RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 RBM19Q9Y4C8 960 aaKnown RBP23.25■■□□□ 1.31
GTF3C5-201ENST00000342018 CCDC171Q6TFL3 1326 aa23.24■■□□□ 1.31
GTF3C5-201ENST00000342018 PTH1RQ03431 593 aa23.24■■□□□ 1.31
GTF3C5-201ENST00000342018 TBC1D22AQ8WUA7 517 aa23.24■■□□□ 1.31
GTF3C5-201ENST00000342018 NSUN4Q96CB9 384 aaKnown RBP23.24■■□□□ 1.31
GTF3C5-201ENST00000342018 MIGA1Q8NAN2 632 aa23.23■■□□□ 1.31
GTF3C5-201ENST00000342018 LSG1Q9H089 658 aaKnown RBP23.23■■□□□ 1.31
GTF3C5-201ENST00000342018 ARFGEF1Q9Y6D6 1849 aa23.23■■□□□ 1.31
GTF3C5-201ENST00000342018 ARHGAP27Q6ZUM4 889 aa23.23■■□□□ 1.31
GTF3C5-201ENST00000342018 ADGRA1Q86SQ6 560 aa23.23■■□□□ 1.31
GTF3C5-201ENST00000342018 NIM1KQ8IY84 436 aa23.23■■□□□ 1.31
GTF3C5-201ENST00000342018 ZNF384Q8TF68 577 aa23.23■■□□□ 1.31
GTF3C5-201ENST00000342018 YDJCA8MPS7 323 aa23.22■■□□□ 1.31
GTF3C5-201ENST00000342018 F8W031 263 aaPredicted RBP23.22■■□□□ 1.31
GTF3C5-201ENST00000342018 AIDAQ96BJ3 306 aa23.22■■□□□ 1.31
GTF3C5-201ENST00000342018 TBC1D32Q96NH3 1257 aa23.22■■□□□ 1.31
GTF3C5-201ENST00000342018 COL4A5P29400 1685 aa23.22■■□□□ 1.31
GTF3C5-201ENST00000342018 USP17L3A6NCW0 530 aa23.21■■□□□ 1.31
GTF3C5-201ENST00000342018 USP17L4A6NCW7 530 aa23.21■■□□□ 1.31
GTF3C5-201ENST00000342018 GPAA1O43292 621 aa23.21■■□□□ 1.31
GTF3C5-201ENST00000342018 USP17L1Q7RTZ2 530 aa23.21■■□□□ 1.31
GTF3C5-201ENST00000342018 VPS33BQ9H267 617 aa23.21■■□□□ 1.31
GTF3C5-201ENST00000342018 SCN9AQ15858 1988 aa23.21■■□□□ 1.31
GTF3C5-201ENST00000342018 RAD17O75943 681 aa23.21■■□□□ 1.31
GTF3C5-201ENST00000342018 VPS53Q5VIR6 699 aa23.21■■□□□ 1.31
GTF3C5-201ENST00000342018 CERS5Q8N5B7 392 aa23.21■■□□□ 1.31
GTF3C5-201ENST00000342018 DIXDC1Q155Q3 683 aa23.2■■□□□ 1.3
GTF3C5-201ENST00000342018 STRIP1Q5VSL9 837 aa23.2■■□□□ 1.3
GTF3C5-201ENST00000342018 MBD4O95243 580 aa23.2■■□□□ 1.3
GTF3C5-201ENST00000342018 CCDC88AQ3V6T2 1871 aa23.2■■□□□ 1.3
GTF3C5-201ENST00000342018 JDP2Q8WYK2 163 aa23.2■■□□□ 1.3
GTF3C5-201ENST00000342018 ARMT1Q9H993 441 aa23.2■■□□□ 1.3
GTF3C5-201ENST00000342018 DACT2Q5SW24 774 aa23.18■■□□□ 1.3
GTF3C5-201ENST00000342018 ZNRF3Q9ULT6 936 aa23.18■■□□□ 1.3
GTF3C5-201ENST00000342018 LTBP3Q9NS15 1303 aa23.18■■□□□ 1.3
GTF3C5-201ENST00000342018 MAGEB6P1A0A0J9YX57 407 aa23.18■■□□□ 1.3
GTF3C5-201ENST00000342018 YBX3P16989 372 aaKnown RBP eCLIP23.18■■□□□ 1.31e-7■□□□□ 9.3
GTF3C5-201ENST00000342018 MCCP23508 829 aa23.18■■□□□ 1.3
GTF3C5-201ENST00000342018 DYNLL1P63167 89 aaKnown RBP23.18■■□□□ 1.3
GTF3C5-201ENST00000342018 GSTO1P78417 241 aa23.18■■□□□ 1.3
GTF3C5-201ENST00000342018 LCORLQ8N3X6 602 aa23.18■■□□□ 1.3
GTF3C5-201ENST00000342018 TTF2Q9UNY4 1162 aaKnown RBP23.18■■□□□ 1.3
GTF3C5-201ENST00000342018 MAST2Q6P0Q8 1798 aa23.17■■□□□ 1.3
GTF3C5-201ENST00000342018 HSPD1P10809 573 aaKnown RBP23.17■■□□□ 1.3
GTF3C5-201ENST00000342018 PRELPP51888 382 aa23.17■■□□□ 1.3
GTF3C5-201ENST00000342018 AATFQ9NY61 560 aaKnown RBP eCLIP23.17■■□□□ 1.3
GTF3C5-201ENST00000342018 RBM8AQ9Y5S9 174 aaKnown RBP23.17■■□□□ 1.3
GTF3C5-201ENST00000342018 APPP05067 770 aa23.16■■□□□ 1.3
GTF3C5-201ENST00000342018 RBM25P49756 843 aaKnown RBP23.16■■□□□ 1.3
GTF3C5-201ENST00000342018 SCNN1DP51172 638 aa23.16■■□□□ 1.3
GTF3C5-201ENST00000342018 KIAA0825Q8IV33 1275 aa23.16■■□□□ 1.3
GTF3C5-201ENST00000342018 MAP4K1Q92918 833 aa23.16■■□□□ 1.3
GTF3C5-201ENST00000342018 STRBPQ96SI9 672 aaKnown RBP23.16■■□□□ 1.3
GTF3C5-201ENST00000342018 PSMD14O00487 310 aa23.15■■□□□ 1.3
GTF3C5-201ENST00000342018 UTRNP46939 3433 aa23.14■■□□□ 1.3
GTF3C5-201ENST00000342018 LDHCP07864 332 aa23.14■■□□□ 1.3
GTF3C5-201ENST00000342018 PALD1Q9ULE6 856 aa23.14■■□□□ 1.3
GTF3C5-201ENST00000342018 SUGT1Q9Y2Z0 365 aa23.14■■□□□ 1.3
GTF3C5-201ENST00000342018 PRKAB2O43741 272 aa23.14■■□□□ 1.29
GTF3C5-201ENST00000342018 DSCC1Q9BVC3 393 aa23.14■■□□□ 1.29
GTF3C5-201ENST00000342018 SLC4A4Q9Y6R1 1079 aa23.14■■□□□ 1.29
GTF3C5-201ENST00000342018 MROH7-TTC4A0A0A0MT08 1334 aa23.13■■□□□ 1.29
GTF3C5-201ENST00000342018 HSPA4P34932 840 aa23.13■■□□□ 1.29
GTF3C5-201ENST00000342018 SLF2Q8IX21 1173 aa23.13■■□□□ 1.29
GTF3C5-201ENST00000342018 RIOK1Q9BRS2 568 aaKnown RBP23.13■■□□□ 1.29
GTF3C5-201ENST00000342018 NOL10Q9BSC4 688 aaKnown RBP23.13■■□□□ 1.29
GTF3C5-201ENST00000342018 MYH2Q9UKX2 1941 aa23.13■■□□□ 1.29
GTF3C5-201ENST00000342018 FOXP2O15409 715 aa23.12■■□□□ 1.29
GTF3C5-201ENST00000342018 EPB41L2O43491 1005 aaKnown RBP23.12■■□□□ 1.29
GTF3C5-201ENST00000342018 FKBP1AP62942 108 aaKnown RBP23.12■■□□□ 1.29
GTF3C5-201ENST00000342018 CXCL9Q07325 125 aa23.12■■□□□ 1.29
GTF3C5-201ENST00000342018 GPR162Q16538 588 aa23.12■■□□□ 1.29
GTF3C5-201ENST00000342018 ZBTB12Q9Y330 459 aaPredicted RBP23.12■■□□□ 1.29
GTF3C5-201ENST00000342018 U3KPZ7 1027 aaPredicted RBP23.12■■□□□ 1.29
GTF3C5-201ENST00000342018 IGSF3O75054 1194 aa23.12■■□□□ 1.29
GTF3C5-201ENST00000342018 RSBN1LQ6PCB5 846 aaPredicted RBP23.12■■□□□ 1.29
GTF3C5-201ENST00000342018 TMED8Q6PL24 325 aaPredicted RBP23.12■■□□□ 1.29
GTF3C5-201ENST00000342018 BTDP43251 543 aa23.11■■□□□ 1.29
GTF3C5-201ENST00000342018 NECTIN1Q15223 517 aa23.11■■□□□ 1.29
GTF3C5-201ENST00000342018 SDR42E1Q8WUS8 393 aa23.11■■□□□ 1.29
GTF3C5-201ENST00000342018 ZNF646O15015 1829 aaPredicted RBP23.1■■□□□ 1.29
GTF3C5-201ENST00000342018 BAG3O95817 575 aa23.1■■□□□ 1.29
GTF3C5-201ENST00000342018 VIL1P09327 827 aaKnown RBP23.1■■□□□ 1.29
GTF3C5-201ENST00000342018 LMNB1P20700 586 aa23.1■■□□□ 1.29
GTF3C5-201ENST00000342018 CREB3L3Q68CJ9 461 aa23.1■■□□□ 1.29
GTF3C5-201ENST00000342018 CIAPIN1Q6FI81 312 aa23.1■■□□□ 1.29
GTF3C5-201ENST00000342018 PATL2C9JE40 543 aaKnown RBP23.1■■□□□ 1.29
GTF3C5-201ENST00000342018 SLC27A2O14975 620 aa23.1■■□□□ 1.29
GTF3C5-201ENST00000342018 GNAT2P19087 354 aa23.1■■□□□ 1.29
GTF3C5-201ENST00000342018 RBM5P52756 815 aaKnown RBP eCLIP23.1■■□□□ 1.293e-10■■□□□ 11.6
GTF3C5-201ENST00000342018 DAGLAQ9Y4D2 1042 aa23.1■■□□□ 1.29
GTF3C5-201ENST00000342018 FGAP02671 866 aa23.09■■□□□ 1.29
GTF3C5-201ENST00000342018 RASEFQ8IZ41 740 aa23.09■■□□□ 1.29
GTF3C5-201ENST00000342018 TEKT1Q969V4 418 aa23.09■■□□□ 1.29
GTF3C5-201ENST00000342018 KIF2CQ99661 725 aa23.09■■□□□ 1.29
GTF3C5-201ENST00000342018 PSME4Q14997 1843 aa23.09■■□□□ 1.29
GTF3C5-201ENST00000342018 GSG1L2A8MUP6 293 aa23.08■■□□□ 1.29
GTF3C5-201ENST00000342018 ANP32AP39687 249 aaKnown RBP23.08■■□□□ 1.29
GTF3C5-201ENST00000342018 CRKP46108 304 aa23.08■■□□□ 1.29
GTF3C5-201ENST00000342018 EIF6P56537 245 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms