RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 CWC15Q9P013 229 aaKnown RBP12.34□□□□□ -0.43
CAPN3-205ENST00000357568 DBF4Q9UBU7 674 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-205ENST00000357568 ERICH4A6NGS2 130 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 TMEM132AQ24JP5 1023 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 GPR161Q8N6U8 529 aaKnown RBP12.34□□□□□ -0.43
CAPN3-205ENST00000357568 SMARCC1Q92922 1105 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-205ENST00000357568 KIAA1468Q9P260 1216 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 FEZ2Q9UHY8 353 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-205ENST00000357568 LY75O60449 1722 aa12.33□□□□□ -0.43
CAPN3-205ENST00000357568 ZSCAN12O43309 604 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 SASH1O94885 1247 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 YEATS4O95619 227 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 CHRM1P11229 460 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-205ENST00000357568 NLRP12P59046 1061 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 FAM182BQ5T319 152 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 KSR2Q6VAB6 950 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 MNS1Q8NEH6 495 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 EAF2Q96CJ1 260 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-205ENST00000357568 ACSBG1Q96GR2 724 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 CHPF2Q9P2E5 772 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 ATP5JP18859 108 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 TUBB4BP68371 445 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 SCRN1Q12765 414 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 Q6ZUG5 572 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 KCNG4Q8TDN1 519 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 PIGBQ92521 554 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 USP28Q96RU2 1077 aa12.33□□□□□ -0.44
CAPN3-205ENST00000357568 XPO4Q9C0E2 1151 aaKnown RBP12.33□□□□□ -0.44
CAPN3-205ENST00000357568 C9orf78Q9NZ63 289 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-205ENST00000357568 HEG1Q9ULI3 1381 aa12.32□□□□□ -0.44
CAPN3-205ENST00000357568 HMGB2P26583 209 aaKnown RBP12.32□□□□□ -0.44
CAPN3-205ENST00000357568 RAD51AP2Q09MP3 1159 aa12.32□□□□□ -0.44
CAPN3-205ENST00000357568 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
CAPN3-205ENST00000357568 CTR9Q6PD62 1173 aa12.32□□□□□ -0.44
CAPN3-205ENST00000357568 TRIM65Q6PJ69 517 aa12.32□□□□□ -0.44
CAPN3-205ENST00000357568 TMC6Q7Z403 805 aa12.32□□□□□ -0.44
CAPN3-205ENST00000357568 NFATC2IPQ8NCF5 419 aa12.32□□□□□ -0.44
CAPN3-205ENST00000357568 LINS1Q8NG48 757 aa12.32□□□□□ -0.44
CAPN3-205ENST00000357568 EXOC4Q96A65 974 aa12.32□□□□□ -0.44
CAPN3-205ENST00000357568 ST7Q9NRC1 585 aa12.32□□□□□ -0.44
CAPN3-205ENST00000357568 COL15A1P39059 1388 aa12.32□□□□□ -0.44
CAPN3-205ENST00000357568 STK3Q13188 491 aa12.32□□□□□ -0.44
CAPN3-205ENST00000357568 DHX32Q7L7V1 743 aaKnown RBP12.31□□□□□ -0.44
CAPN3-205ENST00000357568 ZNF274Q96GC6 653 aaPredicted RBP12.31□□□□□ -0.44
CAPN3-205ENST00000357568 AK7Q96M32 723 aa12.31□□□□□ -0.44
CAPN3-205ENST00000357568 IFNKQ9P0W0 207 aa12.31□□□□□ -0.44
CAPN3-205ENST00000357568 SH3TC1Q8TE82 1336 aa12.31□□□□□ -0.44
CAPN3-205ENST00000357568 KCNQ2O43526 872 aa12.31□□□□□ -0.44
CAPN3-205ENST00000357568 TRIM37O94972 964 aa12.31□□□□□ -0.44
CAPN3-205ENST00000357568 HSP90B1P14625 803 aaKnown RBP12.31□□□□□ -0.44
CAPN3-205ENST00000357568 NCAPHQ15003 741 aa12.31□□□□□ -0.44
CAPN3-205ENST00000357568 ZNF589Q86UQ0 364 aaPredicted RBP12.31□□□□□ -0.44
CAPN3-205ENST00000357568 GOLGA5Q8TBA6 731 aa12.31□□□□□ -0.44
CAPN3-205ENST00000357568 POLR3EQ9NVU0 708 aa12.31□□□□□ -0.44
CAPN3-205ENST00000357568 PTPDC1A2A3K4 754 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 GRM8O00222 908 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 PLSCR1O15162 318 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 SMC2O95347 1197 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 ME1P48163 572 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 COL9A3Q14050 684 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-205ENST00000357568 CC2D1AQ6P1N0 951 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-205ENST00000357568 ILDR2Q71H61 639 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 HOMER1Q86YM7 354 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 RABGGTAQ92696 567 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-205ENST00000357568 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 TAF6LQ9Y6J9 622 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 NEDD4P46934 1319 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 KCPQ6ZWJ8 1503 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 ARHGAP6O43182 974 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 TBC1D8O95759 1140 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 EVCP57679 992 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 TCEANC2Q96MN5 208 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 SDF4Q9BRK5 362 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 PCDHA7Q9UN72 937 aa12.3□□□□□ -0.44
CAPN3-205ENST00000357568 CTDNEP1O95476 244 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 EXOSC10Q01780 885 aaKnown RBP12.29□□□□□ -0.44
CAPN3-205ENST00000357568 SF3B2Q13435 895 aaKnown RBP12.29□□□□□ -0.44
CAPN3-205ENST00000357568 RSRC2Q7L4I2 434 aaKnown RBP12.29□□□□□ -0.44
CAPN3-205ENST00000357568 BRAPQ7Z569 592 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 REXO1L1PQ8IX06 675 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 LAMA4Q16363 1823 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 RPS6KA5O75582 802 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 MAP3K9P80192 1104 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 FANCCQ00597 558 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 TUBB2AQ13885 445 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 BRD3Q15059 726 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 MCMDC2Q4G0Z9 681 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 LINC00301Q8NCQ3 95 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 LRRN4CLQ8ND94 238 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 TUBB2BQ9BVA1 445 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 DSCC1Q9BVC3 393 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 PA2G4Q9UQ80 394 aaKnown RBP12.29□□□□□ -0.44
CAPN3-205ENST00000357568 MAP3K2Q9Y2U5 619 aa12.29□□□□□ -0.44
CAPN3-205ENST00000357568 RREB1Q92766 1687 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 DDX58O95786 925 aaKnown RBP12.28□□□□□ -0.44
CAPN3-205ENST00000357568 SLC3A2P08195 630 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms