RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 MRPS25P82663 173 aaKnown RBP17.42■□□□□ 0.38
PTBP1-201ENST00000349038 CT47A1Q5JQC4 288 aaPredicted RBP17.42■□□□□ 0.38
PTBP1-201ENST00000349038 ZNF569Q5MCW4 686 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 EXOC4Q96A65 974 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 BAG1Q99933 345 aaPredicted RBP17.42■□□□□ 0.38
PTBP1-201ENST00000349038 USP54Q70EL1 1684 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 A0A0G2JLW4 131 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 HIP1O00291 1037 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 CAVIN2O95810 425 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 GUCY2CP25092 1073 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 NLRP6P59044 892 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 ATP2B2Q01814 1243 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 PNOCQ13519 176 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 ZNF396Q96N95 335 aaPredicted RBP17.42■□□□□ 0.38
PTBP1-201ENST00000349038 NCAPGQ9BPX3 1015 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 DIP2AQ14689 1571 aa17.41■□□□□ 0.38
PTBP1-201ENST00000349038 VWA3AA6NCI4 1184 aa17.41■□□□□ 0.38
PTBP1-201ENST00000349038 MAGEA9P43362 315 aa17.41■□□□□ 0.38
PTBP1-201ENST00000349038 EAF2Q96CJ1 260 aaPredicted RBP17.41■□□□□ 0.38
PTBP1-201ENST00000349038 PNKPQ96T60 521 aa17.41■□□□□ 0.38
PTBP1-201ENST00000349038 OSBPL5Q9H0X9 879 aaPredicted RBP17.41■□□□□ 0.38
PTBP1-201ENST00000349038 AKAP2Q9Y2D5 859 aa17.41■□□□□ 0.38
PTBP1-201ENST00000349038 ZNF202O95125 648 aa17.4■□□□□ 0.38
PTBP1-201ENST00000349038 IVLP07476 585 aa17.4■□□□□ 0.38
PTBP1-201ENST00000349038 RXRAP19793 462 aa17.4■□□□□ 0.38
PTBP1-201ENST00000349038 CCT5P48643 541 aa17.4■□□□□ 0.38
PTBP1-201ENST00000349038 JCADQ9P266 1359 aa17.4■□□□□ 0.38
PTBP1-201ENST00000349038 PLEKHO1Q53GL0 409 aaPredicted RBP17.4■□□□□ 0.38
PTBP1-201ENST00000349038 GSPT2Q8IYD1 628 aaKnown RBP17.4■□□□□ 0.38
PTBP1-201ENST00000349038 EHD4Q9H223 541 aa17.4■□□□□ 0.38
PTBP1-201ENST00000349038 SAMM50Q9Y512 469 aa17.4■□□□□ 0.38
PTBP1-201ENST00000349038 RGPD8O14715 1765 aaPredicted RBP17.4■□□□□ 0.38
PTBP1-201ENST00000349038 PATL2C9JE40 543 aaKnown RBP17.4■□□□□ 0.38
PTBP1-201ENST00000349038 PES1O00541 588 aaKnown RBP17.4■□□□□ 0.38
PTBP1-201ENST00000349038 TPM1P09493 284 aa17.4■□□□□ 0.38
PTBP1-201ENST00000349038 MED23Q9ULK4 1368 aa17.39■□□□□ 0.37
PTBP1-201ENST00000349038 EIF3JO75822 258 aaKnown RBP17.39■□□□□ 0.37
PTBP1-201ENST00000349038 ALDH1L1O75891 902 aa17.39■□□□□ 0.37
PTBP1-201ENST00000349038 ZSCAN16Q9H4T2 348 aaPredicted RBP17.39■□□□□ 0.37
PTBP1-201ENST00000349038 ATG3Q9NT62 314 aa17.39■□□□□ 0.37
PTBP1-201ENST00000349038 FRMD3A2A2Y4 597 aa17.39■□□□□ 0.37
PTBP1-201ENST00000349038 GIGYF1O75420 1035 aaPredicted RBP17.39■□□□□ 0.37
PTBP1-201ENST00000349038 CAPZA3Q96KX2 299 aa17.39■□□□□ 0.37
PTBP1-201ENST00000349038 SOWAHDA6NJG2 315 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 KCNQ3O43525 872 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 STX17P56962 302 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 HSP90AB3PQ58FF7 597 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 GPIHBP1Q8IV16 184 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 PPM1EQ8WY54 764 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 IMPACTQ9P2X3 320 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 TXLNAP40222 546 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 TSGA10IPQ3SY00 556 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 CTR9Q6PD62 1173 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 FAM107BQ9H098 131 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 LGR6Q9HBX8 967 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 GEMIN8Q9NWZ8 242 aaKnown RBP17.38■□□□□ 0.37
PTBP1-201ENST00000349038 HDXQ7Z353 690 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 ANKRD20A12PQ8NF67 263 aa17.38■□□□□ 0.37
PTBP1-201ENST00000349038 PHLPP2Q6ZVD8 1323 aa17.37■□□□□ 0.37
PTBP1-201ENST00000349038 SASH1O94885 1247 aa17.37■□□□□ 0.37
PTBP1-201ENST00000349038 MAP2K2P36507 400 aa17.37■□□□□ 0.37
PTBP1-201ENST00000349038 VSNL1P62760 191 aa17.37■□□□□ 0.37
PTBP1-201ENST00000349038 ZNF526Q8TF50 670 aaPredicted RBP17.37■□□□□ 0.37
PTBP1-201ENST00000349038 SMARCC1Q92922 1105 aaPredicted RBP17.37■□□□□ 0.37
PTBP1-201ENST00000349038 NEUROD6Q96NK8 337 aa17.37■□□□□ 0.37
PTBP1-201ENST00000349038 CLIC6Q96NY7 704 aa17.37■□□□□ 0.37
PTBP1-201ENST00000349038 CDC5LQ99459 802 aaKnown RBP17.37■□□□□ 0.37
PTBP1-201ENST00000349038 AMOTL2Q9Y2J4 779 aa17.37■□□□□ 0.37
PTBP1-201ENST00000349038 CPLX1O14810 134 aa17.37■□□□□ 0.37
PTBP1-201ENST00000349038 CCP110O43303 1012 aa17.37■□□□□ 0.37
PTBP1-201ENST00000349038 OLFM4Q6UX06 510 aa17.37■□□□□ 0.37
PTBP1-201ENST00000349038 LRRC31Q6UY01 552 aa17.37■□□□□ 0.37
PTBP1-201ENST00000349038 JPH2Q9BR39 696 aaPredicted RBP17.37■□□□□ 0.37
PTBP1-201ENST00000349038 SF3A3Q12874 501 aaKnown RBP eCLIP17.36■□□□□ 0.377e-8■■■□□ 19.1
PTBP1-201ENST00000349038 MRPL44Q9H9J2 332 aaKnown RBP17.36■□□□□ 0.37
PTBP1-201ENST00000349038 RCOR1Q9UKL0 485 aa17.36■□□□□ 0.37
PTBP1-201ENST00000349038 ERLIN1O75477 346 aa17.36■□□□□ 0.37
PTBP1-201ENST00000349038 PIP4K2AP48426 406 aaPredicted RBP17.36■□□□□ 0.37
PTBP1-201ENST00000349038 SLIT1O75093 1534 aa17.36■□□□□ 0.37
PTBP1-201ENST00000349038 SPTLC2O15270 562 aa17.36■□□□□ 0.37
PTBP1-201ENST00000349038 A1BGP04217 495 aa17.36■□□□□ 0.37
PTBP1-201ENST00000349038 SSBP05455 408 aaKnown RBP eCLIP17.36■□□□□ 0.37
PTBP1-201ENST00000349038 CYP21A2P08686 494 aa17.36■□□□□ 0.37
PTBP1-201ENST00000349038 CASP8Q14790 479 aa17.36■□□□□ 0.37
PTBP1-201ENST00000349038 CCDC82Q8N4S0 544 aa17.36■□□□□ 0.37
PTBP1-201ENST00000349038 HMG20BQ9P0W2 317 aa17.36■□□□□ 0.37
PTBP1-201ENST00000349038 MAP3K2Q9Y2U5 619 aa17.36■□□□□ 0.37
PTBP1-201ENST00000349038 ENC1O14682 589 aa17.35■□□□□ 0.37
PTBP1-201ENST00000349038 FOXN1O15353 648 aa17.35■□□□□ 0.37
PTBP1-201ENST00000349038 ERLIN2O94905 339 aa17.35■□□□□ 0.37
PTBP1-201ENST00000349038 HSPA2P54652 639 aa17.35■□□□□ 0.37
PTBP1-201ENST00000349038 NCAPH2Q6IBW4 605 aa17.35■□□□□ 0.37
PTBP1-201ENST00000349038 CXorf56Q9H5V9 222 aa17.35■□□□□ 0.37
PTBP1-201ENST00000349038 FMR1NBQ8N0W7 255 aaPredicted RBP17.35■□□□□ 0.37
PTBP1-201ENST00000349038 DBF4Q9UBU7 674 aaPredicted RBP17.35■□□□□ 0.37
PTBP1-201ENST00000349038 MRFAP1Q9Y605 127 aa17.35■□□□□ 0.37
PTBP1-201ENST00000349038 SYKP43405 635 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 NSUN7Q8NE18 718 aaKnown RBP17.34■□□□□ 0.37
PTBP1-201ENST00000349038 ENGASEQ8NFI3 743 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 RABGGTAQ92696 567 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms