RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 PLIN1O60240 522 aa12.21□□□□□ -0.45
MRPL55-204ENST00000348259 TAF5LO75529 589 aa12.21□□□□□ -0.45
MRPL55-204ENST00000348259 MS4A1P11836 297 aa12.21□□□□□ -0.45
MRPL55-204ENST00000348259 IREB2P48200 963 aaKnown RBP12.21□□□□□ -0.45
MRPL55-204ENST00000348259 LINS1Q8NG48 757 aa12.21□□□□□ -0.45
MRPL55-204ENST00000348259 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.45
MRPL55-204ENST00000348259 OTUD5Q96G74 571 aa12.21□□□□□ -0.45
MRPL55-204ENST00000348259 MPHOSPH8Q99549 860 aa12.21□□□□□ -0.45
MRPL55-204ENST00000348259 COLQQ9Y215 455 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-204ENST00000348259 FLIIQ13045 1269 aa12.2□□□□□ -0.46
MRPL55-204ENST00000348259 HELBQ8NG08 1087 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-204ENST00000348259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.2□□□□□ -0.463e-6■■■■□ 21.3
MRPL55-204ENST00000348259 TDRD7Q8NHU6 1098 aaKnown RBP12.2□□□□□ -0.46
MRPL55-204ENST00000348259 EXOC6Q8TAG9 804 aa12.2□□□□□ -0.46
MRPL55-204ENST00000348259 OPTNQ96CV9 577 aa12.2□□□□□ -0.46
MRPL55-204ENST00000348259 PTCH2Q9Y6C5 1203 aa12.2□□□□□ -0.46
MRPL55-204ENST00000348259 ANKRD18BA2A2Z9 1011 aa12.19□□□□□ -0.46
MRPL55-204ENST00000348259 F8W031 263 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-204ENST00000348259 VAMP4O75379 141 aa12.19□□□□□ -0.46
MRPL55-204ENST00000348259 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
MRPL55-204ENST00000348259 TWISTNBQ3B726 338 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-204ENST00000348259 EPHA10Q5JZY3 1008 aa12.19□□□□□ -0.46
MRPL55-204ENST00000348259 OTUD7BQ6GQQ9 843 aa12.19□□□□□ -0.46
MRPL55-204ENST00000348259 FAM43AQ8N2R8 423 aa12.19□□□□□ -0.46
MRPL55-204ENST00000348259 DNAAF4Q8WXU2 420 aa12.19□□□□□ -0.46
MRPL55-204ENST00000348259 STK31Q9BXU1 1019 aa12.19□□□□□ -0.46
MRPL55-204ENST00000348259 ELP3Q9H9T3 547 aa12.19□□□□□ -0.46
MRPL55-204ENST00000348259 VEZTQ9HBM0 779 aa12.19□□□□□ -0.46
MRPL55-204ENST00000348259 ZNF70Q9UC06 446 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-204ENST00000348259 SERPINA10Q9UK55 444 aa12.19□□□□□ -0.46
MRPL55-204ENST00000348259 MYO1BO43795 1136 aa12.18□□□□□ -0.46
MRPL55-204ENST00000348259 VGLL4Q14135 290 aa12.18□□□□□ -0.46
MRPL55-204ENST00000348259 ZNF804AQ7Z570 1209 aa12.18□□□□□ -0.46
MRPL55-204ENST00000348259 SHISA4Q96DD7 197 aa12.18□□□□□ -0.46
MRPL55-204ENST00000348259 PRO3102Q9H379 93 aa12.18□□□□□ -0.46
MRPL55-204ENST00000348259 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
MRPL55-204ENST00000348259 JAG2Q9Y219 1238 aa12.18□□□□□ -0.46
MRPL55-204ENST00000348259 MGAMO43451 1857 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 SPDYE5A6NIY4 337 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 IPO8O15397 1037 aaKnown RBP12.17□□□□□ -0.46
MRPL55-204ENST00000348259 KCNJ4P48050 445 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 TNFAIP1Q13829 316 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 GRIK5Q16478 980 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 BEND3Q5T5X7 828 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 C20orf194Q5TEA3 1177 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 UBE2Q1Q7Z7E8 422 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 SSH1Q8WYL5 1049 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 ARHGAP45Q92619 1136 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 CRBNQ96SW2 442 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 ARHGAP39Q9C0H5 1083 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 SNCAIPQ9Y6H5 919 aa12.17□□□□□ -0.46
MRPL55-204ENST00000348259 KIF16BQ96L93 1317 aa12.16□□□□□ -0.46
MRPL55-204ENST00000348259 ADGRA2Q96PE1 1338 aa12.16□□□□□ -0.46
MRPL55-204ENST00000348259 CCL15-CCL14A0A0B4J2E2 113 aa12.16□□□□□ -0.46
MRPL55-204ENST00000348259 TLR2O60603 784 aa12.16□□□□□ -0.46
MRPL55-204ENST00000348259 CTGFP29279 349 aa12.16□□□□□ -0.46
MRPL55-204ENST00000348259 MAP3K9P80192 1104 aa12.16□□□□□ -0.46
MRPL55-204ENST00000348259 IFIT5Q13325 482 aaKnown RBP12.16□□□□□ -0.46
MRPL55-204ENST00000348259 TAF1CQ15572 869 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-204ENST00000348259 CCL15Q16663 113 aa12.16□□□□□ -0.46
MRPL55-204ENST00000348259 SLC9C1Q4G0N8 1177 aa12.16□□□□□ -0.46
MRPL55-204ENST00000348259 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
MRPL55-204ENST00000348259 DZIP1LQ8IYY4 767 aaKnown RBP12.16□□□□□ -0.46
MRPL55-204ENST00000348259 ZNF594Q96JF6 807 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-204ENST00000348259 CCDC136Q96JN2 1154 aa12.16□□□□□ -0.46
MRPL55-204ENST00000348259 FAM84BQ96KN1 310 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-204ENST00000348259 TMEM39BQ9GZU3 492 aa12.16□□□□□ -0.46
MRPL55-204ENST00000348259 TDRD3Q9H7E2 651 aaKnown RBP12.16□□□□□ -0.46
MRPL55-204ENST00000348259 H0YGN5 161 aa12.15□□□□□ -0.46
MRPL55-204ENST00000348259 GTF2A2P52657 109 aa12.15□□□□□ -0.46
MRPL55-204ENST00000348259 UBE4AQ14139 1066 aa12.15□□□□□ -0.46
MRPL55-204ENST00000348259 MFSD14BQ5SR56 506 aa12.15□□□□□ -0.46
MRPL55-204ENST00000348259 KAZALD1Q96I82 304 aa12.15□□□□□ -0.46
MRPL55-204ENST00000348259 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
MRPL55-204ENST00000348259 ZFYVE28Q9HCC9 887 aa12.15□□□□□ -0.46
MRPL55-204ENST00000348259 SMC4Q9NTJ3 1288 aa12.15□□□□□ -0.46
MRPL55-204ENST00000348259 TTF2Q9UNY4 1162 aaKnown RBP12.15□□□□□ -0.46
MRPL55-204ENST00000348259 PTPRFP10586 1907 aa12.15□□□□□ -0.46
MRPL55-204ENST00000348259 ALPK3Q96L96 1907 aa12.15□□□□□ -0.46
MRPL55-204ENST00000348259 RPAP1Q9BWH6 1393 aaPredicted RBP12.15□□□□□ -0.46
MRPL55-204ENST00000348259 CUL9Q8IWT3 2517 aa12.14□□□□□ -0.47
MRPL55-204ENST00000348259 MYH13Q9UKX3 1938 aa12.14□□□□□ -0.47
MRPL55-204ENST00000348259 CRKP46108 304 aa12.14□□□□□ -0.47
MRPL55-204ENST00000348259 LACTBP83111 547 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-204ENST00000348259 HDLBPQ00341 1268 aaKnown RBP12.14□□□□□ -0.47
MRPL55-204ENST00000348259 FKBP5Q13451 457 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-204ENST00000348259 B4GALNT3Q6L9W6 998 aa12.14□□□□□ -0.47
MRPL55-204ENST00000348259 LMBR1LQ6UX01 489 aa12.14□□□□□ -0.47
MRPL55-204ENST00000348259 C17orf99Q6UX52 265 aa12.14□□□□□ -0.47
MRPL55-204ENST00000348259 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
MRPL55-204ENST00000348259 NBPF11Q86T75 865 aa12.14□□□□□ -0.47
MRPL55-204ENST00000348259 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-204ENST00000348259 BTBD19C9JJ37 291 aa12.13□□□□□ -0.47
MRPL55-204ENST00000348259 GYG1P46976 350 aa12.13□□□□□ -0.47
MRPL55-204ENST00000348259 MOGSQ13724 837 aa12.13□□□□□ -0.47
MRPL55-204ENST00000348259 FKBP1CQ5VVH2 108 aa12.13□□□□□ -0.47
MRPL55-204ENST00000348259 ATF7IPQ6VMQ6 1270 aa12.13□□□□□ -0.47
MRPL55-204ENST00000348259 LDHAL6AQ6ZMR3 332 aa12.13□□□□□ -0.47
MRPL55-204ENST00000348259 MRPL50Q8N5N7 158 aaKnown RBP12.13□□□□□ -0.47
MRPL55-204ENST00000348259 SH3TC2Q8TF17 1288 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 806.7 ms