RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 UBN2Q6ZU65 1347 aa10.1□□□□□ -0.79
SKAP2-201ENST00000345317 ADAMTSL3P82987 1691 aa10.1□□□□□ -0.79
SKAP2-201ENST00000345317 CIAO1O76071 339 aa10.09□□□□□ -0.79
SKAP2-201ENST00000345317 XBP1P17861 261 aa10.09□□□□□ -0.79
SKAP2-201ENST00000345317 NECTIN1Q15223 517 aa10.09□□□□□ -0.79
SKAP2-201ENST00000345317 MTERF4Q7Z6M4 381 aaKnown RBP10.09□□□□□ -0.79
SKAP2-201ENST00000345317 INTS4Q96HW7 963 aaKnown RBP10.09□□□□□ -0.79
SKAP2-201ENST00000345317 CYP2E1P05181 493 aaPredicted RBP10.09□□□□□ -0.79
SKAP2-201ENST00000345317 LDHBP07195 334 aaKnown RBP10.09□□□□□ -0.79
SKAP2-201ENST00000345317 MARCKSP29966 332 aaPredicted RBP10.09□□□□□ -0.79
SKAP2-201ENST00000345317 HMGN5P82970 282 aaKnown RBP10.09□□□□□ -0.79
SKAP2-201ENST00000345317 ZMYM1Q5SVZ6 1142 aa10.09□□□□□ -0.79
SKAP2-201ENST00000345317 HOMER1Q86YM7 354 aa10.09□□□□□ -0.79
SKAP2-201ENST00000345317 CRNKL1Q9BZJ0 848 aaKnown RBP10.09□□□□□ -0.79
SKAP2-201ENST00000345317 CYP2D7A0A087X1C5 515 aa10.09□□□□□ -0.79
SKAP2-201ENST00000345317 BIN1O00499 593 aa10.09□□□□□ -0.79
SKAP2-201ENST00000345317 CDKL5O76039 1030 aa10.09□□□□□ -0.79
SKAP2-201ENST00000345317 DYNLL1P63167 89 aaKnown RBP10.09□□□□□ -0.79
SKAP2-201ENST00000345317 ALG1Q9BT22 464 aa10.09□□□□□ -0.79
SKAP2-201ENST00000345317 PARP3Q9Y6F1 533 aa10.09□□□□□ -0.79
SKAP2-201ENST00000345317 JCADQ9P266 1359 aa10.09□□□□□ -0.79
SKAP2-201ENST00000345317 UQCRHLA0A096LP55 91 aa10.08□□□□□ -0.8
SKAP2-201ENST00000345317 UQCRHP07919 91 aa10.08□□□□□ -0.8
SKAP2-201ENST00000345317 INTS5Q6P9B9 1019 aaKnown RBP10.08□□□□□ -0.8
SKAP2-201ENST00000345317 RNF41Q9H4P4 317 aaPredicted RBP10.08□□□□□ -0.8
SKAP2-201ENST00000345317 ADD1P35611 737 aaKnown RBP10.08□□□□□ -0.8
SKAP2-201ENST00000345317 DOK7Q18PE1 504 aa10.08□□□□□ -0.8
SKAP2-201ENST00000345317 PDILTQ8N807 584 aa10.08□□□□□ -0.8
SKAP2-201ENST00000345317 LTN1O94822 1766 aa10.08□□□□□ -0.8
SKAP2-201ENST00000345317 WTIPA6NIX2 430 aaPredicted RBP10.08□□□□□ -0.8
SKAP2-201ENST00000345317 CAMTA2O94983 1202 aa10.08□□□□□ -0.8
SKAP2-201ENST00000345317 SERPINB2P05120 415 aa10.08□□□□□ -0.8
SKAP2-201ENST00000345317 FAM47AQ5JRC9 791 aa10.08□□□□□ -0.8
SKAP2-201ENST00000345317 CRACR2BQ8N4Y2 399 aaPredicted RBP10.08□□□□□ -0.8
SKAP2-201ENST00000345317 CTCFLQ8NI51 663 aaPredicted RBP10.08□□□□□ -0.8
SKAP2-201ENST00000345317 RPS6KA4O75676 772 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 BAG3O95817 575 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 EIF6P56537 245 aaKnown RBP10.07□□□□□ -0.8
SKAP2-201ENST00000345317 SSRP1Q08945 709 aaKnown RBP10.07□□□□□ -0.8
SKAP2-201ENST00000345317 VPS72Q15906 364 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 IFIT1BQ5T764 474 aaKnown RBP10.07□□□□□ -0.8
SKAP2-201ENST00000345317 TRIM5Q9C035 493 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 ANKRD2Q9GZV1 360 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 SCAND2PQ9GZW5 306 aaPredicted RBP10.07□□□□□ -0.8
SKAP2-201ENST00000345317 BRMS1Q9HCU9 246 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 DENND2AQ9ULE3 1009 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 USP17L12C9JPN9 530 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 USP17L21D6R901 530 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 ZNF804AQ7Z570 1209 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 CATIPQ7Z7H3 387 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 MAPKAPK5Q8IW41 473 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 ESR2Q92731 530 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 RIPOR2Q9Y4F9 1068 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 IFNL3Q8IZI9 196 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 FSIP1Q8NA03 581 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 DACT1Q9NYF0 836 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 MED1Q15648 1581 aaPredicted RBP10.07□□□□□ -0.8
SKAP2-201ENST00000345317 BRD1O95696 1058 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 GTF2IP78347 998 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 TRIM28Q13263 835 aaKnown RBP10.07□□□□□ -0.8
SKAP2-201ENST00000345317 LCORLQ8N3X6 602 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 DSCC1Q9BVC3 393 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 GPR108Q9NPR9 543 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 GJB4Q9NTQ9 266 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 USP25Q9UHP3 1055 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 GGA1Q9UJY5 639 aa10.07□□□□□ -0.8
SKAP2-201ENST00000345317 CCDC192P0DO97 292 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 MAPK8IP2Q13387 824 aaPredicted RBP10.06□□□□□ -0.8
SKAP2-201ENST00000345317 RTN1Q16799 776 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 LMBRD1Q9NUN5 540 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 ZNF804BA4D1E1 1349 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 UTYO14607 1347 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 GOLGA6L6A8MZA4 724 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 PDE4BQ07343 736 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 DIXDC1Q155Q3 683 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 ZSCAN30Q86W11 494 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 ZNF34Q8IZ26 560 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 ERCC4Q92889 916 aaPredicted RBP10.06□□□□□ -0.8
SKAP2-201ENST00000345317 TM6SF1Q9BZW5 370 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 SALL3Q9BXA9 1300 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 UBE2HP62256 183 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 MAP3K11Q16584 847 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 TPD52L1Q16890 204 aaPredicted RBP10.06□□□□□ -0.8
SKAP2-201ENST00000345317 SPTY2D1Q68D10 685 aaPredicted RBP10.06□□□□□ -0.8
SKAP2-201ENST00000345317 KRT23Q9C075 422 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 NARFQ9UHQ1 456 aa10.06□□□□□ -0.8
SKAP2-201ENST00000345317 TSPY3P0CV98 308 aa10.05□□□□□ -0.8
SKAP2-201ENST00000345317 TSPY8P0CW00 308 aa10.05□□□□□ -0.8
SKAP2-201ENST00000345317 SCNN1DP51172 638 aa10.05□□□□□ -0.8
SKAP2-201ENST00000345317 SCRN1Q12765 414 aa10.05□□□□□ -0.8
SKAP2-201ENST00000345317 TGFBRAP1Q8WUH2 860 aa10.05□□□□□ -0.8
SKAP2-201ENST00000345317 RBM17Q96I25 401 aaKnown RBP10.05□□□□□ -0.8
SKAP2-201ENST00000345317 ANGEL1Q9UNK9 670 aaKnown RBP10.05□□□□□ -0.8
SKAP2-201ENST00000345317 MINPP1Q9UNW1 487 aa10.05□□□□□ -0.8
SKAP2-201ENST00000345317 LDHCP07864 332 aa10.05□□□□□ -0.8
SKAP2-201ENST00000345317 ADD2P35612 726 aa10.05□□□□□ -0.8
SKAP2-201ENST00000345317 CASP7P55210 303 aa10.05□□□□□ -0.8
SKAP2-201ENST00000345317 NFIXQ14938 502 aa10.05□□□□□ -0.8
SKAP2-201ENST00000345317 CCDC183Q5T5S1 534 aa10.05□□□□□ -0.8
SKAP2-201ENST00000345317 CCAR1Q8IX12 1150 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms