RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 OCSTAMPQ9BR26 566 aa8.57□□□□□ -1.04
TNFSF11-202ENST00000358545 FAM196BA6NMK8 535 aa8.56□□□□□ -1.04
TNFSF11-202ENST00000358545 CAMTA2O94983 1202 aa8.56□□□□□ -1.04
TNFSF11-202ENST00000358545 STARD3NLO95772 234 aa8.56□□□□□ -1.04
TNFSF11-202ENST00000358545 AKAP4Q5JQC9 854 aa8.56□□□□□ -1.04
TNFSF11-202ENST00000358545 SULT6B1Q6IMI4 303 aa8.56□□□□□ -1.04
TNFSF11-202ENST00000358545 CTU1Q7Z7A3 348 aaKnown RBP8.56□□□□□ -1.04
TNFSF11-202ENST00000358545 NBPF5PQ86XG9 351 aaPredicted RBP8.56□□□□□ -1.04
TNFSF11-202ENST00000358545 STK32AQ8WU08 396 aa8.56□□□□□ -1.04
TNFSF11-202ENST00000358545 SAGE1Q9NXZ1 904 aa8.56□□□□□ -1.04
TNFSF11-202ENST00000358545 KIAA0100Q14667 2235 aaKnown RBP8.56□□□□□ -1.04
TNFSF11-202ENST00000358545 RNMTO43148 476 aaKnown RBP8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 TRPA1O75762 1119 aa8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 HUNKP57058 714 aa8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 NCOA4Q13772 614 aa8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 FOXD4L5Q5VV16 416 aaPredicted RBP8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 RNF135Q8IUD6 432 aa8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 PHTF2Q8N3S3 785 aa8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 LARGE2Q8N3Y3 721 aa8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 FOXD4L4Q8WXT5 416 aaPredicted RBP8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 PSMD1Q99460 953 aa8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 ADARB2Q9NS39 739 aaKnown RBP8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 SZT2Q5T011 3432 aa8.55□□□□□ -1.04
TNFSF11-202ENST00000358545 LZTS3O60299 673 aaPredicted RBP8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 IL6STP40189 918 aaPredicted RBP8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 FXR1P51114 621 aaKnown RBP eCLIP8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 CRTC2Q53ET0 693 aaPredicted RBP8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 NYAP1Q6ZVC0 841 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 ADAM32Q8TC27 787 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 RNF186Q9NXI6 227 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 GPRC5DQ9NZD1 345 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 RBBP6Q7Z6E9 1792 aaKnown RBP8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 PAPPA2Q9BXP8 1791 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 KLRG2A4D1S0 409 aaPredicted RBP8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 FAM155AB1AL88 458 aaPredicted RBP8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L15C9J2P7 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L10C9JJH3 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L13C9JLJ4 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L12C9JPN9 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L11C9JVI0 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L21D6R901 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L18D6R9N7 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L22D6RA61 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L17D6RBQ6 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L19D6RCP7 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L20D6RJB6 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 RASA1P20936 1047 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 KIF23Q02241 960 aaPredicted RBP8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 USP17L24Q0WX57 530 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 CCDC27Q2M243 656 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 SND1Q7KZF4 910 aaKnown RBP eCLIP8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 SLC51AQ86UW1 340 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 TTC5Q8N0Z6 440 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 PLPP7Q8NBV4 271 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 ZNF516Q92618 1163 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 ARHGAP9Q9BRR9 750 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 HEG1Q9ULI3 1381 aa8.54□□□□□ -1.04
TNFSF11-202ENST00000358545 NUP98P52948 1817 aa8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 FAM177BA6PVY3 158 aa8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 ATP5J2-PTCD1G3V325 749 aa8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 A1BGP04217 495 aa8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 PTK7Q13308 1070 aa8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 TJAP1Q5JTD0 557 aa8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 RGMBQ6NW40 437 aa8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 DLK2Q6UY11 383 aa8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 ZBTB33Q86T24 672 aa8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 NIM1KQ8IY84 436 aa8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 ZNF496Q96IT1 587 aaPredicted RBP8.53□□□□□ -1.04
TNFSF11-202ENST00000358545 CENPFP49454 3210 aa8.52□□□□□ -1.04
TNFSF11-202ENST00000358545 HTTP42858 3142 aa8.52□□□□□ -1.04
TNFSF11-202ENST00000358545 ADH1BP00325 375 aa8.52□□□□□ -1.05
TNFSF11-202ENST00000358545 ALDH1B1P30837 517 aa8.52□□□□□ -1.05
TNFSF11-202ENST00000358545 PIP4K2AP48426 406 aaPredicted RBP8.52□□□□□ -1.05
TNFSF11-202ENST00000358545 MAP7D1Q3KQU3 841 aa8.52□□□□□ -1.05
TNFSF11-202ENST00000358545 FAM200AQ8TCP9 573 aa8.52□□□□□ -1.05
TNFSF11-202ENST00000358545 TRPM4Q8TD43 1214 aa8.52□□□□□ -1.05
TNFSF11-202ENST00000358545 UNC93B1Q9H1C4 597 aa8.52□□□□□ -1.05
TNFSF11-202ENST00000358545 NPC1L1Q9UHC9 1359 aa8.51□□□□□ -1.05
TNFSF11-202ENST00000358545 GMPSP49915 693 aaPredicted RBP8.51□□□□□ -1.05
TNFSF11-202ENST00000358545 HIRAP54198 1017 aaPredicted RBP8.51□□□□□ -1.05
TNFSF11-202ENST00000358545 CDC37L1Q7L3B6 337 aa8.51□□□□□ -1.05
TNFSF11-202ENST00000358545 PGAP2Q9UHJ9 254 aa8.51□□□□□ -1.05
TNFSF11-202ENST00000358545 A0A0C4DFX4 3053 aa8.51□□□□□ -1.05
TNFSF11-202ENST00000358545 ABCC12Q96J65 1359 aa8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 DLL1O00548 723 aa8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 PPIP5K2O43314 1243 aa8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 ZNF157P51786 506 aaPredicted RBP8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 AOC3Q16853 763 aa8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 EML3Q32P44 896 aa8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 PTCRAQ6ISU1 281 aaPredicted RBP8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 TPTE2Q6XPS3 522 aa8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 SH3BP5LQ7L8J4 393 aa8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 USP48Q86UV5 1035 aa8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 CCER1Q8TC90 406 aaPredicted RBP8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 TEX13AQ9BXU3 409 aaPredicted RBP8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 NIP7Q9Y221 180 aaKnown RBP eCLIP8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 BRCA2P51587 3418 aa8.5□□□□□ -1.05
TNFSF11-202ENST00000358545 SHTN1A0MZ66 631 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms