RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 EXOSC10Q01780 885 aaKnown RBP8.66□□□□□ -1.02
APP-206ENST00000359726 DDR1Q08345 913 aa8.66□□□□□ -1.02
APP-206ENST00000359726 CASP8Q14790 479 aa8.66□□□□□ -1.02
APP-206ENST00000359726 APTXQ7Z2E3 356 aaKnown RBP8.66□□□□□ -1.02
APP-206ENST00000359726 HOMER1Q86YM7 354 aa8.66□□□□□ -1.02
APP-206ENST00000359726 ERC1Q8IUD2 1116 aa8.66□□□□□ -1.02
APP-206ENST00000359726 BABAM1Q9NWV8 329 aa8.66□□□□□ -1.02
APP-206ENST00000359726 SPEF2Q9C093 1822 aa8.66□□□□□ -1.02
APP-206ENST00000359726 WASLO00401 505 aaPredicted RBP8.65□□□□□ -1.02
APP-206ENST00000359726 SASH1O94885 1247 aa8.65□□□□□ -1.02
APP-206ENST00000359726 AMPD2Q01433 879 aa8.65□□□□□ -1.02
APP-206ENST00000359726 WWC2Q6AWC2 1192 aa8.65□□□□□ -1.02
APP-206ENST00000359726 FBXL16Q8N461 479 aa8.65□□□□□ -1.02
APP-206ENST00000359726 PHAXQ9H814 394 aaKnown RBP8.65□□□□□ -1.02
APP-206ENST00000359726 SUFUQ9UMX1 484 aa8.65□□□□□ -1.02
APP-206ENST00000359726 A0A1B0GVL5 298 aa8.65□□□□□ -1.02
APP-206ENST00000359726 NUTM2FA1L443 756 aa8.65□□□□□ -1.02
APP-206ENST00000359726 AGPSO00116 658 aa8.65□□□□□ -1.02
APP-206ENST00000359726 CHMP4BP1P59074 171 aa8.65□□□□□ -1.02
APP-206ENST00000359726 STK3Q13188 491 aa8.65□□□□□ -1.02
APP-206ENST00000359726 NUTM2GQ5VZR2 741 aa8.65□□□□□ -1.02
APP-206ENST00000359726 KAZALD1Q96I82 304 aa8.65□□□□□ -1.02
APP-206ENST00000359726 COG3Q96JB2 828 aa8.65□□□□□ -1.02
APP-206ENST00000359726 MED15Q96RN5 788 aa8.65□□□□□ -1.02
APP-206ENST00000359726 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.65□□□□□ -1.02
APP-206ENST00000359726 POLR3EQ9NVU0 708 aa8.65□□□□□ -1.02
APP-206ENST00000359726 C5P01031 1676 aa8.65□□□□□ -1.03
APP-206ENST00000359726 RGPD2P0DJD1 1756 aa8.65□□□□□ -1.03
APP-206ENST00000359726 C11orf91Q3C1V1 193 aa8.65□□□□□ -1.03
APP-206ENST00000359726 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.65□□□□□ -1.03
APP-206ENST00000359726 SEC62Q99442 399 aaKnown RBP8.65□□□□□ -1.03
APP-206ENST00000359726 IRX2Q9BZI1 471 aaPredicted RBP8.65□□□□□ -1.03
APP-206ENST00000359726 UTYO14607 1347 aa8.65□□□□□ -1.03
APP-206ENST00000359726 NCKAP5LQ9HCH0 1330 aa8.65□□□□□ -1.03
APP-206ENST00000359726 COL22A1Q8NFW1 1626 aaPredicted RBP8.64□□□□□ -1.03
APP-206ENST00000359726 CCDC196A0A1B0GTZ2 297 aa8.64□□□□□ -1.03
APP-206ENST00000359726 EIF5P55010 431 aaKnown RBP8.64□□□□□ -1.03
APP-206ENST00000359726 HSP90AB2PQ58FF8 381 aa8.64□□□□□ -1.03
APP-206ENST00000359726 CCDC73Q6ZRK6 1079 aa8.64□□□□□ -1.03
APP-206ENST00000359726 Q6ZUG5 572 aa8.64□□□□□ -1.03
APP-206ENST00000359726 STAG1Q8WVM7 1258 aa8.64□□□□□ -1.03
APP-206ENST00000359726 FAM204AQ9H8W3 233 aa8.64□□□□□ -1.03
APP-206ENST00000359726 PTPRUQ92729 1446 aa8.64□□□□□ -1.03
APP-206ENST00000359726 LTN1O94822 1766 aa8.64□□□□□ -1.03
APP-206ENST00000359726 HIP1O00291 1037 aa8.64□□□□□ -1.03
APP-206ENST00000359726 TFRCP02786 760 aaKnown RBP8.64□□□□□ -1.03
APP-206ENST00000359726 CDC27P30260 824 aa8.64□□□□□ -1.03
APP-206ENST00000359726 PBX1P40424 430 aa8.64□□□□□ -1.03
APP-206ENST00000359726 INHBEP58166 350 aa8.64□□□□□ -1.03
APP-206ENST00000359726 MDM2Q00987 491 aaPredicted RBP8.64□□□□□ -1.03
APP-206ENST00000359726 TEX13AQ9BXU3 409 aaPredicted RBP8.64□□□□□ -1.03
APP-206ENST00000359726 PLEKHA4Q9H4M7 779 aa8.64□□□□□ -1.03
APP-206ENST00000359726 TLR7Q9NYK1 1049 aaKnown RBP8.64□□□□□ -1.03
APP-206ENST00000359726 CDC23Q9UJX2 597 aa8.64□□□□□ -1.03
APP-206ENST00000359726 CLIC4Q9Y696 253 aa8.64□□□□□ -1.03
APP-206ENST00000359726 PALLDQ8WX93 1383 aa8.64□□□□□ -1.03
APP-206ENST00000359726 PHRF1Q9P1Y6 1649 aaKnown RBP8.64□□□□□ -1.03
APP-206ENST00000359726 USP6P35125 1406 aa8.64□□□□□ -1.03
APP-206ENST00000359726 GNG11P61952 73 aa8.63□□□□□ -1.03
APP-206ENST00000359726 CEBPZQ03701 1054 aaKnown RBP8.63□□□□□ -1.03
APP-206ENST00000359726 ARHGEF25Q86VW2 580 aa8.63□□□□□ -1.03
APP-206ENST00000359726 FOXP4Q8IVH2 680 aaPredicted RBP8.63□□□□□ -1.03
APP-206ENST00000359726 POTEB2H3BUK9 544 aa8.63□□□□□ -1.03
APP-206ENST00000359726 CYP21A2P08686 494 aa8.63□□□□□ -1.03
APP-206ENST00000359726 LMOD1P29536 600 aaPredicted RBP8.63□□□□□ -1.03
APP-206ENST00000359726 PDE4BQ07343 736 aa8.63□□□□□ -1.03
APP-206ENST00000359726 PTPN21Q16825 1174 aa8.63□□□□□ -1.03
APP-206ENST00000359726 HSP90AB4PQ58FF6 505 aa8.63□□□□□ -1.03
APP-206ENST00000359726 EAF2Q96CJ1 260 aaPredicted RBP8.63□□□□□ -1.03
APP-206ENST00000359726 FAXDC2Q96IV6 333 aa8.63□□□□□ -1.03
APP-206ENST00000359726 BAG1Q99933 345 aaPredicted RBP8.63□□□□□ -1.03
APP-206ENST00000359726 PAGR1Q9BTK6 254 aa8.63□□□□□ -1.03
APP-206ENST00000359726 DEF6Q9H4E7 631 aa8.63□□□□□ -1.03
APP-206ENST00000359726 SENP3Q9H4L4 574 aaPredicted RBP8.63□□□□□ -1.03
APP-206ENST00000359726 HPCAL4Q9UM19 191 aa8.63□□□□□ -1.03
APP-206ENST00000359726 PTPDC1A2A3K4 754 aa8.63□□□□□ -1.03
APP-206ENST00000359726 WDHD1O75717 1129 aaPredicted RBP8.63□□□□□ -1.03
APP-206ENST00000359726 ZNF202O95125 648 aa8.63□□□□□ -1.03
APP-206ENST00000359726 YEATS4O95619 227 aa8.63□□□□□ -1.03
APP-206ENST00000359726 MTF1Q14872 753 aa8.63□□□□□ -1.03
APP-206ENST00000359726 BANK1Q8NDB2 785 aa8.63□□□□□ -1.03
APP-206ENST00000359726 TACO1Q9BSH4 297 aaKnown RBP8.63□□□□□ -1.03
APP-206ENST00000359726 STK31Q9BXU1 1019 aa8.63□□□□□ -1.03
APP-206ENST00000359726 MCM8Q9UJA3 840 aa8.63□□□□□ -1.03
APP-206ENST00000359726 MYH7P12883 1935 aa8.63□□□□□ -1.03
APP-206ENST00000359726 AFDNP55196 1824 aaKnown RBP8.62□□□□□ -1.03
APP-206ENST00000359726 GPTP24298 496 aa8.62□□□□□ -1.03
APP-206ENST00000359726 UBASH3AP57075 661 aa8.62□□□□□ -1.03
APP-206ENST00000359726 TUBB4BP68371 445 aa8.62□□□□□ -1.03
APP-206ENST00000359726 MCM6Q14566 821 aa8.62□□□□□ -1.03
APP-206ENST00000359726 DNAJC21Q5F1R6 531 aaKnown RBP8.62□□□□□ -1.03
APP-206ENST00000359726 RAD9BQ6WBX8 426 aa8.62□□□□□ -1.03
APP-206ENST00000359726 ELOA2Q8IYF1 753 aaPredicted RBP8.62□□□□□ -1.03
APP-206ENST00000359726 IL17REQ8NFR9 667 aa8.62□□□□□ -1.03
APP-206ENST00000359726 NEK1Q96PY6 1258 aa8.62□□□□□ -1.03
APP-206ENST00000359726 C19orf44Q9H6X5 657 aa8.62□□□□□ -1.03
APP-206ENST00000359726 ADGRG1Q9Y653 693 aa8.62□□□□□ -1.03
APP-206ENST00000359726 RNF40O75150 1001 aa8.62□□□□□ -1.03
APP-206ENST00000359726 CMA1P23946 247 aa8.62□□□□□ -1.03
APP-206ENST00000359726 SATB1Q01826 763 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms