RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 RABGGTAQ92696 567 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 BPIFA3Q9BQP9 254 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 RABEP2Q9H5N1 569 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 SETD1AO15047 1707 aaKnown RBP17.09■□□□□ 0.33
CLCN1-201ENST00000343257 A0A1W2PQ27 194 aa17.09■□□□□ 0.33
CLCN1-201ENST00000343257 A0A1W2PQ64 194 aa17.09■□□□□ 0.33
CLCN1-201ENST00000343257 A0A1W2PQD8 194 aa17.09■□□□□ 0.33
CLCN1-201ENST00000343257 CDC27P30260 824 aa17.09■□□□□ 0.33
CLCN1-201ENST00000343257 ZNF530Q6P9A1 599 aaPredicted RBP17.09■□□□□ 0.33
CLCN1-201ENST00000343257 OLFM4Q6UX06 510 aa17.09■□□□□ 0.33
CLCN1-201ENST00000343257 DIP2CQ9Y2E4 1556 aa17.09■□□□□ 0.33
CLCN1-201ENST00000343257 SOWAHDA6NJG2 315 aa17.09■□□□□ 0.33
CLCN1-201ENST00000343257 TTC31Q49AM3 519 aaPredicted RBP17.09■□□□□ 0.33
CLCN1-201ENST00000343257 USP31Q70CQ4 1352 aa17.08■□□□□ 0.33
CLCN1-201ENST00000343257 CPLX1O14810 134 aa17.08■□□□□ 0.33
CLCN1-201ENST00000343257 TNNI3KQ59H18 835 aa17.08■□□□□ 0.33
CLCN1-201ENST00000343257 ANO1Q5XXA6 986 aa17.08■□□□□ 0.33
CLCN1-201ENST00000343257 KIFC2Q96AC6 838 aa17.08■□□□□ 0.33
CLCN1-201ENST00000343257 LRRC59Q96AG4 307 aaKnown RBP17.08■□□□□ 0.33
CLCN1-201ENST00000343257 FPGT-TNNI3KV9GXZ4 949 aa17.08■□□□□ 0.33
CLCN1-201ENST00000343257 ICE2Q659A1 982 aa17.08■□□□□ 0.32
CLCN1-201ENST00000343257 GDAP1L1Q96MZ0 367 aa17.08■□□□□ 0.32
CLCN1-201ENST00000343257 MYD88Q99836 296 aa17.08■□□□□ 0.32
CLCN1-201ENST00000343257 MON2Q7Z3U7 1717 aa17.08■□□□□ 0.32
CLCN1-201ENST00000343257 EIF3CLB5ME19 914 aaKnown RBP17.08■□□□□ 0.32
CLCN1-201ENST00000343257 ABTB2Q8N961 1025 aa17.08■□□□□ 0.32
CLCN1-201ENST00000343257 EIF3CQ99613 913 aaKnown RBP17.08■□□□□ 0.32
CLCN1-201ENST00000343257 AXDND1Q5T1B0 1012 aaPredicted RBP17.07■□□□□ 0.32
CLCN1-201ENST00000343257 KLF18A0A0U1RQI7 1052 aa17.07■□□□□ 0.32
CLCN1-201ENST00000343257 GOLGA8BA8MQT2 603 aa17.07■□□□□ 0.32
CLCN1-201ENST00000343257 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
CLCN1-201ENST00000343257 RGS22Q8NE09 1264 aa17.07■□□□□ 0.32
CLCN1-201ENST00000343257 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
CLCN1-201ENST00000343257 ANKZF1Q9H8Y5 726 aa17.07■□□□□ 0.32
CLCN1-201ENST00000343257 RIMBP3CA6NJZ7 1639 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 RIMBP3BA6NNM3 1639 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 RIMBP3Q9UFD9 1639 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 IGKV5-2P06315 115 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 EXOSC10Q01780 885 aaKnown RBP17.06■□□□□ 0.32
CLCN1-201ENST00000343257 ZNF569Q5MCW4 686 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 JRKLQ9Y4A0 524 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 PCDHA5Q9Y5H7 936 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 A0A1B0GUL7 405 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 IKBKBO14920 756 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 ATP5JP18859 108 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 NOM1Q5C9Z4 860 aaKnown RBP17.06■□□□□ 0.32
CLCN1-201ENST00000343257 ATL3Q6DD88 541 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 FOXP4Q8IVH2 680 aaPredicted RBP17.06■□□□□ 0.32
CLCN1-201ENST00000343257 TC2NQ8N9U0 490 aa17.06■□□□□ 0.32
CLCN1-201ENST00000343257 CCDC151A5D8V7 595 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 TIMM10P62072 90 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 LONRF3Q496Y0 759 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 BEND6Q5SZJ8 279 aaPredicted RBP17.05■□□□□ 0.32
CLCN1-201ENST00000343257 GRAMD1CQ8IYS0 662 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 HDXQ7Z353 690 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 HINFPQ9BQA5 517 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 AKAP2Q9Y2D5 859 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 ITSN1Q15811 1721 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 CRYBG1Q9Y4K1 1723 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
CLCN1-201ENST00000343257 ATP5J2-PTCD1G3V325 749 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 PTCD1O75127 700 aaKnown RBP17.05■□□□□ 0.32
CLCN1-201ENST00000343257 HMGB1P09429 215 aaKnown RBP17.05■□□□□ 0.32
CLCN1-201ENST00000343257 CNNM3Q8NE01 707 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 SALL1Q9NSC2 1324 aa17.05■□□□□ 0.32
CLCN1-201ENST00000343257 RGPD1P0DJD0 1748 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 MAP2K7O14733 419 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 CUTAO60888 179 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 COBLO75128 1261 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 CMA1P23946 247 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 VSNL1P62760 191 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 HSP90B2PQ58FF3 399 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 SHC4Q6S5L8 630 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 NFE2L3Q9Y4A8 694 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 YEATS4O95619 227 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 ABL1P00519 1130 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 HSPD1P10809 573 aaKnown RBP17.04■□□□□ 0.32
CLCN1-201ENST00000343257 ATP2B1P20020 1258 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 SAMSN1Q9NSI8 373 aaKnown RBP17.04■□□□□ 0.32
CLCN1-201ENST00000343257 POLR3EQ9NVU0 708 aa17.04■□□□□ 0.32
CLCN1-201ENST00000343257 BMP6P22004 513 aa17.03■□□□□ 0.32
CLCN1-201ENST00000343257 FMR1Q06787 632 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLCN1-201ENST00000343257 SRGAP1Q7Z6B7 1085 aa17.03■□□□□ 0.32
CLCN1-201ENST00000343257 CDC5LQ99459 802 aaKnown RBP17.03■□□□□ 0.32
CLCN1-201ENST00000343257 HDAC5Q9UQL6 1122 aa17.03■□□□□ 0.32
CLCN1-201ENST00000343257 PLEKHG2Q9H7P9 1386 aa17.03■□□□□ 0.32
CLCN1-201ENST00000343257 IVLP07476 585 aa17.03■□□□□ 0.32
CLCN1-201ENST00000343257 BRD3Q15059 726 aa17.03■□□□□ 0.32
CLCN1-201ENST00000343257 KLHL10Q6JEL2 608 aa17.03■□□□□ 0.32
CLCN1-201ENST00000343257 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
CLCN1-201ENST00000343257 METTL16Q86W50 562 aaKnown RBP17.03■□□□□ 0.32
CLCN1-201ENST00000343257 CHD2O14647 1828 aaKnown RBP17.03■□□□□ 0.32
CLCN1-201ENST00000343257 STX17P56962 302 aa17.03■□□□□ 0.32
CLCN1-201ENST00000343257 LRRC31Q6UY01 552 aa17.03■□□□□ 0.32
CLCN1-201ENST00000343257 FAM204AQ9H8W3 233 aa17.02■□□□□ 0.32
CLCN1-201ENST00000343257 BABAM1Q9NWV8 329 aa17.02■□□□□ 0.32
CLCN1-201ENST00000343257 PSD3Q9NYI0 1048 aa17.02■□□□□ 0.32
CLCN1-201ENST00000343257 AGLP35573 1532 aa17.02■□□□□ 0.31
CLCN1-201ENST00000343257 UBE2Q2LH0YL09 131 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms