RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 SEMA3EO15041 775 aa12.84□□□□□ -0.35
TRAPPC4-201ENST00000359005 FGFR2P21802 821 aa12.84□□□□□ -0.35
TRAPPC4-201ENST00000359005 CHRNDQ07001 517 aa12.84□□□□□ -0.35
TRAPPC4-201ENST00000359005 MAP3K12Q12852 859 aa12.84□□□□□ -0.35
TRAPPC4-201ENST00000359005 ANKRD1Q15327 319 aa12.84□□□□□ -0.35
TRAPPC4-201ENST00000359005 DLK2Q6UY11 383 aa12.84□□□□□ -0.35
TRAPPC4-201ENST00000359005 VPS37DQ86XT2 251 aa12.84□□□□□ -0.35
TRAPPC4-201ENST00000359005 SUPT20HQ8NEM7 779 aa12.84□□□□□ -0.35
TRAPPC4-201ENST00000359005 GPRC5DQ9NZD1 345 aa12.84□□□□□ -0.35
TRAPPC4-201ENST00000359005 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC4-201ENST00000359005 DUOX1Q9NRD9 1551 aa12.84□□□□□ -0.35
TRAPPC4-201ENST00000359005 MED23Q9ULK4 1368 aa12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 C6orf229H3BNL8 230 aa12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 HMGB1P09429 215 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 PDIA4P13667 645 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 SLC4A3P48751 1232 aa12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 WASHC4Q2M389 1173 aa12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 CCDC102BQ68D86 513 aa12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 CIAPIN1Q6FI81 312 aa12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 ANP32EQ9BTT0 268 aa12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 DSCC1Q9BVC3 393 aa12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 MKRN1Q9UHC7 482 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 CYP46A1Q9Y6A2 500 aa12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 DICER1Q9UPY3 1922 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-201ENST00000359005 TAF1P21675 1872 aa12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 LTBP1Q14766 1721 aa12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 TRAF5O00463 557 aa12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 PSMD14O00487 310 aa12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 EGFRP00533 1210 aa12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 PTMSP20962 102 aa12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 ZMYM1Q5SVZ6 1142 aa12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 PNMA8AQ86V59 439 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 TRPM4Q8TD43 1214 aa12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 APPBP2Q92624 585 aa12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 RBM8AQ9Y5S9 174 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-201ENST00000359005 A0A0D9SFI3 127 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 ZBTB22O15209 634 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 ADORA1P30542 326 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 NECTIN1Q15223 517 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 UBE3CQ15386 1083 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 TSGA10IPQ3SY00 556 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 CST9Q5W186 159 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 SPATA5Q8NB90 893 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 KCNB2Q92953 911 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 ZSCAN31Q96LW9 406 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 FAM227BQ96M60 508 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 DENND2AQ9ULE3 1009 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 MINPP1Q9UNW1 487 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 LEMD3Q9Y2U8 911 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 SNX14Q9Y5W7 946 aa12.81□□□□□ -0.36
TRAPPC4-201ENST00000359005 SNAP23O00161 211 aa12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 TAF5LO75529 589 aa12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 UFL1O94874 794 aa12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 LMOD1P29536 600 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 NUCB2P80303 420 aa12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 CREB3L3Q68CJ9 461 aa12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 USP50Q70EL3 339 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 SAMD7Q7Z3H4 446 aa12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 ZGPATQ8N5A5 531 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 INTS4Q96HW7 963 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 SLKQ9H2G2 1235 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 ANKIB1Q9P2G1 1089 aa12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 PDS5AQ29RF7 1337 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-201ENST00000359005 ECE2O60344 883 aa12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 FRAT2O75474 233 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 GNAT2P19087 354 aa12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 KLRK1P26718 216 aa12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 MCAMP43121 646 aa12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 ZAP70P43403 619 aa12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 BLOC1S2Q6QNY1 142 aa12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 TXNRD3Q86VQ6 643 aa12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 HELBQ8NG08 1087 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 SH2B1Q9NRF2 756 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 ADARB2Q9NS39 739 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 PGAP2Q9UHJ9 254 aa12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 GGA1Q9UJY5 639 aa12.79□□□□□ -0.36
TRAPPC4-201ENST00000359005 TMEM88BA6NKF7 163 aa12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 SLC27A2O14975 620 aa12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 IDH1O75874 414 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 CASTP20810 708 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 VEGFBP49765 207 aa12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 TNIP1Q15025 636 aa12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 IMMTQ16891 758 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 SLC9C2Q5TAH2 1124 aa12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 SPTY2D1Q68D10 685 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 MICALL2Q8IY33 904 aa12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 JAKMIP1Q96N16 626 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 MXD3Q9BW11 206 aa12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 GLIS2Q9BZE0 524 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 ZC3H12CQ9C0D7 883 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 PDRG1Q9NUG6 133 aa12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 XDHP47989 1333 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms