RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 JAKMIP1Q96N16 626 aaKnown RBP16.27■□□□□ 0.2
HOXA1-202ENST00000355633 STRBPQ96SI9 672 aaKnown RBP16.27■□□□□ 0.2
HOXA1-202ENST00000355633 TM6SF1Q9BZW5 370 aa16.27■□□□□ 0.2
HOXA1-202ENST00000355633 CYP21A2P08686 494 aa16.26■□□□□ 0.19
HOXA1-202ENST00000355633 MECOMQ03112 1051 aa16.26■□□□□ 0.19
HOXA1-202ENST00000355633 ARMT1Q9H993 441 aa16.26■□□□□ 0.19
HOXA1-202ENST00000355633 CTNNA3Q9UI47 895 aa16.26■□□□□ 0.19
HOXA1-202ENST00000355633 C21orf2O43822 256 aa16.26■□□□□ 0.19
HOXA1-202ENST00000355633 LDHBP07195 334 aaKnown RBP16.26■□□□□ 0.19
HOXA1-202ENST00000355633 CASTP20810 708 aaKnown RBP16.26■□□□□ 0.19
HOXA1-202ENST00000355633 PSMA5P28066 241 aa16.26■□□□□ 0.19
HOXA1-202ENST00000355633 KRT32Q14532 448 aa16.26■□□□□ 0.19
HOXA1-202ENST00000355633 TMED8Q6PL24 325 aaPredicted RBP16.26■□□□□ 0.19
HOXA1-202ENST00000355633 ADGRA1Q86SQ6 560 aa16.26■□□□□ 0.19
HOXA1-202ENST00000355633 DZIP1Q86YF9 867 aaKnown RBP16.26■□□□□ 0.19
HOXA1-202ENST00000355633 MIGA1Q8NAN2 632 aa16.26■□□□□ 0.19
HOXA1-202ENST00000355633 RTFDC1Q9BY42 306 aaPredicted RBP16.26■□□□□ 0.19
HOXA1-202ENST00000355633 KIAA1551Q9HCM1 1747 aa16.26■□□□□ 0.19
HOXA1-202ENST00000355633 SNED1Q8TER0 1413 aa16.25■□□□□ 0.19
HOXA1-202ENST00000355633 G3V3G9 751 aa16.25■□□□□ 0.19
HOXA1-202ENST00000355633 GNAT2P19087 354 aa16.25■□□□□ 0.19
HOXA1-202ENST00000355633 DCAF8Q5TAQ9 597 aa16.25■□□□□ 0.19
HOXA1-202ENST00000355633 ZNF384Q8TF68 577 aa16.25■□□□□ 0.19
HOXA1-202ENST00000355633 SGIP1Q9BQI5 828 aa16.25■□□□□ 0.19
HOXA1-202ENST00000355633 TAF6LQ9Y6J9 622 aa16.25■□□□□ 0.19
HOXA1-202ENST00000355633 RPAP1Q9BWH6 1393 aaPredicted RBP16.25■□□□□ 0.19
HOXA1-202ENST00000355633 MAGEB6P1A0A0J9YX57 407 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 FGAP02671 866 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 APPP05067 770 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 MCM2P49736 904 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 GRIPAP1Q4V328 841 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 LCORLQ8N3X6 602 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 TBC1D22AQ8WUA7 517 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 ZSWIM6Q9HCJ5 1215 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 FAM205AQ6ZU69 1335 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 CHD4Q14839 1912 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 PATL2C9JE40 543 aaKnown RBP16.24■□□□□ 0.19
HOXA1-202ENST00000355633 DOK7Q18PE1 504 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 CCDC93Q567U6 631 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 TTLL5Q6EMB2 1281 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 SUPT20HQ8NEM7 779 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 CYP46A1Q9Y6A2 500 aa16.24■□□□□ 0.19
HOXA1-202ENST00000355633 GTF2IP78347 998 aa16.23■□□□□ 0.19
HOXA1-202ENST00000355633 IMMTQ16891 758 aaKnown RBP16.23■□□□□ 0.19
HOXA1-202ENST00000355633 RUFY3Q7L099 469 aa16.23■□□□□ 0.19
HOXA1-202ENST00000355633 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
HOXA1-202ENST00000355633 CPA1P15085 419 aa16.23■□□□□ 0.19
HOXA1-202ENST00000355633 MFSD14BQ5SR56 506 aa16.23■□□□□ 0.19
HOXA1-202ENST00000355633 BLOC1S2Q6QNY1 142 aa16.23■□□□□ 0.19
HOXA1-202ENST00000355633 TTC14Q96N46 770 aa16.23■□□□□ 0.19
HOXA1-202ENST00000355633 RIOK1Q9BRS2 568 aaKnown RBP16.23■□□□□ 0.19
HOXA1-202ENST00000355633 PPP1R1BQ9UD71 204 aaPredicted RBP16.23■□□□□ 0.19
HOXA1-202ENST00000355633 SLC4A4Q9Y6R1 1079 aa16.23■□□□□ 0.19
HOXA1-202ENST00000355633 GSTO1P78417 241 aa16.22■□□□□ 0.19
HOXA1-202ENST00000355633 GRIK5Q16478 980 aa16.22■□□□□ 0.19
HOXA1-202ENST00000355633 PODNQ7Z5L7 613 aa16.22■□□□□ 0.19
HOXA1-202ENST00000355633 RTKN2Q8IZC4 609 aa16.22■□□□□ 0.19
HOXA1-202ENST00000355633 NEK1Q96PY6 1258 aa16.22■□□□□ 0.19
HOXA1-202ENST00000355633 ZMYM6O95789 1325 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 ZNF213O14771 459 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 PTGER2P43116 358 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 ALX1Q15699 326 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 IFNL3Q8IZI9 196 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 SPRYD3Q8NCJ5 442 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 FBXW7Q969H0 707 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 NACAP1Q9BZK3 213 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 NAPBQ9H115 298 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 DBNDD1Q9H9R9 158 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 EPB41L4AQ9HCS5 686 aaPredicted RBP16.21■□□□□ 0.19
HOXA1-202ENST00000355633 PDRG1Q9NUG6 133 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 CD2APQ9Y5K6 639 aa16.21■□□□□ 0.19
HOXA1-202ENST00000355633 GSG1L2A8MUP6 293 aa16.21■□□□□ 0.18
HOXA1-202ENST00000355633 PRKAB2O43741 272 aa16.21■□□□□ 0.18
HOXA1-202ENST00000355633 HAND2P61296 217 aa16.21■□□□□ 0.18
HOXA1-202ENST00000355633 DYNLL1P63167 89 aaKnown RBP16.21■□□□□ 0.18
HOXA1-202ENST00000355633 BRCA1P38398 1863 aaKnown RBP16.21■□□□□ 0.18
HOXA1-202ENST00000355633 LAMA4Q16363 1823 aa16.2■□□□□ 0.18
HOXA1-202ENST00000355633 E7EWF7 191 aa16.2■□□□□ 0.18
HOXA1-202ENST00000355633 LDHCP07864 332 aa16.2■□□□□ 0.18
HOXA1-202ENST00000355633 HSP90AA1P07900 732 aaKnown RBP16.2■□□□□ 0.18
HOXA1-202ENST00000355633 RPS6KB1P23443 525 aa16.2■□□□□ 0.18
HOXA1-202ENST00000355633 KIAA2012Q0VF49 1180 aa16.2■□□□□ 0.18
HOXA1-202ENST00000355633 AOC3Q16853 763 aa16.2■□□□□ 0.18
HOXA1-202ENST00000355633 SOGA3Q5TF21 947 aa16.2■□□□□ 0.18
HOXA1-202ENST00000355633 STOX1Q6ZVD7 989 aa16.2■□□□□ 0.18
HOXA1-202ENST00000355633 AATFQ9NY61 560 aaKnown RBP eCLIP16.2■□□□□ 0.18
HOXA1-202ENST00000355633 ECE2O60344 883 aa16.19■□□□□ 0.18
HOXA1-202ENST00000355633 AK2P54819 239 aa16.19■□□□□ 0.18
HOXA1-202ENST00000355633 NOL8Q76FK4 1167 aaKnown RBP16.19■□□□□ 0.18
HOXA1-202ENST00000355633 PSMD1Q99460 953 aa16.19■□□□□ 0.18
HOXA1-202ENST00000355633 MYH2Q9UKX2 1941 aa16.19■□□□□ 0.18
HOXA1-202ENST00000355633 PPIP5K2O43314 1243 aa16.19■□□□□ 0.18
HOXA1-202ENST00000355633 HMGB1P09429 215 aaKnown RBP16.19■□□□□ 0.18
HOXA1-202ENST00000355633 TDO2P48775 406 aa16.19■□□□□ 0.18
HOXA1-202ENST00000355633 DIXDC1Q155Q3 683 aa16.19■□□□□ 0.18
HOXA1-202ENST00000355633 DALRD3Q5D0E6 543 aaKnown RBP16.19■□□□□ 0.18
HOXA1-202ENST00000355633 SDR42E1Q8WUS8 393 aa16.19■□□□□ 0.18
HOXA1-202ENST00000355633 SLKQ9H2G2 1235 aaPredicted RBP16.19■□□□□ 0.18
HOXA1-202ENST00000355633 SUGT1Q9Y2Z0 365 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms