RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 CCDC34Q96HJ3 373 aa15.42■□□□□ 0.06
NCDN-201ENST00000356090 MORC2Q9Y6X9 1032 aaPredicted RBP15.42■□□□□ 0.06
NCDN-201ENST00000356090 SEC31AO94979 1220 aaKnown RBP15.42■□□□□ 0.06
NCDN-201ENST00000356090 METAP2P50579 478 aaKnown RBP eCLIP15.42■□□□□ 0.06
NCDN-201ENST00000356090 LRRFIP1Q32MZ4 808 aaKnown RBP15.42■□□□□ 0.06
NCDN-201ENST00000356090 PROSER2Q86WR7 435 aaPredicted RBP15.42■□□□□ 0.06
NCDN-201ENST00000356090 SH3TC1Q8TE82 1336 aa15.41■□□□□ 0.06
NCDN-201ENST00000356090 KLHL10Q6JEL2 608 aa15.41■□□□□ 0.06
NCDN-201ENST00000356090 PLBD2Q8NHP8 589 aa15.41■□□□□ 0.06
NCDN-201ENST00000356090 SLFN14P0C7P3 912 aa15.41■□□□□ 0.06
NCDN-201ENST00000356090 CLCN6P51797 869 aa15.41■□□□□ 0.06
NCDN-201ENST00000356090 KARSQ15046 597 aaKnown RBP15.41■□□□□ 0.06
NCDN-201ENST00000356090 ZNF827Q17R98 1081 aa15.41■□□□□ 0.06
NCDN-201ENST00000356090 ATL3Q6DD88 541 aa15.41■□□□□ 0.06
NCDN-201ENST00000356090 TMEM232C9JQI7 657 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 TRMT44Q8IYL2 757 aaKnown RBP15.4■□□□□ 0.06
NCDN-201ENST00000356090 FAM89AQ96GI7 184 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 FANCLQ9NW38 375 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 IMPACTQ9P2X3 320 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 GPTP24298 496 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 VPS37DQ86XT2 251 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 JMYQ8N9B5 988 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 PUS7LQ9H0K6 701 aaKnown RBP15.4■□□□□ 0.06
NCDN-201ENST00000356090 UBR1Q8IWV7 1749 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 ANKARQ7Z5J8 1434 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 GPAA1O43292 621 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 WDHD1O75717 1129 aaPredicted RBP15.4■□□□□ 0.06
NCDN-201ENST00000356090 ATG9AQ7Z3C6 839 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 XAGE2Q96GT9 111 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 ZFP91Q96JP5 570 aaPredicted RBP15.4■□□□□ 0.06
NCDN-201ENST00000356090 SLC26A6Q9BXS9 759 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 TOPAZ1Q8N9V7 1692 aa15.4■□□□□ 0.06
NCDN-201ENST00000356090 B4E1Z4 1266 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 ADKP55263 362 aaKnown RBP15.39■□□□□ 0.05
NCDN-201ENST00000356090 ETF1P62495 437 aaKnown RBP15.39■□□□□ 0.05
NCDN-201ENST00000356090 MYL5Q02045 173 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 METTL24Q5JXM2 366 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 ERBB3P21860 1342 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 ADGRL3Q9HAR2 1447 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 CBFA2T2O43439 604 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 YEATS4O95619 227 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 SCARF1Q14162 830 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 DESI2Q9BSY9 194 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 EVCP57679 992 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 SLC9C2Q5TAH2 1124 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 BRAPQ7Z569 592 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 BBXQ8WY36 941 aaPredicted RBP15.39■□□□□ 0.05
NCDN-201ENST00000356090 INCENPQ9NQS7 918 aa15.39■□□□□ 0.05
NCDN-201ENST00000356090 LRRC37A3O60309 1634 aa15.38■□□□□ 0.05
NCDN-201ENST00000356090 A0A1W2PQ27 194 aa15.38■□□□□ 0.05
NCDN-201ENST00000356090 A0A1W2PQ64 194 aa15.38■□□□□ 0.05
NCDN-201ENST00000356090 A0A1W2PQD8 194 aa15.38■□□□□ 0.05
NCDN-201ENST00000356090 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
NCDN-201ENST00000356090 KRT40Q6A162 431 aa15.38■□□□□ 0.05
NCDN-201ENST00000356090 OSBPL5Q9H0X9 879 aaPredicted RBP15.38■□□□□ 0.05
NCDN-201ENST00000356090 CNNM1Q9NRU3 951 aa15.38■□□□□ 0.05
NCDN-201ENST00000356090 UBE2Q2LH0YL09 131 aa15.38■□□□□ 0.05
NCDN-201ENST00000356090 IARSP41252 1262 aaKnown RBP15.38■□□□□ 0.05
NCDN-201ENST00000356090 KIF23Q02241 960 aaPredicted RBP15.38■□□□□ 0.05
NCDN-201ENST00000356090 CCDC102BQ68D86 513 aa15.38■□□□□ 0.05
NCDN-201ENST00000356090 MROH7-TTC4A0A0A0MT08 1334 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 GOLGA8AA7E2F4 631 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 CASQ1P31415 396 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 RABL6Q3YEC7 729 aaPredicted RBP15.37■□□□□ 0.05
NCDN-201ENST00000356090 CMTR1Q8N1G2 835 aaKnown RBP15.37■□□□□ 0.05
NCDN-201ENST00000356090 NUP133Q8WUM0 1156 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 ZKSCAN3Q9BRR0 538 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 KAT6BQ8WYB5 2073 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 FOXN1O15353 648 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 CYP27B1O15528 508 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 FOXO4P98177 505 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 POLR3EQ9NVU0 708 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 ZNF446Q9NWS9 450 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 DCAF5Q96JK2 942 aa15.37■□□□□ 0.05
NCDN-201ENST00000356090 CCP110O43303 1012 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 HELBQ8NG08 1087 aaPredicted RBP15.36■□□□□ 0.05
NCDN-201ENST00000356090 LZTFL1Q9NQ48 299 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 PCDHA5Q9Y5H7 936 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 CMA1P23946 247 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 STX17P56962 302 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 TMEM67Q5HYA8 995 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 LDHAL6AQ6ZMR3 332 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 GRAMD1CQ8IYS0 662 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 NEK11Q8NG66 645 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 ZCCHC17Q9NP64 241 aaKnown RBP15.36■□□□□ 0.05
NCDN-201ENST00000356090 NBPF26B4DH59 902 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 ZSCAN12O43309 604 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
NCDN-201ENST00000356090 SAFBQ15424 915 aaKnown RBP eCLIP15.36■□□□□ 0.05
NCDN-201ENST00000356090 NBPF14Q5TI25 921 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 NBPF10Q6P3W6 841 aaKnown RBP15.36■□□□□ 0.05
NCDN-201ENST00000356090 NBPF15Q8N660 670 aa15.36■□□□□ 0.05
NCDN-201ENST00000356090 CCDC12Q8WUD4 166 aaPredicted RBP15.36■□□□□ 0.05
NCDN-201ENST00000356090 PSDA5PKW4 1024 aaPredicted RBP15.35■□□□□ 0.05
NCDN-201ENST00000356090 IFIT3O14879 490 aaKnown RBP15.35■□□□□ 0.05
NCDN-201ENST00000356090 PNMA6AP0CW24 399 aaPredicted RBP15.35■□□□□ 0.05
NCDN-201ENST00000356090 LONRF3Q496Y0 759 aa15.35■□□□□ 0.05
NCDN-201ENST00000356090 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.35■□□□□ 0.05
NCDN-201ENST00000356090 SENP2Q9HC62 589 aa15.35■□□□□ 0.05
NCDN-201ENST00000356090 KCNH3Q9ULD8 1083 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms