST00000361528 CDC42BPGQ6DT37 1551 aa13.18□□□□□ -0.3
CNOT4-203ENST00000361528 SETD1AO15047 1707 aaKnown RBP13.18□□□□□ -0.3
CNOT4-203ENST00000361528 GOLGA8KD6RF30 607 aa13.18□□□□□ -0.3
CNOT4-203ENST00000361528 FANCCQ00597 558 aa13.18□□□□□ -0.3
CNOT4-203ENST00000361528 ATP2B2Q01814 1243 aa13.18□□□□□ -0.3
CNOT4-203ENST00000361528 SKIDA1Q1XH10 827 aa13.18□□□□□ -0.3
CNOT4-203ENST00000361528 TWISTNBQ3B726 338 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-203ENST00000361528 C3orf20Q8ND61 904 aa13.18□□□□□ -0.3
CNOT4-203ENST00000361528 ZBTB10Q96DT7 871 aa13.18□□□□□ -0.3
CNOT4-203ENST00000361528 PUS7Q96PZ0 661 aaKnown RBP13.18□□□□□ -0.3
CNOT4-203ENST00000361528 ZC3H4Q9UPT8 1303 aaKnown RBP13.18□□□□□ -0.3
CNOT4-203ENST00000361528 ERICH2A1L162 156 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 NDUFAB1O14561 156 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 ATP5JP18859 108 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 GNGT1P63211 74 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 HSP90AB2PQ58FF8 381 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 CAPRIN2Q6IMN6 1127 aaKnown RBP13.17□□□□□ -0.3
CNOT4-203ENST00000361528 FAM173BQ6P4H8 233 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 VSTM4Q8IW00 320 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 CCDC13Q8IYE1 715 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 ENGASEQ8NFI3 743 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 MMTAG2Q9BU76 263 aaKnown RBP13.17□□□□□ -0.3
CNOT4-203ENST00000361528 PLCH2O75038 1416 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 ABCC3O15438 1527 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 ABCD1P33897 745 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 ANKRD1Q15327 319 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 ME3Q16798 604 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 NCAPG2Q86XI2 1143 aa13.17□□□□□ -0.3
CNOT4-203ENST00000361528 CCDC47Q96A33 483 aaKnown RBP13.17□□□□□ -0.3
CNOT4-203ENST00000361528 PUF60Q9UHX1 559 aaKnown RBP13.17□□□□□ -0.3
CNOT4-203ENST00000361528 SRRM3A6NNA2 597 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-203ENST00000361528 FCHSD2O94868 740 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 TOP1P11387 765 aaKnown RBP13.16□□□□□ -0.3
CNOT4-203ENST00000361528 CYB5D1Q6P9G0 228 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 SDCCAG8Q86SQ7 713 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-203ENST00000361528 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 CCDC148Q8NFR7 591 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 PRDM16Q9HAZ2 1276 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 RCOR1Q9UKL0 485 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 CORO1CQ9ULV4 474 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-203ENST00000361528 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-203ENST00000361528 TARSL2A2RTX5 802 aaKnown RBP13.16□□□□□ -0.3
CNOT4-203ENST00000361528 KIF5CO60282 957 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 PFKFB2O60825 505 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 CD151P48509 253 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 RESTQ13127 1097 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 KCNB1Q14721 858 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 TSPYL6Q8N831 410 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 SMARCC2Q8TAQ2 1214 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 ALDH8A1Q9H2A2 487 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-203ENST00000361528 ZSWIM4Q9H7M6 989 aa13.16□□□□□ -0.3
CNOT4-203ENST00000361528 RHOXF2BP0C7M4 288 aa13.15□□□□□ -0.3
CNOT4-203ENST00000361528 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.3
CNOT4-203ENST00000361528 RHOXF2Q9BQY4 288 aa13.15□□□□□ -0.3
CNOT4-203ENST00000361528 FRMD3A2A2Y4 597 aa13.15□□□□□ -0.31
CNOT4-203ENST00000361528 CCDC175P0C221 793 aa13.15□□□□□ -0.31
CNOT4-203ENST00000361528 FAM163BP0C2L3 166 aa13.15□□□□□ -0.31
CNOT4-203ENST00000361528 GGCXP38435 758 aa13.15□□□□□ -0.31
CNOT4-203ENST00000361528 NAP1L1P55209 391 aaKnown RBP13.15□□□□□ -0.31
CNOT4-203ENST00000361528 NCAPHQ15003 741 aa13.15□□□□□ -0.31
CNOT4-203ENST00000361528 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.31
CNOT4-203ENST00000361528 MIS18BP1Q6P0N0 1132 aa13.15□□□□□ -0.31
CNOT4-203ENST00000361528 SLC30A9Q6PML9 568 aa13.15□□□□□ -0.31
CNOT4-203ENST00000361528 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.31
CNOT4-203ENST00000361528 CENPHQ9H3R5 247 aa13.15□□□□□ -0.31
CNOT4-203ENST00000361528 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.15□□□□□ -0.319e-8■■■■■ 77
CNOT4-203ENST00000361528 PCDHGA4Q9Y5G9 962 aa13.15□□□□□ -0.31
CNOT4-203ENST00000361528 CHD1O14646 1710 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 SAMD9LQ8IVG5 1584 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 CPSF1Q10570 1443 aaKnown RBP13.14□□□□□ -0.31
CNOT4-203ENST00000361528 CTAGE9A4FU28 777 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 ZNF202O95125 648 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 EPB41P11171 864 aaKnown RBP13.14□□□□□ -0.31
CNOT4-203ENST00000361528 PEX19P40855 299 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 UBASH3AP57075 661 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 NLRP12P59046 1061 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 CWF19L1Q69YN2 538 aaKnown RBP13.14□□□□□ -0.31
CNOT4-203ENST00000361528 SPATA21Q7Z572 469 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 ARHGEF25Q86VW2 580 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 APLFQ8IW19 511 aaPredicted RBP13.14□□□□□ -0.31
CNOT4-203ENST00000361528 CCDC170Q8IYT3 715 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 FUKQ8N0W3 1084 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 LARP6Q9BRS8 491 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms