RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CCDC12Q8WUD4 166 aaPredicted RBP12.21□□□□□ -0.46
CAPN3-203ENST00000349748 PHACTR3Q96KR7 559 aa12.21□□□□□ -0.46
CAPN3-203ENST00000349748 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.46
CAPN3-203ENST00000349748 RAB21Q9UL25 225 aa12.21□□□□□ -0.46
CAPN3-203ENST00000349748 SSH2Q76I76 1423 aa12.2□□□□□ -0.46
CAPN3-203ENST00000349748 PRKAR2BP31323 418 aa12.2□□□□□ -0.46
CAPN3-203ENST00000349748 IRAK1P51617 712 aa12.2□□□□□ -0.46
CAPN3-203ENST00000349748 ADCK5Q3MIX3 580 aa12.2□□□□□ -0.46
CAPN3-203ENST00000349748 LARP1Q6PKG0 1096 aaKnown RBP12.2□□□□□ -0.46
CAPN3-203ENST00000349748 GOLPH3LQ9H4A5 285 aa12.2□□□□□ -0.46
CAPN3-203ENST00000349748 ZNF142P52746 1687 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-203ENST00000349748 ADCY9O60503 1353 aa12.2□□□□□ -0.46
CAPN3-203ENST00000349748 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
CAPN3-203ENST00000349748 ENO4A6NNW6 628 aa12.2□□□□□ -0.46
CAPN3-203ENST00000349748 SRGAP1Q7Z6B7 1085 aa12.2□□□□□ -0.46
CAPN3-203ENST00000349748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.2□□□□□ -0.46
CAPN3-203ENST00000349748 NUDT16Q96DE0 195 aaKnown RBP12.2□□□□□ -0.46
CAPN3-203ENST00000349748 DDX20Q9UHI6 824 aaKnown RBP12.2□□□□□ -0.46
CAPN3-203ENST00000349748 SPG7Q9UQ90 795 aa12.2□□□□□ -0.46
CAPN3-203ENST00000349748 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
CAPN3-203ENST00000349748 CUTAO60888 179 aa12.19□□□□□ -0.46
CAPN3-203ENST00000349748 RPSAP08865 295 aaKnown RBP12.19□□□□□ -0.46
CAPN3-203ENST00000349748 WLSQ5T9L3 541 aa12.19□□□□□ -0.46
CAPN3-203ENST00000349748 XAGE2Q96GT9 111 aa12.19□□□□□ -0.46
CAPN3-203ENST00000349748 GDAP1L1Q96MZ0 367 aa12.19□□□□□ -0.46
CAPN3-203ENST00000349748 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
CAPN3-203ENST00000349748 A0A1B0GUA9 196 aa12.19□□□□□ -0.46
CAPN3-203ENST00000349748 ZSCAN12O43309 604 aa12.19□□□□□ -0.46
CAPN3-203ENST00000349748 HMOX1P09601 288 aa12.19□□□□□ -0.46
CAPN3-203ENST00000349748 COL9A3Q14050 684 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-203ENST00000349748 DPCR1Q3MIW9 517 aa12.19□□□□□ -0.46
CAPN3-203ENST00000349748 JAKMIP1Q96N16 626 aaKnown RBP12.19□□□□□ -0.46
CAPN3-203ENST00000349748 FTOQ9C0B1 505 aaKnown RBP eCLIP12.19□□□□□ -0.46
CAPN3-203ENST00000349748 MBIPQ9NS73 344 aa12.19□□□□□ -0.46
CAPN3-203ENST00000349748 ZNF202O95125 648 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 TOGARAM2Q6ZUX3 1019 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 CCAR1Q8IX12 1150 aaKnown RBP12.18□□□□□ -0.46
CAPN3-203ENST00000349748 KLC4Q9NSK0 619 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 TPCN1Q9ULQ1 816 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.18□□□□□ -0.46
CAPN3-203ENST00000349748 PPP1R12BO60237 982 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-203ENST00000349748 KINO60870 393 aaKnown RBP12.18□□□□□ -0.46
CAPN3-203ENST00000349748 ATP1A3P13637 1013 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 LMOD1P29536 600 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-203ENST00000349748 E2F5Q15329 346 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 CEP85LQ5SZL2 805 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 MSL3Q8N5Y2 521 aaKnown RBP12.18□□□□□ -0.46
CAPN3-203ENST00000349748 FAM210AQ96ND0 272 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 DESI2Q9BSY9 194 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 NAT10Q9H0A0 1025 aaKnown RBP12.18□□□□□ -0.46
CAPN3-203ENST00000349748 SALL3Q9BXA9 1300 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 PDHBP11177 359 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 CEP112Q8N8E3 955 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 MSANTD4Q8NCY6 345 aa12.18□□□□□ -0.46
CAPN3-203ENST00000349748 ZNF335Q9H4Z2 1342 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-203ENST00000349748 SHOX2O60902 331 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-203ENST00000349748 RPS6KA3P51812 740 aa12.17□□□□□ -0.46
CAPN3-203ENST00000349748 RWDD2BP57060 319 aa12.17□□□□□ -0.46
CAPN3-203ENST00000349748 AMOTL1Q8IY63 956 aa12.17□□□□□ -0.46
CAPN3-203ENST00000349748 DPF2Q92785 391 aa12.17□□□□□ -0.46
CAPN3-203ENST00000349748 SPDL1Q96EA4 605 aa12.17□□□□□ -0.46
CAPN3-203ENST00000349748 SHTN1A0MZ66 631 aa12.17□□□□□ -0.46
CAPN3-203ENST00000349748 BIN1O00499 593 aa12.17□□□□□ -0.46
CAPN3-203ENST00000349748 SSBP05455 408 aaKnown RBP eCLIP12.17□□□□□ -0.46
CAPN3-203ENST00000349748 TCEANC2Q96MN5 208 aa12.17□□□□□ -0.46
CAPN3-203ENST00000349748 LSG1Q9H089 658 aaKnown RBP12.17□□□□□ -0.46
CAPN3-203ENST00000349748 FCHSD2O94868 740 aa12.16□□□□□ -0.46
CAPN3-203ENST00000349748 SNUPNO95149 360 aaKnown RBP12.16□□□□□ -0.46
CAPN3-203ENST00000349748 PRR36Q9H6K5 1346 aa12.16□□□□□ -0.46
CAPN3-203ENST00000349748 NAP1L1P55209 391 aaKnown RBP12.16□□□□□ -0.46
CAPN3-203ENST00000349748 TBC1D25Q3MII6 688 aa12.16□□□□□ -0.46
CAPN3-203ENST00000349748 SH2B1Q9NRF2 756 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-203ENST00000349748 CCDC61Q9Y6R9 512 aa12.16□□□□□ -0.46
CAPN3-203ENST00000349748 KIAA0754O94854 1291 aa12.15□□□□□ -0.46
CAPN3-203ENST00000349748 FSBPO95073 299 aa12.15□□□□□ -0.46
CAPN3-203ENST00000349748 FANCCQ00597 558 aa12.15□□□□□ -0.46
CAPN3-203ENST00000349748 KCNB1Q14721 858 aa12.15□□□□□ -0.46
CAPN3-203ENST00000349748 RBBP5Q15291 538 aaKnown RBP12.15□□□□□ -0.46
CAPN3-203ENST00000349748 HDGFL2Q7Z4V5 671 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-203ENST00000349748 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-203ENST00000349748 A0A0U1RQJ8 604 aa12.15□□□□□ -0.46
CAPN3-203ENST00000349748 GGCXP38435 758 aa12.15□□□□□ -0.46
CAPN3-203ENST00000349748 GNGT1P63211 74 aa12.15□□□□□ -0.46
CAPN3-203ENST00000349748 TRAF1Q13077 416 aa12.15□□□□□ -0.46
CAPN3-203ENST00000349748 STK3Q13188 491 aa12.15□□□□□ -0.46
CAPN3-203ENST00000349748 TMEM139Q8IV31 216 aa12.15□□□□□ -0.46
CAPN3-203ENST00000349748 ATRIPQ8WXE1 791 aa12.15□□□□□ -0.46
CAPN3-203ENST00000349748 TMCO5BA8MYB1 307 aa12.15□□□□□ -0.47
CAPN3-203ENST00000349748 TMEM232C9JQI7 657 aa12.15□□□□□ -0.47
CAPN3-203ENST00000349748 HMMRO75330 724 aa12.15□□□□□ -0.47
CAPN3-203ENST00000349748 PYGLP06737 847 aa12.15□□□□□ -0.47
CAPN3-203ENST00000349748 PRPF40BQ6NWY9 871 aaKnown RBP12.15□□□□□ -0.47
CAPN3-203ENST00000349748 FAM76AQ8TAV0 307 aa12.15□□□□□ -0.47
CAPN3-203ENST00000349748 ZSCAN31Q96LW9 406 aaPredicted RBP12.15□□□□□ -0.47
CAPN3-203ENST00000349748 SCLT1Q96NL6 688 aa12.15□□□□□ -0.47
CAPN3-203ENST00000349748 LRRCC1Q9C099 1032 aa12.15□□□□□ -0.47
CAPN3-203ENST00000349748 LZTFL1Q9NQ48 299 aa12.15□□□□□ -0.47
CAPN3-203ENST00000349748 G3BP2Q9UN86 482 aaKnown RBP12.15□□□□□ -0.47
CAPN3-203ENST00000349748 CDC42BPGQ6DT37 1551 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 POTEB2H3BUK9 544 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms