RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SPTLC2O15270 562 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 SRLQ86TD4 932 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 FMR1NBQ8N0W7 255 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 RRP15Q9Y3B9 282 aaKnown RBP9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 FHOD1Q9Y613 1164 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 CACNA1FO60840 1977 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 CARMIL3Q8ND23 1372 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 ZNF202O95125 648 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 PNMA6AP0CW24 399 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 ADALQ6DHV7 355 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 PDILTQ8N807 584 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 UBXN4Q92575 508 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 SART3Q15020 963 aaKnown RBP9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 CCDC91Q7Z6B0 441 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 ANKLE2Q86XL3 938 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 UTP14AQ9BVJ6 771 aaKnown RBP9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 EPC1Q9H2F5 836 aa9.5□□□□□ -0.89
CDC42SE1-201ENST00000357235 FDPSP14324 419 aaKnown RBP9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 ATP2B1P20020 1258 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 PLA2G4AP47712 749 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 SATB1Q01826 763 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 RALYLQ86SE5 291 aaKnown RBP9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 LINC00301Q8NCQ3 95 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 AIFM3Q96NN9 605 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 ATG3Q9NT62 314 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 DONSONQ9NYP3 566 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 LRRC37A3O60309 1634 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 UBASH3AP57075 661 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 ST5P78524 1137 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 LRRC24Q50LG9 513 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 CEP120Q8N960 986 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 SMARCE1Q969G3 411 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 UTYO14607 1347 aa9.49□□□□□ -0.89
CDC42SE1-201ENST00000357235 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 TOPAZ1Q8N9V7 1692 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 RFX5P48382 616 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 FANCCQ00597 558 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 EGFL6Q8IUX8 553 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 ZBTB3Q9H5J0 574 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 CXorf56Q9H5V9 222 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 MAST3O60307 1309 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 M0R2C6 588 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 KIF2AO00139 706 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 PRC1O43663 620 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 H2AFXP16104 143 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 PFKFB1P16118 471 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 CLCN6P51797 869 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 SPECC1Q5M775 1068 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 CCDC150Q8NCX0 1101 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 FBXO18Q8NFZ0 1043 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 GOLGA5Q8TBA6 731 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 KCNG4Q8TDN1 519 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 AK7Q96M32 723 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 SEC31AO94979 1220 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 TDO2P48775 406 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 EXOSC10Q01780 885 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 MYSM1Q5VVJ2 828 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 TMCO3Q6UWJ1 677 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 ARHGEF25Q86VW2 580 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 CARD6Q9BX69 1037 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 ZSWIM4Q9H7M6 989 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 SLC52A2Q9HAB3 445 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 RTEL1Q9NZ71 1219 aa9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDC42SE1-201ENST00000357235 KIF1CO43896 1103 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 SYKP43405 635 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 PNOCQ13519 176 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 E2F4Q16254 413 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 IMMTQ16891 758 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 DPF2Q92785 391 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 OSBP2Q969R2 916 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 PUS3Q9BZE2 481 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 OSBPL5Q9H0X9 879 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 ARGLU1Q9NWB6 273 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 IMPACTQ9P2X3 320 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 KIF28PB7ZC32 967 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 RNF113AO15541 343 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 SNRPA1P09661 255 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 MAGEA9P43362 315 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 PI16Q6UXB8 463 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 PACS2Q86VP3 889 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 MICU3Q86XE3 530 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 CNKSR2Q8WXI2 1034 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 ZNF274Q96GC6 653 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 CCDC34Q96HJ3 373 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 CLIC6Q96NY7 704 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 DSCC1Q9BVC3 393 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 HELLSQ9NRZ9 838 aa9.47□□□□□ -0.89
CDC42SE1-201ENST00000357235 TOP1P11387 765 aaKnown RBP9.46□□□□□ -0.89
CDC42SE1-201ENST00000357235 GRIPAP1Q4V328 841 aa9.46□□□□□ -0.89
CDC42SE1-201ENST00000357235 TTC39AQ5SRH9 613 aa9.46□□□□□ -0.89
CDC42SE1-201ENST00000357235 ZMYM1Q5SVZ6 1142 aa9.46□□□□□ -0.89
CDC42SE1-201ENST00000357235 ANO1Q5XXA6 986 aa9.46□□□□□ -0.89
CDC42SE1-201ENST00000357235 CCDC82Q8N4S0 544 aa9.46□□□□□ -0.89
CDC42SE1-201ENST00000357235 PHKBQ93100 1093 aa9.46□□□□□ -0.89
CDC42SE1-201ENST00000357235 TMEM232C9JQI7 657 aa9.46□□□□□ -0.9
CDC42SE1-201ENST00000357235 WDHD1O75717 1129 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-201ENST00000357235 ERBB3P21860 1342 aa9.46□□□□□ -0.9
CDC42SE1-201ENST00000357235 NLRP12P59046 1061 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms