RNA–Protein interactions for RNA: ENST00000353334.10

CD74-202, Transcript of CD74 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD74, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-202ENST00000353334 TSPYL6Q8N831 410 aa16.41■□□□□ 0.22
CD74-202ENST00000353334 MS4A4AQ96JQ5 239 aa16.41■□□□□ 0.22
CD74-202ENST00000353334 H7C1W4 665 aa16.4■□□□□ 0.22
CD74-202ENST00000353334 APAF1O14727 1248 aa16.4■□□□□ 0.22
CD74-202ENST00000353334 MYO1BO43795 1136 aa16.4■□□□□ 0.22
CD74-202ENST00000353334 GNAI1P63096 354 aa16.4■□□□□ 0.22
CD74-202ENST00000353334 CCDC30Q5VVM6 783 aa16.4■□□□□ 0.22
CD74-202ENST00000353334 CDAN1Q8IWY9 1227 aa16.4■□□□□ 0.22
CD74-202ENST00000353334 HELBQ8NG08 1087 aaPredicted RBP16.4■□□□□ 0.22
CD74-202ENST00000353334 BRI3BPQ8WY22 251 aa16.4■□□□□ 0.22
CD74-202ENST00000353334 OTUD5Q96G74 571 aa16.4■□□□□ 0.22
CD74-202ENST00000353334 MPHOSPH8Q99549 860 aa16.4■□□□□ 0.22
CD74-202ENST00000353334 TAF5LO75529 589 aa16.39■□□□□ 0.21
CD74-202ENST00000353334 NEXNQ0ZGT2 675 aa16.39■□□□□ 0.21
CD74-202ENST00000353334 TAF1CQ15572 869 aaPredicted RBP16.39■□□□□ 0.21
CD74-202ENST00000353334 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.39■□□□□ 0.21
CD74-202ENST00000353334 SH3TC2Q8TF17 1288 aa16.39■□□□□ 0.21
CD74-202ENST00000353334 RBM5P52756 815 aaKnown RBP eCLIP16.38■□□□□ 0.21
CD74-202ENST00000353334 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
CD74-202ENST00000353334 NBPF11Q86T75 865 aa16.38■□□□□ 0.21
CD74-202ENST00000353334 ARHGAP39Q9C0H5 1083 aa16.38■□□□□ 0.21
CD74-202ENST00000353334 ARAP2Q8WZ64 1704 aa16.38■□□□□ 0.21
CD74-202ENST00000353334 SZT2Q5T011 3432 aa16.37■□□□□ 0.21
CD74-202ENST00000353334 CCL15-CCL14A0A0B4J2E2 113 aa16.37■□□□□ 0.21
CD74-202ENST00000353334 CCL15Q16663 113 aa16.37■□□□□ 0.21
CD74-202ENST00000353334 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.37■□□□□ 0.21
CD74-202ENST00000353334 G2E3Q7L622 706 aa16.37■□□□□ 0.21
CD74-202ENST00000353334 HSP90AA1P07900 732 aaKnown RBP16.36■□□□□ 0.21
CD74-202ENST00000353334 PDIA4P13667 645 aaKnown RBP16.36■□□□□ 0.21
CD74-202ENST00000353334 CASP7P55210 303 aa16.36■□□□□ 0.21
CD74-202ENST00000353334 AAMPQ13685 434 aa16.36■□□□□ 0.21
CD74-202ENST00000353334 VGLL4Q14135 290 aa16.36■□□□□ 0.21
CD74-202ENST00000353334 GCKRQ14397 625 aa16.36■□□□□ 0.21
CD74-202ENST00000353334 ZNF804AQ7Z570 1209 aa16.36■□□□□ 0.21
CD74-202ENST00000353334 WWC1Q8IX03 1113 aa16.36■□□□□ 0.21
CD74-202ENST00000353334 PLA2G12BQ9BX93 195 aa16.36■□□□□ 0.21
CD74-202ENST00000353334 ZFYVE28Q9HCC9 887 aa16.36■□□□□ 0.21
CD74-202ENST00000353334 CSF1RP07333 972 aa16.36■□□□□ 0.21
CD74-202ENST00000353334 IL1R1P14778 569 aa16.36■□□□□ 0.21
CD74-202ENST00000353334 C15orf52Q6ZUT6 534 aaKnown RBP16.36■□□□□ 0.21
CD74-202ENST00000353334 ZNF70Q9UC06 446 aaPredicted RBP16.36■□□□□ 0.21
CD74-202ENST00000353334 RANBP2P49792 3224 aaKnown RBP16.35■□□□□ 0.21
CD74-202ENST00000353334 ECM2O94769 699 aaPredicted RBP16.35■□□□□ 0.21
CD74-202ENST00000353334 ARHGEF6Q15052 776 aa16.35■□□□□ 0.21
CD74-202ENST00000353334 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
CD74-202ENST00000353334 SHISA4Q96DD7 197 aa16.35■□□□□ 0.21
CD74-202ENST00000353334 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
CD74-202ENST00000353334 TEPSINQ96N21 525 aa16.35■□□□□ 0.21
CD74-202ENST00000353334 TDRD3Q9H7E2 651 aaKnown RBP16.35■□□□□ 0.21
CD74-202ENST00000353334 RBM27Q9P2N5 1060 aaKnown RBP16.35■□□□□ 0.21
CD74-202ENST00000353334 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
CD74-202ENST00000353334 GTF2A2P52657 109 aa16.34■□□□□ 0.21
CD74-202ENST00000353334 FKBP1AP62942 108 aaKnown RBP16.34■□□□□ 0.21
CD74-202ENST00000353334 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
CD74-202ENST00000353334 TSR2Q969E8 191 aaKnown RBP16.34■□□□□ 0.21
CD74-202ENST00000353334 STK31Q9BXU1 1019 aa16.34■□□□□ 0.21
CD74-202ENST00000353334 TMEM39BQ9GZU3 492 aa16.34■□□□□ 0.21
CD74-202ENST00000353334 ANKRD18BA2A2Z9 1011 aa16.33■□□□□ 0.2
CD74-202ENST00000353334 TCP10L2B9ZVM9 353 aa16.33■□□□□ 0.2
CD74-202ENST00000353334 TNFAIP1Q13829 316 aa16.33■□□□□ 0.2
CD74-202ENST00000353334 IL16Q14005 1332 aa16.32■□□□□ 0.2
CD74-202ENST00000353334 LACTBP83111 547 aaPredicted RBP16.32■□□□□ 0.2
CD74-202ENST00000353334 MTFR1Q15390 333 aa16.32■□□□□ 0.2
CD74-202ENST00000353334 B4GALNT3Q6L9W6 998 aa16.32■□□□□ 0.2
CD74-202ENST00000353334 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.32■□□□□ 0.24e-10■■□□□ 14.5
CD74-202ENST00000353334 PLIN1O60240 522 aa16.31■□□□□ 0.2
CD74-202ENST00000353334 MAP3K9P80192 1104 aa16.31■□□□□ 0.2
CD74-202ENST00000353334 RBM10P98175 930 aaKnown RBP16.31■□□□□ 0.2
CD74-202ENST00000353334 MFSD14BQ5SR56 506 aa16.31■□□□□ 0.2
CD74-202ENST00000353334 DPF3Q92784 378 aa16.31■□□□□ 0.2
CD74-202ENST00000353334 TTF2Q9UNY4 1162 aaKnown RBP16.31■□□□□ 0.2
CD74-202ENST00000353334 CHMP3Q9Y3E7 222 aa16.31■□□□□ 0.2
CD74-202ENST00000353334 CSADQ9Y600 493 aa16.31■□□□□ 0.2
CD74-202ENST00000353334 BTBD19C9JJ37 291 aa16.3■□□□□ 0.2
CD74-202ENST00000353334 TLR2O60603 784 aa16.3■□□□□ 0.2
CD74-202ENST00000353334 NCLP19338 710 aaKnown RBP16.3■□□□□ 0.2
CD74-202ENST00000353334 KIF22Q14807 665 aa16.3■□□□□ 0.2
CD74-202ENST00000353334 DZIP1LQ8IYY4 767 aaKnown RBP16.3■□□□□ 0.2
CD74-202ENST00000353334 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
CD74-202ENST00000353334 SNCAIPQ9Y6H5 919 aa16.3■□□□□ 0.2
CD74-202ENST00000353334 FAM205AQ6ZU69 1335 aa16.3■□□□□ 0.2
CD74-202ENST00000353334 SPDYE5A6NIY4 337 aa16.29■□□□□ 0.2
CD74-202ENST00000353334 DLL1O00548 723 aa16.29■□□□□ 0.2
CD74-202ENST00000353334 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
CD74-202ENST00000353334 CTGFP29279 349 aa16.29■□□□□ 0.2
CD74-202ENST00000353334 FOXO4P98177 505 aa16.29■□□□□ 0.2
CD74-202ENST00000353334 IFIT5Q13325 482 aaKnown RBP16.29■□□□□ 0.2
CD74-202ENST00000353334 ZNF594Q96JF6 807 aaPredicted RBP16.29■□□□□ 0.2
CD74-202ENST00000353334 MYH16Q9H6N6 1097 aa16.29■□□□□ 0.2
CD74-202ENST00000353334 SERPINA10Q9UK55 444 aa16.29■□□□□ 0.2
CD74-202ENST00000353334 BRPF3Q9ULD4 1205 aa16.29■□□□□ 0.2
CD74-202ENST00000353334 CETPP11597 493 aa16.28■□□□□ 0.2
CD74-202ENST00000353334 CACNB3P54284 484 aa16.28■□□□□ 0.2
CD74-202ENST00000353334 FLIIQ13045 1269 aa16.28■□□□□ 0.2
CD74-202ENST00000353334 GRIK5Q16478 980 aa16.28■□□□□ 0.2
CD74-202ENST00000353334 CRKP46108 304 aa16.28■□□□□ 0.2
CD74-202ENST00000353334 GYG1P46976 350 aa16.28■□□□□ 0.2
CD74-202ENST00000353334 TAF7LQ5H9L4 462 aa16.28■□□□□ 0.2
CD74-202ENST00000353334 SLC17A8Q8NDX2 589 aa16.28■□□□□ 0.2
CD74-202ENST00000353334 LINS1Q8NG48 757 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms