RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 NRBP1Q9UHY1 535 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 EXOC6BQ9Y2D4 811 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 CAPN7Q9Y6W3 813 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 SYKP43405 635 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 CCDC57Q2TAC2 916 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 YTHDC2Q9H6S0 1430 aaKnown RBP7.44□□□□□ -1.22
TRIM38-201ENST00000357085 PNPLA6Q8IY17 1366 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 NAP1L3Q99457 506 aaPredicted RBP7.44□□□□□ -1.22
TRIM38-201ENST00000357085 FMN2Q9NZ56 1722 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 SRRM3A6NNA2 597 aaPredicted RBP7.44□□□□□ -1.22
TRIM38-201ENST00000357085 JPH2Q9BR39 696 aaPredicted RBP7.44□□□□□ -1.22
TRIM38-201ENST00000357085 SLC12A5Q9H2X9 1139 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 TBC1D2BQ9UPU7 963 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 FLOT1O75955 427 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 LONRF2Q1L5Z9 754 aa7.44□□□□□ -1.22
TRIM38-201ENST00000357085 NDUFAB1O14561 156 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 VAMP4O75379 141 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 CHAMP1Q96JM3 812 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 MAGEF1Q9HAY2 307 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 POLR3EQ9NVU0 708 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 HMOX1P09601 288 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 ODF2Q5BJF6 829 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 ELOA2Q8IYF1 753 aaPredicted RBP7.43□□□□□ -1.22
TRIM38-201ENST00000357085 NUCKS1Q9H1E3 243 aaKnown RBP7.43□□□□□ -1.22
TRIM38-201ENST00000357085 AKR1B15C9JRZ8 316 aaPredicted RBP7.43□□□□□ -1.22
TRIM38-201ENST00000357085 HDGFL1Q5TGJ6 251 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 SPATA24Q86W54 205 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 AMOTL1Q8IY63 956 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 N4BP2L2Q92802 583 aaPredicted RBP7.43□□□□□ -1.22
TRIM38-201ENST00000357085 FAM204AQ9H8W3 233 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 BICDL2A1A5D9 508 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 TACC1O75410 805 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 RHOXF2BP0C7M4 288 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 CCDC129Q6ZRS4 1044 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 NUP88Q99567 741 aaPredicted RBP7.43□□□□□ -1.22
TRIM38-201ENST00000357085 RHOXF2Q9BQY4 288 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 PLCB1Q9NQ66 1216 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 SPTLC2O15270 562 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 TNNC1P63316 161 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 EMBQ6PCB8 327 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 NCAPD2Q15021 1401 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 WDR19Q8NEZ3 1342 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 SNCBQ16143 134 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 IFT20Q8IY31 132 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 FBF1Q8TES7 1133 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 ODF2LQ9ULJ1 636 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 FHOD1Q9Y613 1164 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 PLEKHG2Q9H7P9 1386 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 ERCC5P28715 1186 aaPredicted RBP7.43□□□□□ -1.22
TRIM38-201ENST00000357085 PANX2Q96RD6 677 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 MLH3Q9UHC1 1453 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 ATP10DQ9P241 1426 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 NFXL1Q6ZNB6 911 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 NUP133Q8WUM0 1156 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 GGNBP2Q9H3C7 697 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 SAMD15Q9P1V8 674 aa7.43□□□□□ -1.22
TRIM38-201ENST00000357085 RPS6KA5O75582 802 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 ITIH3Q06033 890 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 TTF1Q15361 905 aaPredicted RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 LMNTD2Q8IXW0 634 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 SEMA3EO15041 775 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 HOOK3Q86VS8 718 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 GNL3LQ9NVN8 582 aaKnown RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 CORO7P57737 925 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 NLRP12P59046 1061 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 SH3GL3Q99963 347 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 RNF41Q9H4P4 317 aaPredicted RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 BATF3Q9NR55 127 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 TFIP11Q9UBB9 837 aaKnown RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 SPEF2Q9C093 1822 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 MAP4K4O95819 1239 aaPredicted RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 CCDC40Q4G0X9 1142 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 NYAP1Q6ZVC0 841 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 MINK1Q8N4C8 1332 aaPredicted RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 POGZQ7Z3K3 1410 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 NRKQ7Z2Y5 1582 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 PPP1R12AO14974 1030 aaPredicted RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 EVI5O60447 810 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 KIF5BP33176 963 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 LACTBP83111 547 aaPredicted RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 GLE1Q53GS7 698 aaKnown RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 LMBR1Q8WVP7 490 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 TRIM6Q9C030 488 aaPredicted RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 VCXQ9H320 206 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 AKAP2Q9Y2D5 859 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 GNAT3A8MTJ3 354 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 H2AFXP16104 143 aaPredicted RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 PAK2Q13177 524 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 BIRC2Q13490 618 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 NAA30Q147X3 362 aaPredicted RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 RBM43Q6ZSC3 357 aaKnown RBP7.42□□□□□ -1.22
TRIM38-201ENST00000357085 TSPOAP1O95153 1857 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 MYL1P05976 194 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 ADALQ6DHV7 355 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 NUP58Q9BVL2 599 aa7.42□□□□□ -1.22
TRIM38-201ENST00000357085 RCSD1Q6JBY9 416 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 TTC5Q8N0Z6 440 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 PCMTD1Q96MG8 357 aaPredicted RBP7.41□□□□□ -1.22
TRIM38-201ENST00000357085 EID1Q9Y6B2 187 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 EPS15P42566 896 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms