RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 PFKFB2O60825 505 aa16.48■□□□□ 0.23
SIRPA-202ENST00000358771 CRKLP46109 303 aaKnown RBP16.48■□□□□ 0.23
SIRPA-202ENST00000358771 SDR42E1Q8WUS8 393 aa16.48■□□□□ 0.23
SIRPA-202ENST00000358771 MAGEB6P1A0A0J9YX57 407 aa16.47■□□□□ 0.23
SIRPA-202ENST00000358771 RABL6Q3YEC7 729 aaPredicted RBP16.47■□□□□ 0.23
SIRPA-202ENST00000358771 NSUN7Q8NE18 718 aaKnown RBP16.47■□□□□ 0.23
SIRPA-202ENST00000358771 PCMTD1Q96MG8 357 aaPredicted RBP16.47■□□□□ 0.23
SIRPA-202ENST00000358771 LLPHQ9BRT6 129 aaKnown RBP16.47■□□□□ 0.23
SIRPA-202ENST00000358771 STX8Q9UNK0 236 aa16.47■□□□□ 0.23
SIRPA-202ENST00000358771 RFX5P48382 616 aaPredicted RBP16.47■□□□□ 0.23
SIRPA-202ENST00000358771 KRT23Q9C075 422 aa16.47■□□□□ 0.23
SIRPA-202ENST00000358771 C3P01024 1663 aa16.47■□□□□ 0.23
SIRPA-202ENST00000358771 INCENPQ9NQS7 918 aa16.47■□□□□ 0.23
SIRPA-202ENST00000358771 STOX1Q6ZVD7 989 aa16.46■□□□□ 0.23
SIRPA-202ENST00000358771 TMC6Q7Z403 805 aa16.46■□□□□ 0.23
SIRPA-202ENST00000358771 ESR2Q92731 530 aa16.46■□□□□ 0.23
SIRPA-202ENST00000358771 C6orf229H3BNL8 230 aa16.46■□□□□ 0.23
SIRPA-202ENST00000358771 MCAMP43121 646 aa16.46■□□□□ 0.23
SIRPA-202ENST00000358771 SMARCC1Q92922 1105 aaPredicted RBP16.46■□□□□ 0.23
SIRPA-202ENST00000358771 CIAO1O76071 339 aa16.46■□□□□ 0.23
SIRPA-202ENST00000358771 IFIT1BQ5T764 474 aaKnown RBP16.46■□□□□ 0.23
SIRPA-202ENST00000358771 CLSTN2Q9H4D0 955 aa16.46■□□□□ 0.23
SIRPA-202ENST00000358771 OFD1O75665 1012 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 CCDC112Q8NEF3 446 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 GPR108Q9NPR9 543 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
SIRPA-202ENST00000358771 AK7Q96M32 723 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 AIFM3Q96NN9 605 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 KCNJ14Q9UNX9 436 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 USP42Q9H9J4 1324 aaKnown RBP16.45■□□□□ 0.22
SIRPA-202ENST00000358771 KDM6AO15550 1401 aaPredicted RBP16.45■□□□□ 0.22
SIRPA-202ENST00000358771 PXDNLA1KZ92 1463 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 TOM1O60784 492 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 SFPQP23246 707 aaKnown RBP eCLIP16.45■□□□□ 0.22
SIRPA-202ENST00000358771 NLRP5P59047 1200 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 COL9A3Q14050 684 aaPredicted RBP16.45■□□□□ 0.22
SIRPA-202ENST00000358771 DHX8Q14562 1220 aaKnown RBP16.45■□□□□ 0.22
SIRPA-202ENST00000358771 CNNM2Q9H8M5 875 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 PRKAB2O43741 272 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 TPM1P09493 284 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 TNNT1P13805 278 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 HS1BP3Q53T59 392 aa16.45■□□□□ 0.22
SIRPA-202ENST00000358771 MON2Q7Z3U7 1717 aa16.44■□□□□ 0.22
SIRPA-202ENST00000358771 SUSD4Q5VX71 490 aa16.44■□□□□ 0.22
SIRPA-202ENST00000358771 TRIM34Q9BYJ4 488 aa16.44■□□□□ 0.22
SIRPA-202ENST00000358771 PIH1D3Q9NQM4 214 aaKnown RBP16.44■□□□□ 0.22
SIRPA-202ENST00000358771 AFMP43652 599 aa16.44■□□□□ 0.22
SIRPA-202ENST00000358771 PARP10Q53GL7 1025 aa16.44■□□□□ 0.22
SIRPA-202ENST00000358771 KRT40Q6A162 431 aa16.44■□□□□ 0.22
SIRPA-202ENST00000358771 RPGRQ92834 1020 aaKnown RBP16.44■□□□□ 0.22
SIRPA-202ENST00000358771 SMTNL1A8MU46 457 aa16.43■□□□□ 0.22
SIRPA-202ENST00000358771 TPTE2Q6XPS3 522 aa16.43■□□□□ 0.22
SIRPA-202ENST00000358771 ANKRD20A12PQ8NF67 263 aa16.43■□□□□ 0.22
SIRPA-202ENST00000358771 ZNF274Q96GC6 653 aaPredicted RBP16.43■□□□□ 0.22
SIRPA-202ENST00000358771 ISCA1Q9BUE6 129 aa16.43■□□□□ 0.22
SIRPA-202ENST00000358771 RGPD8O14715 1765 aaPredicted RBP16.43■□□□□ 0.22
SIRPA-202ENST00000358771 RPAP1Q9BWH6 1393 aaPredicted RBP16.43■□□□□ 0.22
SIRPA-202ENST00000358771 F8W031 263 aaPredicted RBP16.43■□□□□ 0.22
SIRPA-202ENST00000358771 IL6STP40189 918 aaPredicted RBP16.43■□□□□ 0.22
SIRPA-202ENST00000358771 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
SIRPA-202ENST00000358771 ANO1Q5XXA6 986 aa16.43■□□□□ 0.22
SIRPA-202ENST00000358771 IFNL3Q8IZI9 196 aa16.43■□□□□ 0.22
SIRPA-202ENST00000358771 ZNF444Q8N0Y2 327 aaPredicted RBP16.43■□□□□ 0.22
SIRPA-202ENST00000358771 MCM9Q9NXL9 1143 aa16.43■□□□□ 0.22
SIRPA-202ENST00000358771 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
SIRPA-202ENST00000358771 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
SIRPA-202ENST00000358771 ZNF609O15014 1411 aa16.42■□□□□ 0.22
SIRPA-202ENST00000358771 CHRNDQ07001 517 aa16.42■□□□□ 0.22
SIRPA-202ENST00000358771 UTYO14607 1347 aa16.42■□□□□ 0.22
SIRPA-202ENST00000358771 MROH5Q6ZUA9 1318 aa16.42■□□□□ 0.22
SIRPA-202ENST00000358771 CPLX3Q8WVH0 158 aa16.42■□□□□ 0.22
SIRPA-202ENST00000358771 TMX1Q9H3N1 280 aa16.42■□□□□ 0.22
SIRPA-202ENST00000358771 TXLNAP40222 546 aa16.42■□□□□ 0.22
SIRPA-202ENST00000358771 TSR1Q2NL82 804 aaKnown RBP16.42■□□□□ 0.22
SIRPA-202ENST00000358771 MYSM1Q5VVJ2 828 aa16.42■□□□□ 0.22
SIRPA-202ENST00000358771 TSC1Q92574 1164 aa16.42■□□□□ 0.22
SIRPA-202ENST00000358771 RBM5P52756 815 aaKnown RBP eCLIP16.41■□□□□ 0.22
SIRPA-202ENST00000358771 PTPN14Q15678 1187 aa16.41■□□□□ 0.22
SIRPA-202ENST00000358771 CRNKL1Q9BZJ0 848 aaKnown RBP16.41■□□□□ 0.22
SIRPA-202ENST00000358771 CABP5Q9NP86 173 aa16.41■□□□□ 0.22
SIRPA-202ENST00000358771 CLIC4Q9Y696 253 aa16.41■□□□□ 0.22
SIRPA-202ENST00000358771 SKILP12757 684 aa16.41■□□□□ 0.22
SIRPA-202ENST00000358771 DIS3L2Q8IYB7 885 aaKnown RBP16.41■□□□□ 0.22
SIRPA-202ENST00000358771 KCNQ2O43526 872 aa16.41■□□□□ 0.22
SIRPA-202ENST00000358771 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
SIRPA-202ENST00000358771 LRMPQ12912 555 aa16.41■□□□□ 0.22
SIRPA-202ENST00000358771 RASGRF1Q13972 1273 aa16.41■□□□□ 0.22
SIRPA-202ENST00000358771 BRAPQ7Z569 592 aa16.41■□□□□ 0.22
SIRPA-202ENST00000358771 MNS1Q8NEH6 495 aa16.41■□□□□ 0.22
SIRPA-202ENST00000358771 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
SIRPA-202ENST00000358771 ADD2P35612 726 aa16.4■□□□□ 0.22
SIRPA-202ENST00000358771 PCDHA7Q9UN72 937 aa16.4■□□□□ 0.22
SIRPA-202ENST00000358771 AKNAD1Q5T1N1 836 aa16.4■□□□□ 0.22
SIRPA-202ENST00000358771 ZSCAN29Q8IWY8 852 aaPredicted RBP16.4■□□□□ 0.22
SIRPA-202ENST00000358771 TMEM87BQ96K49 555 aa16.4■□□□□ 0.22
SIRPA-202ENST00000358771 CEP131Q9UPN4 1083 aa16.4■□□□□ 0.22
SIRPA-202ENST00000358771 PATL2C9JE40 543 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms