RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 MAGEB6Q8N7X4 407 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 PPP1R9BQ96SB3 815 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 SETDB2Q96T68 719 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 TSPY26PQ9H489 355 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 GNL3LQ9NVN8 582 aaKnown RBP19.65■□□□□ 0.74
SAMM50-201ENST00000350028 RTCBQ9Y3I0 505 aaKnown RBP19.65■□□□□ 0.74
SAMM50-201ENST00000350028 NAP1L2Q9ULW6 460 aaPredicted RBP19.64■□□□□ 0.73
SAMM50-201ENST00000350028 A0A1B0GUL6 1792 aa19.63■□□□□ 0.73
SAMM50-201ENST00000350028 CASZ1Q86V15 1759 aa19.63■□□□□ 0.73
SAMM50-201ENST00000350028 GNPATO15228 680 aa19.63■□□□□ 0.73
SAMM50-201ENST00000350028 GNAT2P19087 354 aa19.63■□□□□ 0.73
SAMM50-201ENST00000350028 ANTXR2P58335 489 aa19.63■□□□□ 0.73
SAMM50-201ENST00000350028 C3orf67Q6ZVT6 689 aa19.63■□□□□ 0.73
SAMM50-201ENST00000350028 TTC6Q86TZ1 520 aa19.63■□□□□ 0.73
SAMM50-201ENST00000350028 ZNF804BA4D1E1 1349 aa19.63■□□□□ 0.73
SAMM50-201ENST00000350028 SALL1Q9NSC2 1324 aa19.63■□□□□ 0.73
SAMM50-201ENST00000350028 COL24A1Q17RW2 1714 aa19.63■□□□□ 0.73
SAMM50-201ENST00000350028 DHX16O60231 1041 aaKnown RBP19.62■□□□□ 0.73
SAMM50-201ENST00000350028 NLRP3Q96P20 1036 aa19.62■□□□□ 0.73
SAMM50-201ENST00000350028 LY75O60449 1722 aa19.62■□□□□ 0.73
SAMM50-201ENST00000350028 TPTE2Q6XPS3 522 aa19.62■□□□□ 0.73
SAMM50-201ENST00000350028 NBPF3Q9H094 633 aa19.62■□□□□ 0.73
SAMM50-201ENST00000350028 SRP68Q9UHB9 627 aaKnown RBP19.62■□□□□ 0.73
SAMM50-201ENST00000350028 MINPP1Q9UNW1 487 aa19.62■□□□□ 0.73
SAMM50-201ENST00000350028 COL4A1P02462 1669 aa19.61■□□□□ 0.73
SAMM50-201ENST00000350028 KLF18A0A0U1RQI7 1052 aa19.61■□□□□ 0.73
SAMM50-201ENST00000350028 MBD4O95243 580 aa19.61■□□□□ 0.73
SAMM50-201ENST00000350028 FAM173BQ6P4H8 233 aa19.61■□□□□ 0.73
SAMM50-201ENST00000350028 NBPF5PQ86XG9 351 aaPredicted RBP19.61■□□□□ 0.73
SAMM50-201ENST00000350028 IFNL3Q8IZI9 196 aa19.61■□□□□ 0.73
SAMM50-201ENST00000350028 SPATA32Q96LK8 384 aa19.61■□□□□ 0.73
SAMM50-201ENST00000350028 NCOA5Q9HCD5 579 aaKnown RBP19.61■□□□□ 0.73
SAMM50-201ENST00000350028 LRP2BPQ9P2M1 347 aa19.61■□□□□ 0.73
SAMM50-201ENST00000350028 PNPLA7Q6ZV29 1317 aa19.61■□□□□ 0.73
SAMM50-201ENST00000350028 TAF1LQ8IZX4 1826 aa19.61■□□□□ 0.73
SAMM50-201ENST00000350028 CAVIN4Q5BKX8 364 aa19.6■□□□□ 0.73
SAMM50-201ENST00000350028 TBC1D10CQ8IV04 446 aa19.6■□□□□ 0.73
SAMM50-201ENST00000350028 NAPBQ9H115 298 aa19.6■□□□□ 0.73
SAMM50-201ENST00000350028 GPHNQ9NQX3 736 aaPredicted RBP19.6■□□□□ 0.73
SAMM50-201ENST00000350028 CFAP45Q9UL16 551 aa19.6■□□□□ 0.73
SAMM50-201ENST00000350028 RPS8P62241 208 aaKnown RBP19.59■□□□□ 0.73
SAMM50-201ENST00000350028 SMIM5Q71RC9 77 aa19.59■□□□□ 0.73
SAMM50-201ENST00000350028 LEO1Q8WVC0 666 aaPredicted RBP19.59■□□□□ 0.73
SAMM50-201ENST00000350028 ARHGEF1Q92888 912 aaKnown RBP19.59■□□□□ 0.73
SAMM50-201ENST00000350028 TRIM44Q96DX7 344 aaPredicted RBP19.59■□□□□ 0.73
SAMM50-201ENST00000350028 TMEM87BQ96K49 555 aa19.59■□□□□ 0.73
SAMM50-201ENST00000350028 NACAP1Q9BZK3 213 aa19.59■□□□□ 0.73
SAMM50-201ENST00000350028 ARMT1Q9H993 441 aa19.59■□□□□ 0.73
SAMM50-201ENST00000350028 TFIP11Q9UBB9 837 aaKnown RBP19.59■□□□□ 0.73
SAMM50-201ENST00000350028 ATL3Q6DD88 541 aa19.59■□□□□ 0.73
SAMM50-201ENST00000350028 CELF1Q92879 486 aaKnown RBP19.59■□□□□ 0.73
SAMM50-201ENST00000350028 RTN4Q9NQC3 1192 aaKnown RBP19.59■□□□□ 0.73
SAMM50-201ENST00000350028 GOLGA8BA8MQT2 603 aa19.58■□□□□ 0.72
SAMM50-201ENST00000350028 GSG1L2A8MUP6 293 aa19.58■□□□□ 0.72
SAMM50-201ENST00000350028 ANKRD2Q9GZV1 360 aa19.58■□□□□ 0.72
SAMM50-201ENST00000350028 EPB41L4AQ9HCS5 686 aaPredicted RBP19.58■□□□□ 0.72
SAMM50-201ENST00000350028 DENND2AQ9ULE3 1009 aa19.58■□□□□ 0.72
SAMM50-201ENST00000350028 ANGEL1Q9UNK9 670 aaKnown RBP19.58■□□□□ 0.72
SAMM50-201ENST00000350028 HPS5Q9UPZ3 1129 aa19.58■□□□□ 0.72
SAMM50-201ENST00000350028 TAF1P21675 1872 aa19.58■□□□□ 0.72
SAMM50-201ENST00000350028 CARMIL3Q8ND23 1372 aa19.57■□□□□ 0.72
SAMM50-201ENST00000350028 GOLGA6L4A6NEF3 574 aa19.57■□□□□ 0.72
SAMM50-201ENST00000350028 SEMA3EO15041 775 aa19.57■□□□□ 0.72
SAMM50-201ENST00000350028 GYG1P46976 350 aa19.57■□□□□ 0.72
SAMM50-201ENST00000350028 RGS22Q8NE09 1264 aa19.57■□□□□ 0.72
SAMM50-201ENST00000350028 CNNM2Q9H8M5 875 aa19.57■□□□□ 0.72
SAMM50-201ENST00000350028 SH2B2O14492 632 aaPredicted RBP19.56■□□□□ 0.72
SAMM50-201ENST00000350028 FDPSP14324 419 aaKnown RBP19.56■□□□□ 0.72
SAMM50-201ENST00000350028 TRAPPC3LQ5T215 181 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 CYB5R4Q7L1T6 521 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 SLC4A4Q9Y6R1 1079 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 MYH15Q9Y2K3 1946 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 C4BP0C0L5 1744 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 CYP7A1P22680 504 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 UVSSAQ2YD98 709 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 TPRNQ4KMQ1 711 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 FAM196AQ6ZSG2 479 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 FBXO33Q7Z6M2 555 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 VPS37DQ86XT2 251 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 LCORLQ8N3X6 602 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 FAM84BQ96KN1 310 aaPredicted RBP19.56■□□□□ 0.72
SAMM50-201ENST00000350028 ZNF396Q96N95 335 aaPredicted RBP19.56■□□□□ 0.72
SAMM50-201ENST00000350028 KRT23Q9C075 422 aa19.56■□□□□ 0.72
SAMM50-201ENST00000350028 TIAM2Q8IVF5 1701 aa19.55■□□□□ 0.72
SAMM50-201ENST00000350028 B4E1Z4 1266 aa19.55■□□□□ 0.72
SAMM50-201ENST00000350028 CPLX1O14810 134 aa19.55■□□□□ 0.72
SAMM50-201ENST00000350028 RFC4P35249 363 aa19.55■□□□□ 0.72
SAMM50-201ENST00000350028 PDS5AQ29RF7 1337 aaKnown RBP19.54■□□□□ 0.72
SAMM50-201ENST00000350028 CHD4Q14839 1912 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 TDO2P48775 406 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 AKNAD1Q5T1N1 836 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 PDLIM2Q96JY6 352 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 BCL11BQ9C0K0 894 aaPredicted RBP19.54■□□□□ 0.72
SAMM50-201ENST00000350028 RAI14Q9P0K7 980 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 ABCF2Q9UG63 623 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 IQSEC3Q9UPP2 1182 aaPredicted RBP19.54■□□□□ 0.72
SAMM50-201ENST00000350028 ZBTB22O15209 634 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 PRKAB2O43741 272 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 TRIM37O94972 964 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 ADD1P35611 737 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 361.5 ms