RNA–Protein interactions for RNA: ENST00000357903.7

APP-204, Transcript of amyloid beta precursor protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APP, Length 3,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-204ENST00000357903 SETDB2Q96T68 719 aa18.74■□□□□ 0.59
APP-204ENST00000357903 ZSCAN16Q9H4T2 348 aaPredicted RBP18.74■□□□□ 0.59
APP-204ENST00000357903 SENP2Q9HC62 589 aa18.74■□□□□ 0.59
APP-204ENST00000357903 PGBD1Q96JS3 809 aa18.73■□□□□ 0.59
APP-204ENST00000357903 ADD2P35612 726 aa18.73■□□□□ 0.59
APP-204ENST00000357903 SAFBQ15424 915 aaKnown RBP eCLIP18.73■□□□□ 0.59
APP-204ENST00000357903 TBC1D10CQ8IV04 446 aa18.73■□□□□ 0.59
APP-204ENST00000357903 DCCP43146 1447 aa18.73■□□□□ 0.59
APP-204ENST00000357903 TOM1O60784 492 aa18.73■□□□□ 0.59
APP-204ENST00000357903 ZKSCAN5Q9Y2L8 839 aa18.73■□□□□ 0.59
APP-204ENST00000357903 UBE2Q2LH0YL09 131 aa18.72■□□□□ 0.59
APP-204ENST00000357903 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.72■□□□□ 0.59
APP-204ENST00000357903 DDX19AQ9NUU7 478 aaKnown RBP18.72■□□□□ 0.59
APP-204ENST00000357903 ANGEL1Q9UNK9 670 aaKnown RBP18.72■□□□□ 0.59
APP-204ENST00000357903 SMC2O95347 1197 aa18.71■□□□□ 0.59
APP-204ENST00000357903 KCNJ14Q9UNX9 436 aa18.71■□□□□ 0.59
APP-204ENST00000357903 LCORLQ8N3X6 602 aa18.71■□□□□ 0.59
APP-204ENST00000357903 CLIC4Q9Y696 253 aa18.71■□□□□ 0.59
APP-204ENST00000357903 CTDNEP1O95476 244 aa18.71■□□□□ 0.59
APP-204ENST00000357903 CSF1RP07333 972 aa18.71■□□□□ 0.59
APP-204ENST00000357903 IFNL3Q8IZI9 196 aa18.71■□□□□ 0.59
APP-204ENST00000357903 NLRP3Q96P20 1036 aa18.71■□□□□ 0.59
APP-204ENST00000357903 TRIM28Q13263 835 aaKnown RBP18.7■□□□□ 0.58
APP-204ENST00000357903 CYB5R4Q7L1T6 521 aa18.7■□□□□ 0.58
APP-204ENST00000357903 TRIM22Q8IYM9 498 aa18.7■□□□□ 0.58
APP-204ENST00000357903 LMO7Q8WWI1 1683 aa18.7■□□□□ 0.58
APP-204ENST00000357903 KDM3BQ7LBC6 1761 aa18.7■□□□□ 0.58
APP-204ENST00000357903 RESTQ13127 1097 aa18.7■□□□□ 0.58
APP-204ENST00000357903 FAM200AQ8TCP9 573 aa18.7■□□□□ 0.58
APP-204ENST00000357903 PALLDQ8WX93 1383 aa18.7■□□□□ 0.58
APP-204ENST00000357903 WTAPQ15007 396 aa18.7■□□□□ 0.58
APP-204ENST00000357903 CCDC186Q7Z3E2 898 aa18.7■□□□□ 0.58
APP-204ENST00000357903 GPR101Q96P66 508 aaPredicted RBP18.7■□□□□ 0.58
APP-204ENST00000357903 CBX8Q9HC52 389 aa18.7■□□□□ 0.58
APP-204ENST00000357903 PTGS1P23219 599 aa18.69■□□□□ 0.58
APP-204ENST00000357903 RFC4P35249 363 aa18.69■□□□□ 0.58
APP-204ENST00000357903 DYNLL1P63167 89 aaKnown RBP18.69■□□□□ 0.58
APP-204ENST00000357903 NAA16Q6N069 864 aaPredicted RBP18.69■□□□□ 0.58
APP-204ENST00000357903 BAZ2BQ9UIF8 2168 aaKnown RBP18.69■□□□□ 0.58
APP-204ENST00000357903 CCNL1Q9UK58 526 aaPredicted RBP18.69■□□□□ 0.58
APP-204ENST00000357903 RASSF8Q8NHQ8 419 aa18.69■□□□□ 0.58
APP-204ENST00000357903 AATFQ9NY61 560 aaKnown RBP eCLIP18.69■□□□□ 0.58
APP-204ENST00000357903 KCNB2Q92953 911 aa18.69■□□□□ 0.58
APP-204ENST00000357903 EIF5P55010 431 aaKnown RBP18.68■□□□□ 0.58
APP-204ENST00000357903 MAGEB6P1A0A0J9YX57 407 aa18.68■□□□□ 0.58
APP-204ENST00000357903 SMIM22K7EJ46 135 aa18.68■□□□□ 0.58
APP-204ENST00000357903 SPTLC2O15270 562 aa18.68■□□□□ 0.58
APP-204ENST00000357903 SSRP1Q08945 709 aaKnown RBP18.68■□□□□ 0.58
APP-204ENST00000357903 CELF1Q92879 486 aaKnown RBP18.68■□□□□ 0.58
APP-204ENST00000357903 ZSWIM5Q9P217 1185 aa18.68■□□□□ 0.58
APP-204ENST00000357903 KIF1AQ12756 1690 aa18.68■□□□□ 0.58
APP-204ENST00000357903 MROH5Q6ZUA9 1318 aa18.68■□□□□ 0.58
APP-204ENST00000357903 ZNF219Q9P2Y4 722 aaPredicted RBP18.67■□□□□ 0.58
APP-204ENST00000357903 NOL7Q9UMY1 257 aaKnown RBP18.67■□□□□ 0.58
APP-204ENST00000357903 CARMIL3Q8ND23 1372 aa18.67■□□□□ 0.58
APP-204ENST00000357903 EXOSC10Q01780 885 aaKnown RBP18.67■□□□□ 0.58
APP-204ENST00000357903 INTS5Q6P9B9 1019 aaKnown RBP18.67■□□□□ 0.58
APP-204ENST00000357903 DZIP1Q86YF9 867 aaKnown RBP18.67■□□□□ 0.58
APP-204ENST00000357903 TSC1Q92574 1164 aa18.67■□□□□ 0.58
APP-204ENST00000357903 UQCRHLA0A096LP55 91 aa18.67■□□□□ 0.58
APP-204ENST00000357903 UQCRHP07919 91 aa18.67■□□□□ 0.58
APP-204ENST00000357903 HSP90AA2PQ14568 343 aaPredicted RBP18.67■□□□□ 0.58
APP-204ENST00000357903 CDKL5O76039 1030 aa18.66■□□□□ 0.58
APP-204ENST00000357903 TSGA10IPQ3SY00 556 aa18.66■□□□□ 0.58
APP-204ENST00000357903 PARP10Q53GL7 1025 aa18.66■□□□□ 0.58
APP-204ENST00000357903 ZNF274Q96GC6 653 aaPredicted RBP18.66■□□□□ 0.58
APP-204ENST00000357903 NEDD4P46934 1319 aa18.66■□□□□ 0.58
APP-204ENST00000357903 G3V3G9 751 aa18.66■□□□□ 0.58
APP-204ENST00000357903 DCAF8Q5TAQ9 597 aa18.66■□□□□ 0.58
APP-204ENST00000357903 AOPEPQ8N6M6 819 aa18.66■□□□□ 0.58
APP-204ENST00000357903 MRPS27Q92552 414 aaKnown RBP18.66■□□□□ 0.58
APP-204ENST00000357903 SMARCC1Q92922 1105 aaPredicted RBP18.66■□□□□ 0.58
APP-204ENST00000357903 STRBPQ96SI9 672 aaKnown RBP18.66■□□□□ 0.58
APP-204ENST00000357903 CLIP2Q9UDT6 1046 aa18.66■□□□□ 0.58
APP-204ENST00000357903 NRBP1Q9UHY1 535 aa18.66■□□□□ 0.58
APP-204ENST00000357903 KRT40Q6A162 431 aa18.66■□□□□ 0.58
APP-204ENST00000357903 LLPHQ9BRT6 129 aaKnown RBP18.66■□□□□ 0.58
APP-204ENST00000357903 PCDHA7Q9UN72 937 aa18.66■□□□□ 0.58
APP-204ENST00000357903 RTCBQ9Y3I0 505 aaKnown RBP18.66■□□□□ 0.58
APP-204ENST00000357903 RTN1Q16799 776 aa18.65■□□□□ 0.58
APP-204ENST00000357903 PTPN21Q16825 1174 aa18.65■□□□□ 0.58
APP-204ENST00000357903 FAM47AQ5JRC9 791 aa18.65■□□□□ 0.58
APP-204ENST00000357903 C3orf67Q6ZVT6 689 aa18.65■□□□□ 0.58
APP-204ENST00000357903 MRVI1Q9Y6F6 885 aa18.65■□□□□ 0.58
APP-204ENST00000357903 ERVV-1B6SEH8 477 aa18.65■□□□□ 0.58
APP-204ENST00000357903 ANTXR2P58335 489 aa18.65■□□□□ 0.58
APP-204ENST00000357903 ZNF34Q8IZ26 560 aa18.65■□□□□ 0.58
APP-204ENST00000357903 CLIC6Q96NY7 704 aa18.65■□□□□ 0.58
APP-204ENST00000357903 CLSTN2Q9H4D0 955 aa18.65■□□□□ 0.58
APP-204ENST00000357903 USP21Q9UK80 565 aa18.65■□□□□ 0.58
APP-204ENST00000357903 PATL2C9JE40 543 aaKnown RBP18.65■□□□□ 0.58
APP-204ENST00000357903 F8W031 263 aaPredicted RBP18.65■□□□□ 0.58
APP-204ENST00000357903 LRMPQ12912 555 aa18.65■□□□□ 0.58
APP-204ENST00000357903 TBC1D9BQ66K14 1250 aa18.65■□□□□ 0.58
APP-204ENST00000357903 AK7Q96M32 723 aa18.65■□□□□ 0.58
APP-204ENST00000357903 TRMT1Q9NXH9 659 aaKnown RBP18.65■□□□□ 0.58
APP-204ENST00000357903 ZNF142P52746 1687 aaPredicted RBP18.65■□□□□ 0.58
APP-204ENST00000357903 TULP1O00294 542 aaPredicted RBP18.64■□□□□ 0.57
APP-204ENST00000357903 USP5P45974 858 aa18.64■□□□□ 0.57
APP-204ENST00000357903 APOA5Q6Q788 366 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms