RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 DBN1Q16643 649 aa19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 DNAJC25Q9H1X3 360 aa19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 ACTN4O43707 911 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 MUM1Q2TAK8 710 aa19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 ANKRD50Q9ULJ7 1429 aa19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 GOLGA6CA6NDK9 693 aa19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 GOLGA6DP0CG33 693 aa19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 UTP14CQ5TAP6 766 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 GOLGA6AQ9NYA3 693 aa19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 UBL4BQ8N7F7 174 aa19.36■□□□□ 0.69
CACNA1A-201ENST00000360228 SPECC1L-ADORA2AF8WAN1 911 aa19.36■□□□□ 0.69
CACNA1A-201ENST00000360228 PPP2R3AQ06190 1150 aa19.36■□□□□ 0.69
CACNA1A-201ENST00000360228 STK38LQ9Y2H1 464 aa19.36■□□□□ 0.69
CACNA1A-201ENST00000360228 SMAP1Q8IYB5 467 aaPredicted RBP19.36■□□□□ 0.69
CACNA1A-201ENST00000360228 WDR44Q5JSH3 913 aa19.36■□□□□ 0.69
CACNA1A-201ENST00000360228 HAUS2Q9NVX0 235 aa19.36■□□□□ 0.69
CACNA1A-201ENST00000360228 ATP6V1E1P36543 226 aa19.36■□□□□ 0.69
CACNA1A-201ENST00000360228 RASSF2P50749 326 aa19.36■□□□□ 0.69
CACNA1A-201ENST00000360228 NSD3Q9BZ95 1437 aa19.36■□□□□ 0.69
CACNA1A-201ENST00000360228 KLF18A0A0U1RQI7 1052 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 ZNF622Q969S3 477 aaKnown RBP eCLIP19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 NACA2Q9H009 215 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 F6X3S4 739 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 CCT6AP40227 531 aaKnown RBP19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 TSHZ3Q63HK5 1081 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 USP48Q86UV5 1035 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 BCAP29Q9UHQ4 241 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 TPX2Q9ULW0 747 aaKnown RBP19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 LDHCP07864 332 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 CLCN1P35523 988 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 SNRKQ9NRH2 765 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 MAP3K2Q9Y2U5 619 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 RPS6KA2Q15349 733 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 LRRC2Q9BYS8 371 aa19.35■□□□□ 0.69
CACNA1A-201ENST00000360228 PDCD2Q16342 344 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 SYT10Q6XYQ8 523 aa19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 MRPS27Q92552 414 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 KRT2P35908 639 aa19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 ST5P78524 1137 aa19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 SF3A3Q12874 501 aaKnown RBP eCLIP19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 FAM200AQ8TCP9 573 aa19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 NECAB1Q8N987 351 aa19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 HDAC9Q9UKV0 1011 aa19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 PDZD8Q8NEN9 1154 aa19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 PICALMQ13492 652 aa19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 KLHL40Q2TBA0 621 aa19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 HOMEZQ8IX15 550 aa19.34■□□□□ 0.69
CACNA1A-201ENST00000360228 GIGYF1O75420 1035 aaPredicted RBP19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 EPB41P11171 864 aaKnown RBP19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 SP4Q02446 784 aa19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 RABEP2Q9H5N1 569 aa19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 THEGQ9P2T0 379 aa19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 FGD6Q6ZV73 1430 aa19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 VSIG1Q86XK7 387 aa19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 ATP2A3Q93084 1043 aa19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 OGFRQ9NZT2 677 aa19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 B4DLN1 442 aa19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 MRPL12P52815 198 aaKnown RBP19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 THUMPD2Q9BTF0 503 aaKnown RBP19.33■□□□□ 0.69
CACNA1A-201ENST00000360228 NOC2LQ9Y3T9 749 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-201ENST00000360228 SYF2O95926 243 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-201ENST00000360228 GOLGA4Q13439 2230 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-201ENST00000360228 LUC7L3O95232 432 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-201ENST00000360228 RFX1P22670 979 aa19.33■□□□□ 0.68
CACNA1A-201ENST00000360228 ESR2Q92731 530 aa19.33■□□□□ 0.68
CACNA1A-201ENST00000360228 CNNM2Q9H8M5 875 aa19.33■□□□□ 0.68
CACNA1A-201ENST00000360228 STX17P56962 302 aa19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 C8orf74Q6P047 294 aa19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 CCDC125Q86Z20 511 aa19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 F8W031 263 aaPredicted RBP19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 MAN1A1P33908 653 aa19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 LDHAL6AQ6ZMR3 332 aa19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 PNMA8AQ86V59 439 aaPredicted RBP19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 TRIM4Q9C037 500 aa19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 DDX21Q9NR30 783 aaKnown RBP eCLIP19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 TBC1D8O95759 1140 aa19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 MAP3K21Q5TCX8 1036 aa19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 HHATQ5VTY9 493 aa19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 TRAF1Q13077 416 aa19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 RRP36Q96EU6 259 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 FNBP1Q96RU3 617 aa19.32■□□□□ 0.68
CACNA1A-201ENST00000360228 HARSP12081 509 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 BIRC3Q13489 604 aa19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 TMTC2Q8N394 836 aa19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 IFNKQ9P0W0 207 aa19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 PLCB4Q15147 1175 aa19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 IFT20Q8IY31 132 aa19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 HAUS8Q9BT25 410 aa19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 CTNND2Q9UQB3 1225 aa19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 MGARPQ8TDB4 240 aa19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 Q9H521 79 aa19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 RPAINQ86UA6 219 aa19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 PPP4R1Q8TF05 950 aa19.31■□□□□ 0.68
CACNA1A-201ENST00000360228 TYRO3Q06418 890 aa19.3■□□□□ 0.68
CACNA1A-201ENST00000360228 DENND2CQ68D51 928 aa19.3■□□□□ 0.68
CACNA1A-201ENST00000360228 KRT3P12035 628 aa19.3■□□□□ 0.68
CACNA1A-201ENST00000360228 ALDH1L2Q3SY69 923 aa19.3■□□□□ 0.68
CACNA1A-201ENST00000360228 MICAL1Q8TDZ2 1067 aa19.3■□□□□ 0.68
CACNA1A-201ENST00000360228 SPDL1Q96EA4 605 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms