RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PDE1AP54750 535 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 ETFBKMTQ8IXQ9 262 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 IP6K1Q92551 441 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 UBXN4Q92575 508 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 VTI1AQ96AJ9 217 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 QTRT2Q9H974 415 aaKnown RBP8.91□□□□□ -0.98
CLCN3-202ENST00000360642 POLIQ9UNA4 740 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 MED1Q15648 1581 aaPredicted RBP8.91□□□□□ -0.98
CLCN3-202ENST00000360642 TUBGCP6Q96RT7 1819 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 NDUFB5O43674 189 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 ATP8B2P98198 1209 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 CLEC17AQ6ZS10 378 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 SLC6A16Q9GZN6 736 aa8.91□□□□□ -0.98
CLCN3-202ENST00000360642 PHRF1Q9P1Y6 1649 aaKnown RBP8.91□□□□□ -0.98
CLCN3-202ENST00000360642 GNAI3P08754 354 aa8.9□□□□□ -0.98
CLCN3-202ENST00000360642 IRS1P35568 1242 aa8.9□□□□□ -0.98
CLCN3-202ENST00000360642 PSMD2Q13200 908 aa8.9□□□□□ -0.98
CLCN3-202ENST00000360642 PRKD2Q9BZL6 878 aa8.9□□□□□ -0.98
CLCN3-202ENST00000360642 MEI1Q5TIA1 1274 aa8.9□□□□□ -0.98
CLCN3-202ENST00000360642 PRR14Q9BWN1 585 aa8.9□□□□□ -0.98
CLCN3-202ENST00000360642 PIF1Q9H611 641 aa8.9□□□□□ -0.98
CLCN3-202ENST00000360642 HCN4Q9Y3Q4 1203 aa8.9□□□□□ -0.98
CLCN3-202ENST00000360642 PNMA6EA0A0J9YXQ4 647 aa8.9□□□□□ -0.99
CLCN3-202ENST00000360642 EPHA4P54764 986 aa8.9□□□□□ -0.99
CLCN3-202ENST00000360642 CASC1Q6TDU7 716 aa8.9□□□□□ -0.99
CLCN3-202ENST00000360642 SLC9A9Q8IVB4 645 aa8.9□□□□□ -0.99
CLCN3-202ENST00000360642 LTV1Q96GA3 475 aaPredicted RBP8.9□□□□□ -0.99
CLCN3-202ENST00000360642 TINF2Q9BSI4 451 aa8.9□□□□□ -0.99
CLCN3-202ENST00000360642 IBTKQ9P2D0 1353 aaPredicted RBP8.89□□□□□ -0.99
CLCN3-202ENST00000360642 ZNF142P52746 1687 aaPredicted RBP8.89□□□□□ -0.99
CLCN3-202ENST00000360642 ESPNB1AK53 854 aa8.89□□□□□ -0.99
CLCN3-202ENST00000360642 ADH1BP00325 375 aa8.89□□□□□ -0.99
CLCN3-202ENST00000360642 RACK1P63244 317 aaKnown RBP8.89□□□□□ -0.99
CLCN3-202ENST00000360642 SKOR1P84550 965 aa8.89□□□□□ -0.99
CLCN3-202ENST00000360642 ANKLE2Q86XL3 938 aa8.89□□□□□ -0.99
CLCN3-202ENST00000360642 USP44Q9H0E7 712 aa8.89□□□□□ -0.99
CLCN3-202ENST00000360642 CTSHP09668 335 aa8.89□□□□□ -0.99
CLCN3-202ENST00000360642 XRCC6P12956 609 aaKnown RBP eCLIP8.89□□□□□ -0.992e-6■■■■■ 34.5
CLCN3-202ENST00000360642 FMR1Q06787 632 aaKnown RBP eCLIP8.89□□□□□ -0.997e-6■■□□□ 12.8
CLCN3-202ENST00000360642 NBPF6Q5VWK0 638 aa8.89□□□□□ -0.99
CLCN3-202ENST00000360642 USHBP1Q8N6Y0 703 aa8.89□□□□□ -0.99
CLCN3-202ENST00000360642 GPKOWQ92917 476 aaPredicted RBP eCLIP8.89□□□□□ -0.99
CLCN3-202ENST00000360642 NBPF4Q96M43 638 aa8.89□□□□□ -0.99
CLCN3-202ENST00000360642 GBP4Q96PP9 640 aa8.89□□□□□ -0.99
CLCN3-202ENST00000360642 EXOC6BQ9Y2D4 811 aa8.89□□□□□ -0.99
CLCN3-202ENST00000360642 GOLGA6L3A6NEY3 463 aa8.88□□□□□ -0.99
CLCN3-202ENST00000360642 POTEMA6NI47 508 aa8.88□□□□□ -0.99
CLCN3-202ENST00000360642 ERC2O15083 957 aa8.88□□□□□ -0.99
CLCN3-202ENST00000360642 REC8O95072 547 aa8.88□□□□□ -0.99
CLCN3-202ENST00000360642 C8orf37Q96NL8 207 aa8.88□□□□□ -0.99
CLCN3-202ENST00000360642 LRRCC1Q9C099 1032 aa8.88□□□□□ -0.99
CLCN3-202ENST00000360642 ADGRL3Q9HAR2 1447 aa8.88□□□□□ -0.99
CLCN3-202ENST00000360642 KDM3BQ7LBC6 1761 aa8.88□□□□□ -0.99
CLCN3-202ENST00000360642 LZTS3O60299 673 aaPredicted RBP8.88□□□□□ -0.99
CLCN3-202ENST00000360642 MYCP01106 439 aaPredicted RBP8.88□□□□□ -0.99
CLCN3-202ENST00000360642 HSP90AA1P07900 732 aaKnown RBP8.88□□□□□ -0.99
CLCN3-202ENST00000360642 STAP2Q9UGK3 403 aa8.88□□□□□ -0.99
CLCN3-202ENST00000360642 HOXB7P09629 217 aa8.88□□□□□ -0.99
CLCN3-202ENST00000360642 ADD1P35611 737 aaKnown RBP8.88□□□□□ -0.99
CLCN3-202ENST00000360642 RBCK1Q9BYM8 510 aa8.88□□□□□ -0.99
CLCN3-202ENST00000360642 CWC22Q9HCG8 908 aaKnown RBP8.88□□□□□ -0.99
CLCN3-202ENST00000360642 PTMSP20962 102 aa8.87□□□□□ -0.99
CLCN3-202ENST00000360642 EIF4A1P60842 406 aaKnown RBP8.87□□□□□ -0.99
CLCN3-202ENST00000360642 NCAPD2Q15021 1401 aa8.87□□□□□ -0.99
CLCN3-202ENST00000360642 KCNH5Q8NCM2 988 aa8.87□□□□□ -0.99
CLCN3-202ENST00000360642 LMO7Q8WWI1 1683 aa8.87□□□□□ -0.99
CLCN3-202ENST00000360642 LRRFIP2Q9Y608 721 aaKnown RBP8.87□□□□□ -0.99
CLCN3-202ENST00000360642 CYP2E1P05181 493 aaPredicted RBP8.87□□□□□ -0.99
CLCN3-202ENST00000360642 DSC3Q14574 896 aa8.87□□□□□ -0.99
CLCN3-202ENST00000360642 SSH3Q8TE77 659 aa8.87□□□□□ -0.99
CLCN3-202ENST00000360642 FAM163AQ96GL9 167 aaPredicted RBP8.87□□□□□ -0.99
CLCN3-202ENST00000360642 PHAXQ9H814 394 aaKnown RBP8.87□□□□□ -0.99
CLCN3-202ENST00000360642 LGR6Q9HBX8 967 aa8.87□□□□□ -0.99
CLCN3-202ENST00000360642 FAM13AO94988 1023 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 MX1P20591 662 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 SKOR2Q2VWA4 1001 aaPredicted RBP8.86□□□□□ -0.99
CLCN3-202ENST00000360642 USPL1Q5W0Q7 1092 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 FAM43AQ8N2R8 423 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 CFHR5Q9BXR6 569 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 ISY1Q9ULR0 285 aaKnown RBP8.86□□□□□ -0.99
CLCN3-202ENST00000360642 PTCD1O75127 700 aaKnown RBP8.86□□□□□ -0.99
CLCN3-202ENST00000360642 VAMP1P23763 118 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 GPR152Q8TDT2 470 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 SRCIN1Q9C0H9 1055 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 STIM2Q9P246 746 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 RGPD2P0DJD1 1756 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 CCDC144BQ3MJ40 725 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 ESCO1Q5FWF5 840 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 IL17RAQ96F46 866 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 ZNF232Q9UNY5 417 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 SLIT3O75094 1523 aa8.86□□□□□ -0.99
CLCN3-202ENST00000360642 AOX1Q06278 1338 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 OPLAHO14841 1288 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 UBTFL1P0CB47 393 aaPredicted RBP8.85□□□□□ -0.99
CLCN3-202ENST00000360642 DGKZQ13574 1117 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 AKAP4Q5JQC9 854 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 TSHZ3Q63HK5 1081 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 ESYT1Q9BSJ8 1104 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 CCSER2Q9H7U1 834 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms