RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 COPRSQ9NQ92 184 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 FANCGO15287 622 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 ARHGAP6O43182 974 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 TAF5LO75529 589 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 TXLNAP40222 546 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 ME1P48163 572 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 ZC3H6P61129 1189 aaKnown RBP17.23■□□□□ 0.35
TRAF3-202ENST00000351691 PPP2R3AQ06190 1150 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 DPCR1Q3MIW9 517 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 SYTL4Q96C24 671 aaPredicted RBP17.23■□□□□ 0.35
TRAF3-202ENST00000351691 VWA3AA6NCI4 1184 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 POTEB2H3BUK9 544 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 LMAN1P49257 510 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 CEBPZQ03701 1054 aaKnown RBP17.23■□□□□ 0.35
TRAF3-202ENST00000351691 SCRN1Q12765 414 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 Q6ZUG5 572 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 MKRN1Q9UHC7 482 aaKnown RBP17.23■□□□□ 0.35
TRAF3-202ENST00000351691 TAF6LQ9Y6J9 622 aa17.23■□□□□ 0.35
TRAF3-202ENST00000351691 HMGB1P09429 215 aaKnown RBP17.22■□□□□ 0.35
TRAF3-202ENST00000351691 LONRF2Q1L5Z9 754 aa17.22■□□□□ 0.35
TRAF3-202ENST00000351691 ANKRD13DQ6ZTN6 518 aa17.22■□□□□ 0.35
TRAF3-202ENST00000351691 COPS6Q7L5N1 327 aa17.22■□□□□ 0.35
TRAF3-202ENST00000351691 PCDHA7Q9UN72 937 aa17.22■□□□□ 0.35
TRAF3-202ENST00000351691 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
TRAF3-202ENST00000351691 TNS3Q68CZ2 1445 aa17.22■□□□□ 0.35
TRAF3-202ENST00000351691 NEDD4P46934 1319 aa17.22■□□□□ 0.35
TRAF3-202ENST00000351691 GUCY2CP25092 1073 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 SLC39A6Q13433 755 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 TTC5Q8N0Z6 440 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 FMNL2Q96PY5 1086 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 MYD88Q99836 296 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 FSD1Q9BTV5 496 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 CCDC8Q9H0W5 538 aaPredicted RBP17.21■□□□□ 0.35
TRAF3-202ENST00000351691 SLAIN2Q9P270 581 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 MEGF6O75095 1541 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
TRAF3-202ENST00000351691 A0A087WWV3 80 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 HSP90B1P14625 803 aaKnown RBP17.21■□□□□ 0.35
TRAF3-202ENST00000351691 USP5P45974 858 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 CABLES1Q8TDN4 633 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 CCDC34Q96HJ3 373 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 PPP2R2CQ9Y2T4 447 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 NHSL1Q5SYE7 1610 aa17.21■□□□□ 0.35
TRAF3-202ENST00000351691 LAMB4A4D0S4 1761 aa17.21■□□□□ 0.34
TRAF3-202ENST00000351691 SALL1Q9NSC2 1324 aa17.2■□□□□ 0.34
TRAF3-202ENST00000351691 H3BQF6 201 aa17.2■□□□□ 0.34
TRAF3-202ENST00000351691 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
TRAF3-202ENST00000351691 TTC31Q49AM3 519 aaPredicted RBP17.2■□□□□ 0.34
TRAF3-202ENST00000351691 TICAM2Q86XR7 235 aa17.2■□□□□ 0.34
TRAF3-202ENST00000351691 VSTM4Q8IW00 320 aa17.2■□□□□ 0.34
TRAF3-202ENST00000351691 KCNG4Q8TDN1 519 aa17.2■□□□□ 0.34
TRAF3-202ENST00000351691 ZNF496Q96IT1 587 aaPredicted RBP17.2■□□□□ 0.34
TRAF3-202ENST00000351691 EIF3JO75822 258 aaKnown RBP17.2■□□□□ 0.34
TRAF3-202ENST00000351691 YEATS4O95619 227 aa17.2■□□□□ 0.34
TRAF3-202ENST00000351691 SLC3A2P08195 630 aaKnown RBP17.2■□□□□ 0.34
TRAF3-202ENST00000351691 ATP5JP18859 108 aa17.2■□□□□ 0.34
TRAF3-202ENST00000351691 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
TRAF3-202ENST00000351691 TUBB2AQ13885 445 aa17.2■□□□□ 0.34
TRAF3-202ENST00000351691 TMEM139Q8IV31 216 aa17.2■□□□□ 0.34
TRAF3-202ENST00000351691 TUBB2BQ9BVA1 445 aa17.2■□□□□ 0.34
TRAF3-202ENST00000351691 FTOQ9C0B1 505 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRAF3-202ENST00000351691 HDXQ7Z353 690 aa17.19■□□□□ 0.34
TRAF3-202ENST00000351691 KIFC2Q96AC6 838 aa17.19■□□□□ 0.34
TRAF3-202ENST00000351691 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
TRAF3-202ENST00000351691 RAB21Q9UL25 225 aa17.19■□□□□ 0.34
TRAF3-202ENST00000351691 LTBP4Q8N2S1 1624 aa17.19■□□□□ 0.34
TRAF3-202ENST00000351691 ABCA3Q99758 1704 aa17.19■□□□□ 0.34
TRAF3-202ENST00000351691 AFDNP55196 1824 aaKnown RBP17.19■□□□□ 0.34
TRAF3-202ENST00000351691 MYL6BP14649 208 aa17.19■□□□□ 0.34
TRAF3-202ENST00000351691 RFX5P48382 616 aaPredicted RBP17.19■□□□□ 0.34
TRAF3-202ENST00000351691 NDUFA8P51970 172 aa17.19■□□□□ 0.34
TRAF3-202ENST00000351691 ZNF589Q86UQ0 364 aaPredicted RBP17.19■□□□□ 0.34
TRAF3-202ENST00000351691 AGXT2Q9BYV1 514 aa17.19■□□□□ 0.34
TRAF3-202ENST00000351691 LAMA4Q16363 1823 aa17.18■□□□□ 0.34
TRAF3-202ENST00000351691 PTPDC1A2A3K4 754 aa17.18■□□□□ 0.34
TRAF3-202ENST00000351691 CTDNEP1O95476 244 aa17.18■□□□□ 0.34
TRAF3-202ENST00000351691 UBASH3AP57075 661 aa17.18■□□□□ 0.34
TRAF3-202ENST00000351691 ILDR1Q86SU0 546 aaPredicted RBP17.18■□□□□ 0.34
TRAF3-202ENST00000351691 LINC00301Q8NCQ3 95 aa17.18■□□□□ 0.34
TRAF3-202ENST00000351691 PPM1EQ8WY54 764 aa17.18■□□□□ 0.34
TRAF3-202ENST00000351691 HSD3B7Q9H2F3 369 aa17.18■□□□□ 0.34
TRAF3-202ENST00000351691 JRKLQ9Y4A0 524 aa17.18■□□□□ 0.34
TRAF3-202ENST00000351691 CPDO75976 1380 aa17.18■□□□□ 0.34
TRAF3-202ENST00000351691 ARFGEF2Q9Y6D5 1785 aa17.18■□□□□ 0.34
TRAF3-202ENST00000351691 STX10O60499 249 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 CPP00450 1065 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 CSB-PGBD3P0DP91 1061 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 MMP14P50281 582 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 GNL2Q13823 731 aaKnown RBP17.17■□□□□ 0.34
TRAF3-202ENST00000351691 CERS3Q8IU89 383 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 NCAPGQ9BPX3 1015 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 BOLA2Q9H3K6 86 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 ROBO1Q9Y6N7 1651 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 CORO7P57737 925 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 GNG11P61952 73 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 EPHA10Q5JZY3 1008 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 PLBD2Q8NHP8 589 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 POLR3EQ9NVU0 708 aa17.17■□□□□ 0.34
TRAF3-202ENST00000351691 TLR7Q9NYK1 1049 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms