RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.2■□□□□ 0.823e-8■■■□□ 15.3
IFT20-202ENST00000357896 CNKSR2Q8WXI2 1034 aa20.2■□□□□ 0.82
IFT20-202ENST00000357896 TRIOBPQ9H2D6 2365 aa20.19■□□□□ 0.82
IFT20-202ENST00000357896 DNAAF4Q8WXU2 420 aa20.19■□□□□ 0.82
IFT20-202ENST00000357896 DPF3Q92784 378 aa20.19■□□□□ 0.82
IFT20-202ENST00000357896 CHMP3Q9Y3E7 222 aa20.19■□□□□ 0.82
IFT20-202ENST00000357896 SPDYE5A6NIY4 337 aa20.18■□□□□ 0.82
IFT20-202ENST00000357896 TCP10L2B9ZVM9 353 aa20.18■□□□□ 0.82
IFT20-202ENST00000357896 FLIIQ13045 1269 aa20.18■□□□□ 0.82
IFT20-202ENST00000357896 TWISTNBQ3B726 338 aaPredicted RBP20.18■□□□□ 0.82
IFT20-202ENST00000357896 NKX2-3Q8TAU0 364 aa20.18■□□□□ 0.82
IFT20-202ENST00000357896 TMEM39BQ9GZU3 492 aa20.18■□□□□ 0.82
IFT20-202ENST00000357896 FOXO4P98177 505 aa20.17■□□□□ 0.82
IFT20-202ENST00000357896 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
IFT20-202ENST00000357896 FKBP5Q13451 457 aaPredicted RBP20.17■□□□□ 0.82
IFT20-202ENST00000357896 SNAPC2Q13487 334 aa20.17■□□□□ 0.82
IFT20-202ENST00000357896 LDHAL6AQ6ZMR3 332 aa20.17■□□□□ 0.82
IFT20-202ENST00000357896 ERO1BQ86YB8 467 aa20.17■□□□□ 0.82
IFT20-202ENST00000357896 TSR2Q969E8 191 aaKnown RBP20.17■□□□□ 0.82
IFT20-202ENST00000357896 ARHGAP39Q9C0H5 1083 aa20.17■□□□□ 0.82
IFT20-202ENST00000357896 OTOFQ9HC10 1997 aa20.16■□□□□ 0.82
IFT20-202ENST00000357896 PLIN1O60240 522 aa20.16■□□□□ 0.82
IFT20-202ENST00000357896 CCDC57Q2TAC2 916 aa20.16■□□□□ 0.82
IFT20-202ENST00000357896 TAF7LQ5H9L4 462 aa20.16■□□□□ 0.82
IFT20-202ENST00000357896 CDAN1Q8IWY9 1227 aa20.16■□□□□ 0.82
IFT20-202ENST00000357896 TDRD7Q8NHU6 1098 aaKnown RBP20.16■□□□□ 0.82
IFT20-202ENST00000357896 HOOK2Q96ED9 719 aa20.16■□□□□ 0.82
IFT20-202ENST00000357896 CNNM1Q9NRU3 951 aa20.16■□□□□ 0.82
IFT20-202ENST00000357896 RBM27Q9P2N5 1060 aaKnown RBP20.16■□□□□ 0.82
IFT20-202ENST00000357896 HOXD10P28358 340 aa20.15■□□□□ 0.82
IFT20-202ENST00000357896 HIBADHP31937 336 aaKnown RBP20.15■□□□□ 0.82
IFT20-202ENST00000357896 CRKP46108 304 aa20.15■□□□□ 0.82
IFT20-202ENST00000357896 HTATIP2Q9BUP3 242 aa20.15■□□□□ 0.82
IFT20-202ENST00000357896 RANBP2P49792 3224 aaKnown RBP20.15■□□□□ 0.82
IFT20-202ENST00000357896 BTBD19C9JJ37 291 aa20.14■□□□□ 0.81
IFT20-202ENST00000357896 UBE4AQ14139 1066 aa20.14■□□□□ 0.81
IFT20-202ENST00000357896 HDLBPQ00341 1268 aaKnown RBP20.13■□□□□ 0.81
IFT20-202ENST00000357896 LMBR1LQ6UX01 489 aa20.13■□□□□ 0.81
IFT20-202ENST00000357896 SRRDQ9UH36 339 aa20.13■□□□□ 0.81
IFT20-202ENST00000357896 NR2E3Q9Y5X4 410 aa20.13■□□□□ 0.81
IFT20-202ENST00000357896 SNCAIPQ9Y6H5 919 aa20.13■□□□□ 0.81
IFT20-202ENST00000357896 IRF6O14896 467 aa20.12■□□□□ 0.81
IFT20-202ENST00000357896 PPIL2Q13356 520 aa20.12■□□□□ 0.81
IFT20-202ENST00000357896 MTFR1Q15390 333 aa20.12■□□□□ 0.81
IFT20-202ENST00000357896 C17orf99Q6UX52 265 aa20.12■□□□□ 0.81
IFT20-202ENST00000357896 SLC17A8Q8NDX2 589 aa20.12■□□□□ 0.81
IFT20-202ENST00000357896 RAET1EQ8TD07 263 aa20.12■□□□□ 0.81
IFT20-202ENST00000357896 SHISA4Q96DD7 197 aa20.12■□□□□ 0.81
IFT20-202ENST00000357896 FAM84BQ96KN1 310 aaPredicted RBP20.12■□□□□ 0.81
IFT20-202ENST00000357896 WRNIP1Q96S55 665 aa20.12■□□□□ 0.81
IFT20-202ENST00000357896 DLL1O00548 723 aa20.11■□□□□ 0.81
IFT20-202ENST00000357896 GJB1P08034 283 aa20.11■□□□□ 0.81
IFT20-202ENST00000357896 GRK4P32298 578 aa20.11■□□□□ 0.81
IFT20-202ENST00000357896 PSMC4P43686 418 aa20.11■□□□□ 0.81
IFT20-202ENST00000357896 GYG1P46976 350 aa20.11■□□□□ 0.81
IFT20-202ENST00000357896 GJA8P48165 433 aa20.11■□□□□ 0.81
IFT20-202ENST00000357896 ZNF594Q96JF6 807 aaPredicted RBP20.11■□□□□ 0.81
IFT20-202ENST00000357896 TMOD2Q9NZR1 351 aa20.11■□□□□ 0.81
IFT20-202ENST00000357896 PPATQ06203 517 aa20.1■□□□□ 0.81
IFT20-202ENST00000357896 CCDC27Q2M243 656 aa20.1■□□□□ 0.81
IFT20-202ENST00000357896 DCAF15Q66K64 600 aa20.1■□□□□ 0.81
IFT20-202ENST00000357896 FAM83AQ86UY5 434 aa20.1■□□□□ 0.81
IFT20-202ENST00000357896 VPS37DQ86XT2 251 aa20.1■□□□□ 0.81
IFT20-202ENST00000357896 TBC1D22AQ8WUA7 517 aa20.1■□□□□ 0.81
IFT20-202ENST00000357896 ZKSCAN4Q969J2 545 aaPredicted RBP20.1■□□□□ 0.81
IFT20-202ENST00000357896 TEKT1Q969V4 418 aa20.1■□□□□ 0.81
IFT20-202ENST00000357896 TRIM47Q96LD4 638 aa20.1■□□□□ 0.81
IFT20-202ENST00000357896 FMNL1O95466 1100 aaPredicted RBP20.09■□□□□ 0.81
IFT20-202ENST00000357896 FKBP1CQ5VVH2 108 aa20.09■□□□□ 0.81
IFT20-202ENST00000357896 UBE2Q1Q7Z7E8 422 aa20.09■□□□□ 0.81
IFT20-202ENST00000357896 MRIQ9BWK5 157 aa20.09■□□□□ 0.81
IFT20-202ENST00000357896 PRKRIP1Q9H875 184 aaPredicted RBP20.09■□□□□ 0.81
IFT20-202ENST00000357896 RIPOR2Q9Y4F9 1068 aa20.09■□□□□ 0.81
IFT20-202ENST00000357896 A0A1B0GUL6 1792 aa20.08■□□□□ 0.81
IFT20-202ENST00000357896 ARAP2Q8WZ64 1704 aa20.08■□□□□ 0.81
IFT20-202ENST00000357896 CCL5P13501 91 aa20.08■□□□□ 0.81
IFT20-202ENST00000357896 UBXN2AP68543 259 aa20.08■□□□□ 0.81
IFT20-202ENST00000357896 BEND3Q5T5X7 828 aa20.08■□□□□ 0.81
IFT20-202ENST00000357896 ANKRD23Q86SG2 305 aa20.08■□□□□ 0.81
IFT20-202ENST00000357896 RNF208Q9H0X6 261 aa20.08■□□□□ 0.81
IFT20-202ENST00000357896 PRO3102Q9H379 93 aa20.08■□□□□ 0.81
IFT20-202ENST00000357896 BIN2Q9UBW5 565 aaPredicted RBP20.08■□□□□ 0.81
IFT20-202ENST00000357896 CPA4Q9UI42 421 aa20.08■□□□□ 0.81
IFT20-202ENST00000357896 A0A1W2PPC1 479 aa20.07■□□□□ 0.8
IFT20-202ENST00000357896 GRM8O00222 908 aa20.07■□□□□ 0.8
IFT20-202ENST00000357896 OSBPP22059 807 aa20.07■□□□□ 0.8
IFT20-202ENST00000357896 CACNB3P54284 484 aa20.07■□□□□ 0.8
IFT20-202ENST00000357896 EPHA10Q5JZY3 1008 aa20.07■□□□□ 0.8
IFT20-202ENST00000357896 ZDHHC15Q96MV8 337 aa20.07■□□□□ 0.8
IFT20-202ENST00000357896 IL16Q14005 1332 aa20.06■□□□□ 0.8
IFT20-202ENST00000357896 MYPNQ86TC9 1320 aa20.06■□□□□ 0.8
IFT20-202ENST00000357896 PDHXO00330 501 aa20.06■□□□□ 0.8
IFT20-202ENST00000357896 FRAT2O75474 233 aaPredicted RBP20.06■□□□□ 0.8
IFT20-202ENST00000357896 ECM2O94769 699 aaPredicted RBP20.06■□□□□ 0.8
IFT20-202ENST00000357896 CAPN2P17655 700 aa20.06■□□□□ 0.8
IFT20-202ENST00000357896 WWC1Q8IX03 1113 aa20.06■□□□□ 0.8
IFT20-202ENST00000357896 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.06■□□□□ 0.8
IFT20-202ENST00000357896 ZNF341Q9BYN7 854 aa20.06■□□□□ 0.8
IFT20-202ENST00000357896 MROH5Q6ZUA9 1318 aa20.05■□□□□ 0.8
IFT20-202ENST00000357896 CTGFP29279 349 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms