RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 TTC12Q9H892 705 aaPredicted RBP12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 HOMER2Q9NSB8 354 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 CHST3Q7LGC8 479 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 EHBP1Q8NDI1 1231 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 SPC25Q9HBM1 224 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 MARCKSP29966 332 aaPredicted RBP12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 KIF22Q14807 665 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 SPECC1Q5M775 1068 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 TAF5LO75529 589 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 HLTFQ14527 1009 aaKnown RBP eCLIP12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 DHX58Q96C10 678 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 TMEM87BQ96K49 555 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 PKD2L1Q9P0L9 805 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 MCM7P33993 719 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 APOBRQ0VD83 1088 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 DCAF15Q66K64 600 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 ARMT1Q9H993 441 aa12.73□□□□□ -0.37
SLC6A20-201ENST00000353278 SPTLC2O15270 562 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 TEKT1Q969V4 418 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 FSD2A1L4K1 749 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 STAMBPO95630 424 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 CYLC1P35663 651 aaPredicted RBP12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 PRPHP41219 470 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 PSMD1Q99460 953 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 DBNDD2Q9BQY9 259 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 AS3MTQ9HBK9 375 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 TCP10Q12799 353 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 GRIPAP1Q4V328 841 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 ZKSCAN3Q9BRR0 538 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 AATFQ9NY61 560 aaKnown RBP eCLIP12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 BICDL2A1A5D9 508 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 PTPDC1A2A3K4 754 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 CPXCR1Q8N123 301 aa12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 ZNF594Q96JF6 807 aaPredicted RBP12.72□□□□□ -0.37
SLC6A20-201ENST00000353278 CEP170Q5SW79 1584 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 GOLGA6L10A0A0M3HER8 536 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 RPL13P26373 211 aaKnown RBP12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 GCKRQ14397 625 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 G2E3Q7L622 706 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 BRAPQ7Z569 592 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 SULF1Q8IWU6 871 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 DDX12PQ92771 950 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 CHL1O00533 1208 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 SMTNP53814 917 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 GTF2IP78347 998 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 LETM2Q2VYF4 491 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 ARHGEF12Q9NZN5 1544 aa12.71□□□□□ -0.37
SLC6A20-201ENST00000353278 CCDC66A2RUB6 948 aa12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 ATP2B4P23634 1241 aa12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 KIAA0753Q2KHM9 967 aa12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 GIGYF2Q6Y7W6 1299 aaKnown RBP12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 TBC1D32Q96NH3 1257 aa12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 AZI2Q9H6S1 392 aa12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 USP25Q9UHP3 1055 aa12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 PABPC4Q13310 644 aaKnown RBP eCLIP12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 TMCO3Q6UWJ1 677 aa12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 IFT74Q96LB3 600 aa12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 TTF2Q9UNY4 1162 aaKnown RBP12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 IKBKGQ9Y6K9 419 aa12.71□□□□□ -0.38
SLC6A20-201ENST00000353278 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 MFSD14BQ5SR56 506 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 CCDC65Q8IXS2 484 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 IQUBQ8NA54 791 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 B4E1Z4 1266 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 MYCLP12524 364 aaPredicted RBP12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 RFX1P22670 979 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 ARHGEF6Q15052 776 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 HAUS3Q68CZ6 603 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 DCPSQ96C86 337 aaKnown RBP12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 GINS2Q9Y248 185 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 SLC8A3P57103 927 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 SMC1AQ14683 1233 aaKnown RBP12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 ZNF710Q8N1W2 664 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 M0QZ92 97 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 PHKG2P15735 406 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 FNBP1Q96RU3 617 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 MAST1Q9Y2H9 1570 aa12.7□□□□□ -0.38
SLC6A20-201ENST00000353278 GPAA1O43292 621 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 RXRAP19793 462 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 NPHP4O75161 1426 aaPredicted RBP12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 LPXNO60711 386 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 UBASH3AP57075 661 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 RBM10P98175 930 aaKnown RBP12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 MAPKAPK5Q8IW41 473 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 SPATA5Q8NB90 893 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 RGS22Q8NE09 1264 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 LOC102724428A0A0B4J2F2 783 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 SIK1P57059 783 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 KRT27Q7Z3Y8 459 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 USP40Q9NVE5 1235 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 TRIM6Q9C030 488 aaPredicted RBP12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 JADE2Q9NQC1 790 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 ZBTB40Q9NUA8 1239 aa12.69□□□□□ -0.38
SLC6A20-201ENST00000353278 PRDM1O75626 825 aa12.68□□□□□ -0.38
SLC6A20-201ENST00000353278 DEXIO95424 95 aa12.68□□□□□ -0.38
SLC6A20-201ENST00000353278 HARSP12081 509 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms