RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 FSTL1Q12841 308 aa5.64□□□□□ -1.51
VAV3-201ENST00000343258 RSBN1LQ6PCB5 846 aaPredicted RBP5.64□□□□□ -1.51
VAV3-201ENST00000343258 PODNQ7Z5L7 613 aa5.64□□□□□ -1.51
VAV3-201ENST00000343258 MTERF4Q7Z6M4 381 aaKnown RBP5.64□□□□□ -1.51
VAV3-201ENST00000343258 CNTROBQ8N137 903 aa5.64□□□□□ -1.51
VAV3-201ENST00000343258 DNAJC5GQ8N7S2 189 aa5.64□□□□□ -1.51
VAV3-201ENST00000343258 FAM84BQ96KN1 310 aaPredicted RBP5.64□□□□□ -1.51
VAV3-201ENST00000343258 GLIS2Q9BZE0 524 aaPredicted RBP5.64□□□□□ -1.51
VAV3-201ENST00000343258 GZF1Q9H116 711 aaPredicted RBP5.64□□□□□ -1.51
VAV3-201ENST00000343258 ADARB2Q9NS39 739 aaKnown RBP5.64□□□□□ -1.51
VAV3-201ENST00000343258 USP17L3A6NCW0 530 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 USP17L4A6NCW7 530 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 F8W031 263 aaPredicted RBP5.63□□□□□ -1.51
VAV3-201ENST00000343258 EYA2O00167 538 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 ZBTB7BO15156 539 aaPredicted RBP5.63□□□□□ -1.51
VAV3-201ENST00000343258 LETM1O95202 739 aaPredicted RBP5.63□□□□□ -1.51
VAV3-201ENST00000343258 PDE8BO95263 885 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 BCAMP50895 628 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 TTLL5Q6EMB2 1281 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 USP17L1Q7RTZ2 530 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 KIAA0825Q8IV33 1275 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 FAM212AQ96EL1 285 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 COA1Q9GZY4 146 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 HDAC5Q9UQL6 1122 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 COG6Q9Y2V7 657 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 PASKQ96RG2 1323 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 ADAMTSL1Q8N6G6 1762 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 GNAI2P04899 355 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 GNAI3P08754 354 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 ADORA1P30542 326 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 NBPF9Q3BBW0 867 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 PNMA8AQ86V59 439 aaPredicted RBP5.63□□□□□ -1.51
VAV3-201ENST00000343258 DPF2Q92785 391 aa5.63□□□□□ -1.51
VAV3-201ENST00000343258 GTPBP4Q9BZE4 634 aaKnown RBP5.63□□□□□ -1.51
VAV3-201ENST00000343258 CGNQ9P2M7 1197 aaKnown RBP5.63□□□□□ -1.51
VAV3-201ENST00000343258 PATL2C9JE40 543 aaKnown RBP5.62□□□□□ -1.51
VAV3-201ENST00000343258 ADM5C9JUS6 153 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 SASH1O94885 1247 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 FGFR2P21802 821 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 APLP1P51693 650 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 TIMM10P62072 90 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 UBE4AQ14139 1066 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 PRAMEF18Q5VWM3 479 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 CST9Q5W186 159 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 C15orf52Q6ZUT6 534 aaKnown RBP5.62□□□□□ -1.51
VAV3-201ENST00000343258 USP50Q70EL3 339 aaPredicted RBP5.62□□□□□ -1.51
VAV3-201ENST00000343258 SCN4AP35499 1836 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 A0A1B0GUL6 1792 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 MROH5Q6ZUA9 1318 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 FSD2A1L4K1 749 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 H7C1D1 291 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 USP17L8P0C7I0 530 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 IL1R1P14778 569 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 HIBADHP31937 336 aaKnown RBP5.62□□□□□ -1.51
VAV3-201ENST00000343258 ZNF280AP59817 542 aaPredicted RBP5.62□□□□□ -1.51
VAV3-201ENST00000343258 TFCP2Q12800 502 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 CHAF1AQ13111 956 aaPredicted RBP5.62□□□□□ -1.51
VAV3-201ENST00000343258 MTX1Q13505 466 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 KIF4BQ2VIQ3 1234 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 STRIP1Q5VSL9 837 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 TAF3Q5VWG9 929 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 FBXO33Q7Z6M2 555 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 USP48Q86UV5 1035 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 COPRSQ9NQ92 184 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 GGA3Q9NZ52 723 aa5.62□□□□□ -1.51
VAV3-201ENST00000343258 MKRN1Q9UHC7 482 aaKnown RBP5.62□□□□□ -1.51
VAV3-201ENST00000343258 R3HCC1Q9Y3T6 440 aaKnown RBP5.62□□□□□ -1.51
VAV3-201ENST00000343258 COL1A1P02452 1464 aaPredicted RBP5.62□□□□□ -1.51
VAV3-201ENST00000343258 RPS12P25398 132 aaKnown RBP5.61□□□□□ -1.51
VAV3-201ENST00000343258 MRE11P49959 708 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 SCARF1Q14162 830 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 ANGEL2Q5VTE6 544 aaKnown RBP5.61□□□□□ -1.51
VAV3-201ENST00000343258 ZNF804AQ7Z570 1209 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 SIRT2Q8IXJ6 389 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 AGBL3Q8NEM8 1001 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 TDRD7Q8NHU6 1098 aaKnown RBP5.61□□□□□ -1.51
VAV3-201ENST00000343258 CCDC94Q9BW85 323 aaPredicted RBP5.61□□□□□ -1.51
VAV3-201ENST00000343258 ZNF408Q9H9D4 720 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 MYOZ2Q9NPC6 264 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 CENPFP49454 3210 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 ZNF646O15015 1829 aaPredicted RBP5.61□□□□□ -1.51
VAV3-201ENST00000343258 OFD1O75665 1012 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 PHKA1P46020 1223 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 RRP1P56182 461 aaKnown RBP5.61□□□□□ -1.51
VAV3-201ENST00000343258 FAM193AP78312 1265 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 PUM3Q15397 648 aaKnown RBP5.61□□□□□ -1.51
VAV3-201ENST00000343258 ATP2B3Q16720 1220 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 PI16Q6UXB8 463 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.61□□□□□ -1.51
VAV3-201ENST00000343258 PGAP2Q9UHJ9 254 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 UQCRHLA0A096LP55 91 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 WNT10BO00744 389 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 CLGNO14967 610 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 CIAO1O76071 339 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 UQCRHP07919 91 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 IL15P40933 162 aaPredicted RBP5.61□□□□□ -1.51
VAV3-201ENST00000343258 TERF1P54274 439 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 CBX1P83916 185 aa5.61□□□□□ -1.51
VAV3-201ENST00000343258 MVPQ14764 893 aaKnown RBP5.61□□□□□ -1.51
VAV3-201ENST00000343258 MFSD14BQ5SR56 506 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms