RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 PARP3Q9Y6F1 533 aa29.89■■■□□ 2.37
TRADD-201ENST00000345057 WDR19Q8NEZ3 1342 aa29.88■■■□□ 2.37
TRADD-201ENST00000345057 IRS2Q9Y4H2 1338 aa29.88■■■□□ 2.37
TRADD-201ENST00000345057 ZNF804AQ7Z570 1209 aa29.88■■■□□ 2.37
TRADD-201ENST00000345057 KLRK1P26718 216 aa29.87■■■□□ 2.37
TRADD-201ENST00000345057 ZDHHC9Q9Y397 364 aa29.87■■■□□ 2.37
TRADD-201ENST00000345057 SKOR2Q2VWA4 1001 aaPredicted RBP29.87■■■□□ 2.37
TRADD-201ENST00000345057 SPTY2D1Q68D10 685 aaPredicted RBP29.87■■■□□ 2.37
TRADD-201ENST00000345057 NAPBQ9H115 298 aa29.87■■■□□ 2.37
TRADD-201ENST00000345057 MCM5P33992 734 aa29.86■■■□□ 2.37
TRADD-201ENST00000345057 HAND2P61296 217 aa29.86■■■□□ 2.37
TRADD-201ENST00000345057 COL9A3Q14050 684 aaPredicted RBP29.86■■■□□ 2.37
TRADD-201ENST00000345057 ARMT1Q9H993 441 aa29.86■■■□□ 2.37
TRADD-201ENST00000345057 PDE6BP35913 854 aa29.85■■■□□ 2.37
TRADD-201ENST00000345057 IFNL3Q8IZI9 196 aa29.85■■■□□ 2.37
TRADD-201ENST00000345057 BRF1Q92994 677 aa29.85■■■□□ 2.37
TRADD-201ENST00000345057 PODXL2Q9NZ53 605 aa29.85■■■□□ 2.37
TRADD-201ENST00000345057 NAA16Q6N069 864 aaPredicted RBP29.85■■■□□ 2.37
TRADD-201ENST00000345057 GGA1Q9UJY5 639 aa29.85■■■□□ 2.37
TRADD-201ENST00000345057 MAGEB6P1A0A0J9YX57 407 aa29.84■■■□□ 2.37
TRADD-201ENST00000345057 PDCP20941 246 aa29.84■■■□□ 2.37
TRADD-201ENST00000345057 GJB2P29033 226 aa29.84■■■□□ 2.37
TRADD-201ENST00000345057 WDR66Q8TBY9 1149 aa29.84■■■□□ 2.37
TRADD-201ENST00000345057 GTF3C6Q969F1 213 aa29.84■■■□□ 2.37
TRADD-201ENST00000345057 SLC4A4Q9Y6R1 1079 aa29.84■■■□□ 2.37
TRADD-201ENST00000345057 SALL1Q9NSC2 1324 aa29.84■■■□□ 2.37
TRADD-201ENST00000345057 A0A0G2JLW4 131 aa29.83■■■□□ 2.37
TRADD-201ENST00000345057 NECAB1Q8N987 351 aa29.83■■■□□ 2.37
TRADD-201ENST00000345057 NSFL1CQ9UNZ2 370 aaKnown RBP29.83■■■□□ 2.37
TRADD-201ENST00000345057 MMP10P09238 476 aa29.82■■■□□ 2.37
TRADD-201ENST00000345057 GPSM2P81274 684 aa29.82■■■□□ 2.37
TRADD-201ENST00000345057 LCORLQ8N3X6 602 aa29.82■■■□□ 2.37
TRADD-201ENST00000345057 TRAK2O60296 914 aa29.82■■■□□ 2.36
TRADD-201ENST00000345057 NPR1P16066 1061 aa29.82■■■□□ 2.36
TRADD-201ENST00000345057 CCDC125Q86Z20 511 aa29.82■■■□□ 2.36
TRADD-201ENST00000345057 MB21D2Q8IYB1 491 aaPredicted RBP29.82■■■□□ 2.36
TRADD-201ENST00000345057 MAST2Q6P0Q8 1798 aa29.82■■■□□ 2.36
TRADD-201ENST00000345057 GSG1L2A8MUP6 293 aa29.81■■■□□ 2.36
TRADD-201ENST00000345057 STX6O43752 255 aa29.81■■■□□ 2.36
TRADD-201ENST00000345057 ALDH1B1P30837 517 aa29.81■■■□□ 2.36
TRADD-201ENST00000345057 ST3GAL1Q11201 340 aa29.81■■■□□ 2.36
TRADD-201ENST00000345057 SF3B2Q13435 895 aaKnown RBP29.81■■■□□ 2.36
TRADD-201ENST00000345057 SP8Q8IXZ3 490 aa29.81■■■□□ 2.36
TRADD-201ENST00000345057 TDRD7Q8NHU6 1098 aaKnown RBP29.81■■■□□ 2.36
TRADD-201ENST00000345057 ZNF274Q96GC6 653 aaPredicted RBP29.81■■■□□ 2.36
TRADD-201ENST00000345057 CAMKK2Q96RR4 588 aa29.81■■■□□ 2.36
TRADD-201ENST00000345057 STK32BQ9NY57 414 aa29.81■■■□□ 2.36
TRADD-201ENST00000345057 CACNA1SQ13698 1873 aa29.81■■■□□ 2.36
TRADD-201ENST00000345057 DUOX1Q9NRD9 1551 aa29.81■■■□□ 2.36
TRADD-201ENST00000345057 LRRC37AA6NMS7 1700 aa29.8■■■□□ 2.36
TRADD-201ENST00000345057 PPEF1O14829 653 aaPredicted RBP29.8■■■□□ 2.36
TRADD-201ENST00000345057 UFL1O94874 794 aa29.8■■■□□ 2.36
TRADD-201ENST00000345057 TDO2P48775 406 aa29.8■■■□□ 2.36
TRADD-201ENST00000345057 TXNRD3Q86VQ6 643 aa29.8■■■□□ 2.36
TRADD-201ENST00000345057 LLPHQ9BRT6 129 aaKnown RBP29.8■■■□□ 2.36
TRADD-201ENST00000345057 PFKFB2O60825 505 aa29.8■■■□□ 2.36
TRADD-201ENST00000345057 SYT1P21579 422 aa29.8■■■□□ 2.36
TRADD-201ENST00000345057 SLC15A2Q16348 729 aa29.8■■■□□ 2.36
TRADD-201ENST00000345057 MIGA1Q8NAN2 632 aa29.8■■■□□ 2.36
TRADD-201ENST00000345057 NSUN4Q96CB9 384 aaKnown RBP29.8■■■□□ 2.36
TRADD-201ENST00000345057 CNNM2Q9H8M5 875 aa29.8■■■□□ 2.36
TRADD-201ENST00000345057 ATP6V1DQ9Y5K8 247 aa29.8■■■□□ 2.36
TRADD-201ENST00000345057 ANKRD31Q8N7Z5 1873 aa29.8■■■□□ 2.36
TRADD-201ENST00000345057 CHAF1AQ13111 956 aaPredicted RBP29.79■■■□□ 2.36
TRADD-201ENST00000345057 GSE1Q14687 1217 aa29.79■■■□□ 2.36
TRADD-201ENST00000345057 EPB41L4AQ9HCS5 686 aaPredicted RBP29.79■■■□□ 2.36
TRADD-201ENST00000345057 PRC1O43663 620 aa29.78■■■□□ 2.36
TRADD-201ENST00000345057 SRGNP10124 158 aa29.78■■■□□ 2.36
TRADD-201ENST00000345057 EVCP57679 992 aa29.78■■■□□ 2.36
TRADD-201ENST00000345057 LRRC2Q9BYS8 371 aa29.78■■■□□ 2.36
TRADD-201ENST00000345057 ZSCAN22P10073 491 aaPredicted RBP29.78■■■□□ 2.36
TRADD-201ENST00000345057 STK3Q13188 491 aa29.78■■■□□ 2.36
TRADD-201ENST00000345057 MCTP1Q6DN14 999 aa29.78■■■□□ 2.36
TRADD-201ENST00000345057 RIOK1Q9BRS2 568 aaKnown RBP29.78■■■□□ 2.36
TRADD-201ENST00000345057 TMX4Q9H1E5 349 aaPredicted RBP29.78■■■□□ 2.36
TRADD-201ENST00000345057 QSER1Q2KHR3 1735 aa29.77■■■□□ 2.36
TRADD-201ENST00000345057 ATP6V0A2Q9Y487 856 aa29.77■■■□□ 2.36
TRADD-201ENST00000345057 TIAM2Q8IVF5 1701 aa29.76■■■□□ 2.36
TRADD-201ENST00000345057 MECOMQ03112 1051 aa29.76■■■□□ 2.36
TRADD-201ENST00000345057 EZH2Q15910 746 aaKnown RBP29.76■■■□□ 2.36
TRADD-201ENST00000345057 GIMAP6Q6P9H5 292 aa29.76■■■□□ 2.36
TRADD-201ENST00000345057 TBC1D10CQ8IV04 446 aa29.76■■■□□ 2.36
TRADD-201ENST00000345057 RNF41Q9H4P4 317 aaPredicted RBP29.76■■■□□ 2.36
TRADD-201ENST00000345057 KIF3AQ9Y496 699 aa29.76■■■□□ 2.36
TRADD-201ENST00000345057 CCDC88AQ3V6T2 1871 aa29.76■■■□□ 2.35
TRADD-201ENST00000345057 DEFB132Q7Z7B7 95 aa29.76■■■□□ 2.35
TRADD-201ENST00000345057 ADGRA1Q86SQ6 560 aa29.76■■■□□ 2.35
TRADD-201ENST00000345057 MASTLQ96GX5 879 aa29.76■■■□□ 2.35
TRADD-201ENST00000345057 KRT23Q9C075 422 aa29.76■■■□□ 2.35
TRADD-201ENST00000345057 NBPF3Q9H094 633 aa29.76■■■□□ 2.35
TRADD-201ENST00000345057 EN1Q05925 392 aaPredicted RBP29.75■■■□□ 2.35
TRADD-201ENST00000345057 APOBRQ0VD83 1088 aa29.75■■■□□ 2.35
TRADD-201ENST00000345057 DZIP1Q86YF9 867 aaKnown RBP29.75■■■□□ 2.35
TRADD-201ENST00000345057 GSTO1P78417 241 aa29.74■■■□□ 2.35
TRADD-201ENST00000345057 TBC1D16Q8TBP0 767 aa29.74■■■□□ 2.35
TRADD-201ENST00000345057 PRKAB2O43741 272 aa29.74■■■□□ 2.35
TRADD-201ENST00000345057 IL1R1P14778 569 aa29.74■■■□□ 2.35
TRADD-201ENST00000345057 AKNAD1Q5T1N1 836 aa29.74■■■□□ 2.35
TRADD-201ENST00000345057 LARP1BQ659C4 914 aaKnown RBP29.74■■■□□ 2.35
TRADD-201ENST00000345057 TMEM87BQ96K49 555 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms