RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 NBPF9Q3BBW0 867 aa7.84□□□□□ -1.15
SUDS3-201ENST00000360286 CFAP100Q494V2 611 aa7.84□□□□□ -1.15
SUDS3-201ENST00000360286 OGFOD1Q8N543 542 aa7.84□□□□□ -1.15
SUDS3-201ENST00000360286 EDC3Q96F86 508 aaKnown RBP7.84□□□□□ -1.15
SUDS3-201ENST00000360286 CCDC136Q96JN2 1154 aa7.84□□□□□ -1.15
SUDS3-201ENST00000360286 DNAJC2Q99543 621 aaKnown RBP7.84□□□□□ -1.15
SUDS3-201ENST00000360286 PIH1D3Q9NQM4 214 aaKnown RBP7.84□□□□□ -1.15
SUDS3-201ENST00000360286 ECHDC1Q9NTX5 307 aa7.84□□□□□ -1.15
SUDS3-201ENST00000360286 HDAC9Q9UKV0 1011 aa7.84□□□□□ -1.15
SUDS3-201ENST00000360286 AOX1Q06278 1338 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 PDS5AQ29RF7 1337 aaKnown RBP7.83□□□□□ -1.16
SUDS3-201ENST00000360286 SALL1Q9NSC2 1324 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 LDHBP07195 334 aaKnown RBP7.83□□□□□ -1.16
SUDS3-201ENST00000360286 CRKP46108 304 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 RBM5P52756 815 aaKnown RBP eCLIP7.83□□□□□ -1.16
SUDS3-201ENST00000360286 KIF4BQ2VIQ3 1234 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 USP50Q70EL3 339 aaPredicted RBP7.83□□□□□ -1.16
SUDS3-201ENST00000360286 SKAP1Q86WV1 359 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 PLEKHM2Q8IWE5 1019 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 PI4K2BQ8TCG2 481 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 ZNF384Q8TF68 577 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.83□□□□□ -1.16
SUDS3-201ENST00000360286 PRMT6Q96LA8 375 aaPredicted RBP7.83□□□□□ -1.16
SUDS3-201ENST00000360286 HAUS7Q99871 368 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 PPP4R2Q9NY27 417 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 RAI14Q9P0K7 980 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 LRP2BPQ9P2M1 347 aa7.83□□□□□ -1.16
SUDS3-201ENST00000360286 SCAF8Q9UPN6 1271 aaKnown RBP7.83□□□□□ -1.16
SUDS3-201ENST00000360286 GOLIM4O00461 696 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 WNT10BO00744 389 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 MX1P20591 662 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 PDE1AP54750 535 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 MECOMQ03112 1051 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 DLGAP5Q15398 846 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 DIXDC1Q155Q3 683 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 SLFNL1Q499Z3 407 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 ERICH6BQ5W0A0 696 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 MAP1SQ66K74 1059 aaPredicted RBP7.82□□□□□ -1.16
SUDS3-201ENST00000360286 SPTY2D1Q68D10 685 aaPredicted RBP7.82□□□□□ -1.16
SUDS3-201ENST00000360286 DLK2Q6UY11 383 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 CENPQQ7L2Z9 268 aaPredicted RBP7.82□□□□□ -1.16
SUDS3-201ENST00000360286 PNMA8AQ86V59 439 aaPredicted RBP7.82□□□□□ -1.16
SUDS3-201ENST00000360286 ZGPATQ8N5A5 531 aaKnown RBP7.82□□□□□ -1.16
SUDS3-201ENST00000360286 NSUN4Q96CB9 384 aaKnown RBP7.82□□□□□ -1.16
SUDS3-201ENST00000360286 GPATCH3Q96I76 525 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 ZBED3Q96IU2 234 aaPredicted RBP7.82□□□□□ -1.16
SUDS3-201ENST00000360286 MRIQ9BWK5 157 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 TDRD3Q9H7E2 651 aaKnown RBP7.82□□□□□ -1.16
SUDS3-201ENST00000360286 STAP2Q9UGK3 403 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 SERPINA10Q9UK55 444 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 SUGT1Q9Y2Z0 365 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 MYH2Q9UKX2 1941 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 ADAMTSL1Q8N6G6 1762 aa7.82□□□□□ -1.16
SUDS3-201ENST00000360286 TTC41PQ6P2S7 1318 aa7.81□□□□□ -1.16
SUDS3-201ENST00000360286 CLRN2A0PK11 232 aa7.81□□□□□ -1.16
SUDS3-201ENST00000360286 IDH1O75874 414 aaKnown RBP7.81□□□□□ -1.16
SUDS3-201ENST00000360286 TOMM70O94826 608 aa7.81□□□□□ -1.16
SUDS3-201ENST00000360286 CHGBP05060 677 aa7.81□□□□□ -1.16
SUDS3-201ENST00000360286 MMP14P50281 582 aa7.81□□□□□ -1.16
SUDS3-201ENST00000360286 HDLBPQ00341 1268 aaKnown RBP7.81□□□□□ -1.16
SUDS3-201ENST00000360286 FMR1Q06787 632 aaKnown RBP eCLIP7.81□□□□□ -1.16
SUDS3-201ENST00000360286 ANGEL2Q5VTE6 544 aaKnown RBP7.81□□□□□ -1.16
SUDS3-201ENST00000360286 APOBEC3HQ6NTF7 200 aaKnown RBP7.81□□□□□ -1.16
SUDS3-201ENST00000360286 CHADLQ6NUI6 762 aa7.81□□□□□ -1.16
SUDS3-201ENST00000360286 LDHDQ86WU2 507 aa7.81□□□□□ -1.16
SUDS3-201ENST00000360286 DZIP1Q86YF9 867 aaKnown RBP7.81□□□□□ -1.16
SUDS3-201ENST00000360286 MTMR14Q8NCE2 650 aa7.81□□□□□ -1.16
SUDS3-201ENST00000360286 TEKT1Q969V4 418 aa7.81□□□□□ -1.16
SUDS3-201ENST00000360286 PAG1Q9NWQ8 432 aa7.81□□□□□ -1.16
SUDS3-201ENST00000360286 PGAP2Q9UHJ9 254 aa7.81□□□□□ -1.16
SUDS3-201ENST00000360286 SPDYE2BA6NHP3 402 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 ERC2O15083 957 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 GLRX3O76003 335 aaKnown RBP7.8□□□□□ -1.16
SUDS3-201ENST00000360286 SPDYE6P0CI01 402 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 CYP7A1P22680 504 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 BTDP43251 543 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 CACNB3P54284 484 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 TTF1Q15361 905 aaPredicted RBP7.8□□□□□ -1.16
SUDS3-201ENST00000360286 PRAMEF18Q5VWM3 479 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 NAA16Q6N069 864 aaPredicted RBP7.8□□□□□ -1.16
SUDS3-201ENST00000360286 CDC42EP5Q6NZY7 148 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 HHIPL2Q6UWX4 724 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 ADGRA1Q86SQ6 560 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 USP48Q86UV5 1035 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 CNTROBQ8N137 903 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 MAGEB6Q8N7X4 407 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 RBM46Q8TBY0 533 aaKnown RBP7.8□□□□□ -1.16
SUDS3-201ENST00000360286 ZC3H15Q8WU90 426 aaKnown RBP7.8□□□□□ -1.16
SUDS3-201ENST00000360286 FAM163AQ96GL9 167 aaPredicted RBP7.8□□□□□ -1.16
SUDS3-201ENST00000360286 ZDHHC15Q96MV8 337 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 OSBPL3Q9H4L5 887 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 USP40Q9NVE5 1235 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 GGA3Q9NZ52 723 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 ZNF70Q9UC06 446 aaPredicted RBP7.8□□□□□ -1.16
SUDS3-201ENST00000360286 DAGLAQ9Y4D2 1042 aa7.8□□□□□ -1.16
SUDS3-201ENST00000360286 MAST3O60307 1309 aa7.79□□□□□ -1.16
SUDS3-201ENST00000360286 GPR75-ASB3A0A0A6YYF3 556 aa7.79□□□□□ -1.16
SUDS3-201ENST00000360286 ADM5C9JUS6 153 aa7.79□□□□□ -1.16
SUDS3-201ENST00000360286 TRAF5O00463 557 aa7.79□□□□□ -1.16
SUDS3-201ENST00000360286 ITGBL1O95965 494 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms