RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CREB3L3Q68CJ9 461 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 TMTC1Q8IUR5 882 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 MKNK2Q9HBH9 465 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 COL17A1Q9UMD9 1497 aaPredicted RBP9.85□□□□□ -0.83
COL6A6-201ENST00000358511 MUM1Q2TAK8 710 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 MAP7D1Q3KQU3 841 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 JRKLQ9Y4A0 524 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 TRIM75PA6NK02 468 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 PRC1O43663 620 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 RTN1Q16799 776 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 LLPHQ9BRT6 129 aaKnown RBP9.85□□□□□ -0.83
COL6A6-201ENST00000358511 HAND2P61296 217 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 MEIS3Q99687 375 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 SUDS3Q9H7L9 328 aaPredicted RBP9.84□□□□□ -0.83
COL6A6-201ENST00000358511 TSKSQ9UJT2 592 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 RIPOR2Q9Y4F9 1068 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 A0A1B0GVL5 298 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 TLDC2A0PJX2 215 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 GOLGA8KD6RF30 607 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 CHMLP26374 656 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 SF3B2Q13435 895 aaKnown RBP9.84□□□□□ -0.83
COL6A6-201ENST00000358511 LRRC8AQ8IWT6 810 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 NOX5Q96PH1 765 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 BAIAP2L1Q9UHR4 511 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 MSH6P52701 1360 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 LIG3P49916 1009 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 CLUL1Q15846 466 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 ARHGEF2Q92974 986 aaKnown RBP9.84□□□□□ -0.83
COL6A6-201ENST00000358511 ZRANB1Q9UGI0 708 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 MTUS1Q9ULD2 1270 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 ABCA5Q8WWZ7 1642 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 CASQ2O14958 399 aaPredicted RBP9.84□□□□□ -0.83
COL6A6-201ENST00000358511 ASIC1P78348 528 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 ARID5AQ03989 594 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 WTAPQ15007 396 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 TCEANC2Q96MN5 208 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 LRRC2Q9BYS8 371 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 GKAP1Q5VSY0 366 aaPredicted RBP9.84□□□□□ -0.83
COL6A6-201ENST00000358511 SYCP3Q8IZU3 236 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 RABGAP1Q9Y3P9 1069 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 HIP1RO75146 1068 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 CFAP221Q4G0U5 840 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 WDR78Q5VTH9 848 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 SEPT14Q6ZU15 432 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 RABGGTAQ92696 567 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 MMRN2Q9H8L6 949 aa9.84□□□□□ -0.83
COL6A6-201ENST00000358511 TBCAO75347 108 aaKnown RBP9.84□□□□□ -0.83
COL6A6-201ENST00000358511 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.84□□□□□ -0.83
COL6A6-201ENST00000358511 DHX58Q96C10 678 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 HDAC9Q9UKV0 1011 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 AOX1Q06278 1338 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 PTPDC1A2A3K4 754 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 GADD45BO75293 160 aaPredicted RBP9.83□□□□□ -0.84
COL6A6-201ENST00000358511 DENND2CQ68D51 928 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 PPP4R3AQ6IN85 833 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 SSH2Q76I76 1423 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 SLC5A1P13866 664 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 ERMNQ8TAM6 284 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 PDE4BQ07343 736 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 CEP85Q6P2H3 762 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 APBB1IPQ7Z5R6 666 aaPredicted RBP9.83□□□□□ -0.84
COL6A6-201ENST00000358511 USP37Q86T82 979 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 EXOC4Q96A65 974 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 MAP3K2Q9Y2U5 619 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 DZIP1Q86YF9 867 aaKnown RBP9.83□□□□□ -0.84
COL6A6-201ENST00000358511 GBP7Q8N8V2 638 aaPredicted RBP9.83□□□□□ -0.84
COL6A6-201ENST00000358511 LEO1Q8WVC0 666 aaPredicted RBP9.83□□□□□ -0.84
COL6A6-201ENST00000358511 TRIM68Q6AZZ1 485 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 TBC1D31Q96DN5 1066 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 PDE11AQ9HCR9 933 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 CCDC61Q9Y6R9 512 aa9.83□□□□□ -0.84
COL6A6-201ENST00000358511 CDC25BP30305 580 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 CAVIN4Q5BKX8 364 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 CCDC63Q8NA47 563 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 IQUBQ8NA54 791 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 KDM5DQ9BY66 1539 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 SEL1L2Q5TEA6 688 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 AFAP1Q8N556 730 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 MRPL50Q8N5N7 158 aaKnown RBP9.82□□□□□ -0.84
COL6A6-201ENST00000358511 SECISBP2LQ93073 1101 aaKnown RBP9.82□□□□□ -0.84
COL6A6-201ENST00000358511 ODF2LQ9ULJ1 636 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 CTNND2Q9UQB3 1225 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 AMOTQ4VCS5 1084 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 SAR1BQ9Y6B6 198 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 CETN3O15182 167 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 ATF3P18847 181 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 BCAS4Q8TDM0 211 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 MRPS9P82933 396 aaKnown RBP9.82□□□□□ -0.84
COL6A6-201ENST00000358511 CFAP157Q5JU67 520 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 PSMC4P43686 418 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 ZBTB17Q13105 803 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 GPT2Q8TD30 523 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 CUL5Q93034 780 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 FERMT2Q96AC1 680 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 TPX2Q9ULW0 747 aaKnown RBP9.82□□□□□ -0.84
COL6A6-201ENST00000358511 ATP6V0A2Q9Y487 856 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 MYO10Q9HD67 2058 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 MRFAP1L1Q96HT8 127 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 RABEP2Q9H5N1 569 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 ZFYVE9O95405 1425 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms