RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.1□□□□□ -0.15
COL6A3-203ENST00000353578 SESN3P58005 492 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 TRIM58Q8NG06 486 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 ANGPTL2Q9UKU9 493 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 SSH2Q76I76 1423 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 APOBRQ0VD83 1088 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 IQCA1Q86XH1 822 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 SIL1Q9H173 461 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 MAIP1Q8WWC4 291 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 MIS18AQ9NYP9 233 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 INF2Q27J81 1249 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 SPTY2D1Q68D10 685 aaPredicted RBP14.1□□□□□ -0.15
COL6A3-203ENST00000353578 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 TRAF1Q13077 416 aa14.1□□□□□ -0.15
COL6A3-203ENST00000353578 LLPHQ9BRT6 129 aaKnown RBP14.1□□□□□ -0.15
COL6A3-203ENST00000353578 CCDC169A6NNP5 214 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 HDGFL1Q5TGJ6 251 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 IFT81Q8WYA0 676 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 AIDAQ96BJ3 306 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 BICD1Q96G01 975 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 ANKRD20A4Q4UJ75 823 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 ANKRD20A8PQ5CZ79 823 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 ANKRD20A2Q5SQ80 823 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 ANKRD20A1Q5TYW2 823 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 NAA16Q6N069 864 aaPredicted RBP14.09□□□□□ -0.15
COL6A3-203ENST00000353578 LZICQ8WZA0 190 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 RAD21O60216 631 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 KCNK9Q9NPC2 374 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 DACT1Q9NYF0 836 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 A0A1B0GW55 424 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 DUX4L2P0CJ85 424 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 DUX4L3P0CJ86 424 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 DUX4L4P0CJ87 422 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 DUX4L5P0CJ88 424 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 DUX4L6P0CJ89 424 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 DUX4L7P0CJ90 424 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 HEATR3Q7Z4Q2 680 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 DUX4Q9UBX2 424 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 FGFR1OP2Q9NVK5 253 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 CCDC197Q8NCU1 140 aa14.09□□□□□ -0.15
COL6A3-203ENST00000353578 CNPY2Q9Y2B0 182 aa14.08□□□□□ -0.15
COL6A3-203ENST00000353578 ALS2CLQ60I27 953 aa14.08□□□□□ -0.15
COL6A3-203ENST00000353578 PIP4K2CQ8TBX8 421 aa14.08□□□□□ -0.15
COL6A3-203ENST00000353578 AOX1Q06278 1338 aa14.08□□□□□ -0.15
COL6A3-203ENST00000353578 IKQ13123 557 aaPredicted RBP14.08□□□□□ -0.16
COL6A3-203ENST00000353578 FERMT2Q96AC1 680 aa14.08□□□□□ -0.16
COL6A3-203ENST00000353578 LEO1Q8WVC0 666 aaPredicted RBP14.08□□□□□ -0.16
COL6A3-203ENST00000353578 MMRN2Q9H8L6 949 aa14.08□□□□□ -0.16
COL6A3-203ENST00000353578 BCAS4Q8TDM0 211 aa14.08□□□□□ -0.16
COL6A3-203ENST00000353578 TERF2Q15554 542 aa14.08□□□□□ -0.16
COL6A3-203ENST00000353578 HELBQ8NG08 1087 aaPredicted RBP14.08□□□□□ -0.16
COL6A3-203ENST00000353578 DNAJC25Q9H1X3 360 aa14.08□□□□□ -0.16
COL6A3-203ENST00000353578 ARHGAP10A1A4S6 786 aa14.08□□□□□ -0.16
COL6A3-203ENST00000353578 HSPA8P11142 646 aaKnown RBP14.08□□□□□ -0.16
COL6A3-203ENST00000353578 PRKAR2BP31323 418 aa14.08□□□□□ -0.16
COL6A3-203ENST00000353578 MAML3Q96JK9 1138 aa14.08□□□□□ -0.16
COL6A3-203ENST00000353578 SYNCQ9H7C4 482 aa14.08□□□□□ -0.16
COL6A3-203ENST00000353578 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.08□□□□□ -0.16
COL6A3-203ENST00000353578 NBPF20Q3BBV1 942 aa14.08□□□□□ -0.16
COL6A3-203ENST00000353578 CCDC84Q86UT8 332 aaPredicted RBP14.08□□□□□ -0.16
COL6A3-203ENST00000353578 CNNM2Q9H8M5 875 aa14.08□□□□□ -0.16
COL6A3-203ENST00000353578 KIF14Q15058 1648 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 ZC3H6P61129 1189 aaKnown RBP14.07□□□□□ -0.16
COL6A3-203ENST00000353578 UBXN1Q04323 297 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 TCP11Q8WWU5 503 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 PEG3Q9GZU2 1588 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 SPTLC2O15270 562 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 ZNF449Q6P9G9 518 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 CPLX3Q8WVH0 158 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 CCDC124Q96CT7 223 aaKnown RBP14.07□□□□□ -0.16
COL6A3-203ENST00000353578 STAT6P42226 847 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 JPH2Q9BR39 696 aaPredicted RBP14.07□□□□□ -0.16
COL6A3-203ENST00000353578 IQSEC3Q9UPP2 1182 aaPredicted RBP14.07□□□□□ -0.16
COL6A3-203ENST00000353578 ATP6V0A2Q9Y487 856 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 GSTA5Q7RTV2 222 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 IFNKQ9P0W0 207 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 XAB2Q9HCS7 855 aaKnown RBP14.07□□□□□ -0.16
COL6A3-203ENST00000353578 SAR1BQ9Y6B6 198 aa14.07□□□□□ -0.16
COL6A3-203ENST00000353578 ZNF830Q96NB3 372 aaPredicted RBP14.06□□□□□ -0.16
COL6A3-203ENST00000353578 CCDC144CPQ8IYA2 1237 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 TMX1Q9H3N1 280 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 LZTFL1Q9NQ48 299 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 RGS16O15492 202 aaPredicted RBP14.06□□□□□ -0.16
COL6A3-203ENST00000353578 GAS8O95995 478 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 ENAHQ8N8S7 591 aaPredicted RBP14.06□□□□□ -0.16
COL6A3-203ENST00000353578 CCDC63Q8NA47 563 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 SPZ1Q9BXG8 430 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 STK24Q9Y6E0 443 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 IARSP41252 1262 aaKnown RBP14.06□□□□□ -0.16
COL6A3-203ENST00000353578 PLEKHO1Q53GL0 409 aaPredicted RBP14.06□□□□□ -0.16
COL6A3-203ENST00000353578 C1orf115Q9H7X2 142 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 TACC3Q9Y6A5 838 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 TRIM68Q6AZZ1 485 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 SDCCAG3Q96C92 435 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 KIFC3Q9BVG8 833 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 CALML3P27482 149 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 NFE2L2Q16236 605 aa14.06□□□□□ -0.16
COL6A3-203ENST00000353578 TRIM42Q8IWZ5 723 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms