RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 MYH2Q9UKX2 1941 aa22.95■■□□□ 1.26
CHMP4A-201ENST00000347519 FZD9O00144 591 aa22.95■■□□□ 1.26
CHMP4A-201ENST00000347519 LDHBP07195 334 aaKnown RBP22.95■■□□□ 1.26
CHMP4A-201ENST00000347519 ADGRA1Q86SQ6 560 aa22.95■■□□□ 1.26
CHMP4A-201ENST00000347519 ZGPATQ8N5A5 531 aaKnown RBP22.95■■□□□ 1.26
CHMP4A-201ENST00000347519 OSBP2Q969R2 916 aa22.95■■□□□ 1.26
CHMP4A-201ENST00000347519 ESYT1Q9BSJ8 1104 aa22.95■■□□□ 1.26
CHMP4A-201ENST00000347519 BACH2Q9BYV9 841 aa22.95■■□□□ 1.26
CHMP4A-201ENST00000347519 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.95■■□□□ 1.26
CHMP4A-201ENST00000347519 VIL1P09327 827 aaKnown RBP22.94■■□□□ 1.26
CHMP4A-201ENST00000347519 FKBP1AP62942 108 aaKnown RBP22.94■■□□□ 1.26
CHMP4A-201ENST00000347519 SPTY2D1Q68D10 685 aaPredicted RBP22.94■■□□□ 1.26
CHMP4A-201ENST00000347519 ZNF541Q9H0D2 1346 aa22.93■■□□□ 1.26
CHMP4A-201ENST00000347519 F8W031 263 aaPredicted RBP22.93■■□□□ 1.26
CHMP4A-201ENST00000347519 M0R2C6 588 aa22.93■■□□□ 1.26
CHMP4A-201ENST00000347519 HIP1O00291 1037 aa22.93■■□□□ 1.26
CHMP4A-201ENST00000347519 ZFYP08048 801 aaPredicted RBP22.93■■□□□ 1.26
CHMP4A-201ENST00000347519 UBE3CQ15386 1083 aa22.93■■□□□ 1.26
CHMP4A-201ENST00000347519 ZSCAN25Q6NSZ9 544 aa22.93■■□□□ 1.26
CHMP4A-201ENST00000347519 CCDC129Q6ZRS4 1044 aa22.93■■□□□ 1.26
CHMP4A-201ENST00000347519 PUS7LQ9H0K6 701 aaKnown RBP22.93■■□□□ 1.26
CHMP4A-201ENST00000347519 RNF181Q9P0P0 153 aa22.93■■□□□ 1.26
CHMP4A-201ENST00000347519 MAST3O60307 1309 aa22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 GRIN3BO60391 1043 aa22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 CYP7A1P22680 504 aa22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 DIXDC1Q155Q3 683 aa22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 C9orf131Q5VYM1 1079 aa22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 CIAPIN1Q6FI81 312 aa22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 NAA16Q6N069 864 aaPredicted RBP22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 RSBN1LQ6PCB5 846 aaPredicted RBP22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 ZNF589Q86UQ0 364 aaPredicted RBP22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 TICAM2Q86XR7 235 aa22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 DZIP1Q86YF9 867 aaKnown RBP22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 APPBP2Q92624 585 aa22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 GMLQ99445 158 aa22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 ZBTB12Q9Y330 459 aaPredicted RBP22.92■■□□□ 1.26
CHMP4A-201ENST00000347519 SGSM2O43147 1006 aa22.91■■□□□ 1.26
CHMP4A-201ENST00000347519 ZNF784Q8NCA9 323 aaPredicted RBP22.91■■□□□ 1.26
CHMP4A-201ENST00000347519 LRRFIP1Q32MZ4 808 aaKnown RBP22.9■■□□□ 1.26
CHMP4A-201ENST00000347519 KIAA0825Q8IV33 1275 aa22.9■■□□□ 1.26
CHMP4A-201ENST00000347519 HELLSQ9NRZ9 838 aa22.9■■□□□ 1.26
CHMP4A-201ENST00000347519 TTF2Q9UNY4 1162 aaKnown RBP22.9■■□□□ 1.26
CHMP4A-201ENST00000347519 SUGT1Q9Y2Z0 365 aa22.9■■□□□ 1.26
CHMP4A-201ENST00000347519 SCNN1DP51172 638 aa22.89■■□□□ 1.26
CHMP4A-201ENST00000347519 MCMDC2Q4G0Z9 681 aa22.89■■□□□ 1.26
CHMP4A-201ENST00000347519 CASC1Q6TDU7 716 aa22.89■■□□□ 1.26
CHMP4A-201ENST00000347519 EIF6P56537 245 aaKnown RBP22.89■■□□□ 1.25
CHMP4A-201ENST00000347519 MIGA1Q8NAN2 632 aa22.89■■□□□ 1.25
CHMP4A-201ENST00000347519 DYNLL1P63167 89 aaKnown RBP22.88■■□□□ 1.25
CHMP4A-201ENST00000347519 RUFY2Q8WXA3 655 aa22.88■■□□□ 1.25
CHMP4A-201ENST00000347519 PCDHAC2Q9Y5I4 1007 aa22.88■■□□□ 1.25
CHMP4A-201ENST00000347519 MROH7-TTC4A0A0A0MT08 1334 aa22.87■■□□□ 1.25
CHMP4A-201ENST00000347519 RAD50Q92878 1312 aa22.87■■□□□ 1.25
CHMP4A-201ENST00000347519 SHTN1A0MZ66 631 aa22.87■■□□□ 1.25
CHMP4A-201ENST00000347519 TNIP1Q15025 636 aa22.87■■□□□ 1.25
CHMP4A-201ENST00000347519 GJA3Q9Y6H8 435 aa22.87■■□□□ 1.25
CHMP4A-201ENST00000347519 GAKO14976 1311 aa22.86■■□□□ 1.25
CHMP4A-201ENST00000347519 GPAA1O43292 621 aa22.86■■□□□ 1.25
CHMP4A-201ENST00000347519 IGSF3O75054 1194 aa22.86■■□□□ 1.25
CHMP4A-201ENST00000347519 MBD4O95243 580 aa22.86■■□□□ 1.25
CHMP4A-201ENST00000347519 MFAP1P55081 439 aaKnown RBP22.86■■□□□ 1.25
CHMP4A-201ENST00000347519 GSTO1P78417 241 aa22.86■■□□□ 1.25
CHMP4A-201ENST00000347519 LCORLQ8N3X6 602 aa22.86■■□□□ 1.25
CHMP4A-201ENST00000347519 RIOK1Q9BRS2 568 aaKnown RBP22.86■■□□□ 1.25
CHMP4A-201ENST00000347519 ARMT1Q9H993 441 aa22.86■■□□□ 1.25
CHMP4A-201ENST00000347519 DAGLAQ9Y4D2 1042 aa22.86■■□□□ 1.25
CHMP4A-201ENST00000347519 CCDC171Q6TFL3 1326 aa22.85■■□□□ 1.25
CHMP4A-201ENST00000347519 MYO3BQ8WXR4 1341 aa22.85■■□□□ 1.25
CHMP4A-201ENST00000347519 PTH1RQ03431 593 aa22.85■■□□□ 1.25
CHMP4A-201ENST00000347519 VPS53Q5VIR6 699 aa22.85■■□□□ 1.25
CHMP4A-201ENST00000347519 AGBL3Q8NEM8 1001 aa22.85■■□□□ 1.25
CHMP4A-201ENST00000347519 FAM163AQ96GL9 167 aaPredicted RBP22.85■■□□□ 1.25
CHMP4A-201ENST00000347519 STRBPQ96SI9 672 aaKnown RBP22.85■■□□□ 1.25
CHMP4A-201ENST00000347519 LSG1Q9H089 658 aaKnown RBP22.85■■□□□ 1.25
CHMP4A-201ENST00000347519 MAGEB6P1A0A0J9YX57 407 aa22.84■■□□□ 1.25
CHMP4A-201ENST00000347519 FOXP2O15409 715 aa22.84■■□□□ 1.25
CHMP4A-201ENST00000347519 CRKP46108 304 aa22.84■■□□□ 1.25
CHMP4A-201ENST00000347519 GMPSP49915 693 aaPredicted RBP22.84■■□□□ 1.25
CHMP4A-201ENST00000347519 AATFQ9NY61 560 aaKnown RBP eCLIP22.84■■□□□ 1.25
CHMP4A-201ENST00000347519 CDK5RAP2Q96SN8 1893 aa22.84■■□□□ 1.25
CHMP4A-201ENST00000347519 LDHCP07864 332 aa22.83■■□□□ 1.25
CHMP4A-201ENST00000347519 ANO2Q9NQ90 1003 aa22.83■■□□□ 1.25
CHMP4A-201ENST00000347519 GPR75-ASB3A0A0A6YYF3 556 aa22.82■■□□□ 1.24
CHMP4A-201ENST00000347519 PRKAB2O43741 272 aa22.82■■□□□ 1.24
CHMP4A-201ENST00000347519 BTDP43251 543 aa22.82■■□□□ 1.24
CHMP4A-201ENST00000347519 TMED8Q6PL24 325 aaPredicted RBP22.82■■□□□ 1.24
CHMP4A-201ENST00000347519 HHIPL2Q6UWX4 724 aa22.82■■□□□ 1.24
CHMP4A-201ENST00000347519 AIDAQ96BJ3 306 aa22.82■■□□□ 1.24
CHMP4A-201ENST00000347519 DDNO94850 711 aaPredicted RBP22.81■■□□□ 1.24
CHMP4A-201ENST00000347519 PPP4CP60510 307 aa22.81■■□□□ 1.24
CHMP4A-201ENST00000347519 HDLBPQ00341 1268 aaKnown RBP22.81■■□□□ 1.24
CHMP4A-201ENST00000347519 APOBEC3HQ6NTF7 200 aaKnown RBP22.81■■□□□ 1.24
CHMP4A-201ENST00000347519 SH3RF3Q8TEJ3 882 aaPredicted RBP22.81■■□□□ 1.24
CHMP4A-201ENST00000347519 TEKT1Q969V4 418 aa22.81■■□□□ 1.24
CHMP4A-201ENST00000347519 MRIQ9BWK5 157 aa22.81■■□□□ 1.24
CHMP4A-201ENST00000347519 ECM29Q5VYK3 1845 aa22.8■■□□□ 1.24
CHMP4A-201ENST00000347519 USP17L8P0C7I0 530 aa22.8■■□□□ 1.24
CHMP4A-201ENST00000347519 CFAP100Q494V2 611 aa22.8■■□□□ 1.24
CHMP4A-201ENST00000347519 SLF2Q8IX21 1173 aa22.8■■□□□ 1.24
CHMP4A-201ENST00000347519 USP26Q9BXU7 913 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms