RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 SNW1Q13573 536 aaKnown RBP12.91□□□□□ -0.34
PSEN1-202ENST00000357710 TLDC1Q6P9B6 456 aa12.91□□□□□ -0.34
PSEN1-202ENST00000357710 OGFOD1Q8N543 542 aa12.91□□□□□ -0.34
PSEN1-202ENST00000357710 LSM14AQ8ND56 463 aaKnown RBP12.91□□□□□ -0.34
PSEN1-202ENST00000357710 HNRNPLLQ8WVV9 542 aaKnown RBP12.91□□□□□ -0.34
PSEN1-202ENST00000357710 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
PSEN1-202ENST00000357710 EBAG9O00559 213 aa12.91□□□□□ -0.34
PSEN1-202ENST00000357710 PYGLP06737 847 aa12.91□□□□□ -0.34
PSEN1-202ENST00000357710 NAT1P18440 290 aa12.91□□□□□ -0.34
PSEN1-202ENST00000357710 HOXC9P31274 260 aa12.91□□□□□ -0.34
PSEN1-202ENST00000357710 LRRC8AQ8IWT6 810 aa12.91□□□□□ -0.34
PSEN1-202ENST00000357710 DNAI1Q9UI46 699 aa12.91□□□□□ -0.34
PSEN1-202ENST00000357710 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
PSEN1-202ENST00000357710 CDR1P51861 262 aa12.9□□□□□ -0.34
PSEN1-202ENST00000357710 CACTINQ8WUQ7 758 aaKnown RBP12.9□□□□□ -0.34
PSEN1-202ENST00000357710 TBC1D5Q92609 795 aa12.9□□□□□ -0.34
PSEN1-202ENST00000357710 ZBTB10Q96DT7 871 aa12.9□□□□□ -0.34
PSEN1-202ENST00000357710 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-202ENST00000357710 SEC31AO94979 1220 aaKnown RBP12.9□□□□□ -0.34
PSEN1-202ENST00000357710 GCP02774 474 aa12.9□□□□□ -0.34
PSEN1-202ENST00000357710 PRKAR2BP31323 418 aa12.9□□□□□ -0.34
PSEN1-202ENST00000357710 GNAI1P63096 354 aa12.9□□□□□ -0.34
PSEN1-202ENST00000357710 MFSD4BQ5TF39 518 aa12.9□□□□□ -0.34
PSEN1-202ENST00000357710 B4GALNT2Q8NHY0 566 aa12.9□□□□□ -0.34
PSEN1-202ENST00000357710 USP26Q9BXU7 913 aa12.9□□□□□ -0.34
PSEN1-202ENST00000357710 FAM169AQ9Y6X4 670 aa12.9□□□□□ -0.34
PSEN1-202ENST00000357710 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-202ENST00000357710 ROBO1Q9Y6N7 1651 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 GOLGA6L10A6NI86 522 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 POTEB2H3BUK9 544 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 CAVIN2O95810 425 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 HMOX1P09601 288 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 MVPQ14764 893 aaKnown RBP12.89□□□□□ -0.35
PSEN1-202ENST00000357710 SLMAPQ14BN4 828 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 LRRFIP1Q32MZ4 808 aaKnown RBP12.89□□□□□ -0.35
PSEN1-202ENST00000357710 MICALCLQ6ZW33 695 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 HDXQ7Z353 690 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-202ENST00000357710 INTS4Q96HW7 963 aaKnown RBP12.89□□□□□ -0.35
PSEN1-202ENST00000357710 RSRC1Q96IZ7 334 aaKnown RBP12.89□□□□□ -0.35
PSEN1-202ENST00000357710 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
PSEN1-202ENST00000357710 ABCF2Q9UG63 623 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 MYL1P05976 194 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 GCLCP48506 637 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-202ENST00000357710 SF3B2Q13435 895 aaKnown RBP12.89□□□□□ -0.35
PSEN1-202ENST00000357710 TAX1BP1Q86VP1 789 aa12.89□□□□□ -0.35
PSEN1-202ENST00000357710 ABCC6O95255 1503 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 LIN7AO14910 233 aaPredicted RBP12.88□□□□□ -0.35
PSEN1-202ENST00000357710 NPHP1O15259 732 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 NUCB1Q02818 461 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 CWF19L1Q69YN2 538 aaKnown RBP12.88□□□□□ -0.35
PSEN1-202ENST00000357710 CCDC170Q8IYT3 715 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 SMAPO00193 183 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 CDC45O75419 566 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 ERLIN1O75477 346 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
PSEN1-202ENST00000357710 SLC8A1P32418 973 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 TUBB4BP68371 445 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 MAP3K9P80192 1104 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 NEXNQ0ZGT2 675 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 ARHGAP22Q7Z5H3 698 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 ZFAND2BQ8WV99 257 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 IP6K1Q92551 441 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 RABGGTAQ92696 567 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 HOOK2Q96ED9 719 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
PSEN1-202ENST00000357710 INCENPQ9NQS7 918 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 FRMD4BQ9Y2L6 1034 aa12.88□□□□□ -0.35
PSEN1-202ENST00000357710 RRP7AQ9Y3A4 280 aaKnown RBP12.88□□□□□ -0.35
PSEN1-202ENST00000357710 NAA25Q14CX7 972 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 KLHL10Q6JEL2 608 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 USP48Q86UV5 1035 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 CNNM3Q8NE01 707 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 CXorf38Q8TB03 319 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 MTA3Q9BTC8 594 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 AHDC1Q5TGY3 1603 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-202ENST00000357710 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
PSEN1-202ENST00000357710 ARHGAP25P42331 645 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 FNTAP49354 379 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 GSDMDP57764 484 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 ROR2Q01974 943 aaKnown RBP12.87□□□□□ -0.35
PSEN1-202ENST00000357710 RRP12Q5JTH9 1297 aaKnown RBP12.87□□□□□ -0.35
PSEN1-202ENST00000357710 ARHGEF25Q86VW2 580 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 APLFQ8IW19 511 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-202ENST00000357710 NME8Q8N427 588 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 SMCR8Q8TEV9 937 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-202ENST00000357710 SPDL1Q96EA4 605 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 IGSF1Q8N6C5 1336 aa12.87□□□□□ -0.35
PSEN1-202ENST00000357710 IPO5O00410 1097 aaKnown RBP12.86□□□□□ -0.35
PSEN1-202ENST00000357710 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
PSEN1-202ENST00000357710 LONRF2Q1L5Z9 754 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 CEP85LQ5SZL2 805 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 SLC30A9Q6PML9 568 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 TBC1D9Q6ZT07 1266 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 TTLL7Q6ZT98 887 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 KCNV2Q8TDN2 545 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 TEKT1Q969V4 418 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 ALS2CR12Q96Q35 445 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms