RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 GNL3LQ9NVN8 582 aaKnown RBP25.06■■□□□ 1.6
SYNE2-201ENST00000341472 ANGEL1Q9UNK9 670 aaKnown RBP25.06■■□□□ 1.6
SYNE2-201ENST00000341472 SUGT1Q9Y2Z0 365 aa25.06■■□□□ 1.6
SYNE2-201ENST00000341472 PPP1R12BO60237 982 aaPredicted RBP25.05■■□□□ 1.6
SYNE2-201ENST00000341472 SPDYE2Q495Y8 402 aa25.05■■□□□ 1.6
SYNE2-201ENST00000341472 LDLRAD1Q5T700 205 aa25.05■■□□□ 1.6
SYNE2-201ENST00000341472 WDR66Q8TBY9 1149 aa25.05■■□□□ 1.6
SYNE2-201ENST00000341472 MTX1Q13505 466 aa25.04■■□□□ 1.6
SYNE2-201ENST00000341472 RNF186Q9NXI6 227 aa25.04■■□□□ 1.6
SYNE2-201ENST00000341472 TNFAIP1Q13829 316 aa25.03■■□□□ 1.6
SYNE2-201ENST00000341472 NBPF12Q5TAG4 269 aaPredicted RBP25.03■■□□□ 1.6
SYNE2-201ENST00000341472 TMEM57Q8N5G2 664 aa25.03■■□□□ 1.6
SYNE2-201ENST00000341472 TEKT1Q969V4 418 aa25.03■■□□□ 1.6
SYNE2-201ENST00000341472 ZBED9Q6R2W3 1325 aa25.03■■□□□ 1.6
SYNE2-201ENST00000341472 TRPA1O75762 1119 aa25.02■■□□□ 1.6
SYNE2-201ENST00000341472 SAGE1Q9NXZ1 904 aa25.02■■□□□ 1.6
SYNE2-201ENST00000341472 THSD7BQ9C0I4 1608 aa25.01■■□□□ 1.59
SYNE2-201ENST00000341472 SLC10A4Q96EP9 437 aa25.01■■□□□ 1.59
SYNE2-201ENST00000341472 COL1A1P02452 1464 aaPredicted RBP25.01■■□□□ 1.59
SYNE2-201ENST00000341472 TIMM10P62072 90 aa25■■□□□ 1.59
SYNE2-201ENST00000341472 MAP3K11Q16584 847 aa25■■□□□ 1.59
SYNE2-201ENST00000341472 ZDHHC15Q96MV8 337 aa25■■□□□ 1.59
SYNE2-201ENST00000341472 FZD1Q9UP38 647 aa25■■□□□ 1.59
SYNE2-201ENST00000341472 AKAP2Q9Y2D5 859 aa25■■□□□ 1.59
SYNE2-201ENST00000341472 MAST3O60307 1309 aa25■■□□□ 1.59
SYNE2-201ENST00000341472 ZNF646O15015 1829 aaPredicted RBP25■■□□□ 1.59
SYNE2-201ENST00000341472 TCP10L2B9ZVM9 353 aa24.99■■□□□ 1.59
SYNE2-201ENST00000341472 TNNI2P48788 182 aa24.99■■□□□ 1.59
SYNE2-201ENST00000341472 FTSJ3Q8IY81 847 aaKnown RBP24.99■■□□□ 1.59
SYNE2-201ENST00000341472 PAPPA2Q9BXP8 1791 aa24.99■■□□□ 1.59
SYNE2-201ENST00000341472 DENND2AQ9ULE3 1009 aa24.99■■□□□ 1.59
SYNE2-201ENST00000341472 UNCXA6NJT0 531 aa24.98■■□□□ 1.59
SYNE2-201ENST00000341472 SEMA3EO15041 775 aa24.98■■□□□ 1.59
SYNE2-201ENST00000341472 PHKA1P46020 1223 aa24.98■■□□□ 1.59
SYNE2-201ENST00000341472 TFCP2Q12800 502 aa24.98■■□□□ 1.59
SYNE2-201ENST00000341472 MKRN3Q13064 507 aaKnown RBP24.98■■□□□ 1.59
SYNE2-201ENST00000341472 HHIPL2Q6UWX4 724 aa24.98■■□□□ 1.59
SYNE2-201ENST00000341472 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.98■■□□□ 1.59
SYNE2-201ENST00000341472 A0A1B0GUL6 1792 aa24.98■■□□□ 1.59
SYNE2-201ENST00000341472 USP2O75604 605 aaPredicted RBP24.97■■□□□ 1.59
SYNE2-201ENST00000341472 ADORA1P30542 326 aa24.97■■□□□ 1.59
SYNE2-201ENST00000341472 IREB2P48200 963 aaKnown RBP24.97■■□□□ 1.59
SYNE2-201ENST00000341472 TM4SF4P48230 202 aa24.97■■□□□ 1.59
SYNE2-201ENST00000341472 G3BP1Q13283 466 aaKnown RBP eCLIP24.97■■□□□ 1.59
SYNE2-201ENST00000341472 CCDC102BQ68D86 513 aa24.97■■□□□ 1.59
SYNE2-201ENST00000341472 APOBEC3HQ6NTF7 200 aaKnown RBP24.97■■□□□ 1.59
SYNE2-201ENST00000341472 SPRYD7Q5W111 196 aa24.96■■□□□ 1.59
SYNE2-201ENST00000341472 TMOD2Q9NZR1 351 aa24.96■■□□□ 1.59
SYNE2-201ENST00000341472 PNMA6EA0A0J9YXQ4 647 aa24.95■■□□□ 1.58
SYNE2-201ENST00000341472 TEPSINQ96N21 525 aa24.95■■□□□ 1.58
SYNE2-201ENST00000341472 NEUROD6Q96NK8 337 aa24.95■■□□□ 1.58
SYNE2-201ENST00000341472 A0A1B0GUL7 405 aa24.94■■□□□ 1.58
SYNE2-201ENST00000341472 ZBTB22O15209 634 aa24.94■■□□□ 1.58
SYNE2-201ENST00000341472 LDHBP07195 334 aaKnown RBP24.94■■□□□ 1.58
SYNE2-201ENST00000341472 CACNB3P54284 484 aa24.94■■□□□ 1.58
SYNE2-201ENST00000341472 XAGE2Q96GT9 111 aa24.94■■□□□ 1.58
SYNE2-201ENST00000341472 CLMNQ96JQ2 1002 aa24.94■■□□□ 1.58
SYNE2-201ENST00000341472 TMEM39BQ9GZU3 492 aa24.94■■□□□ 1.58
SYNE2-201ENST00000341472 ATP8B2P98198 1209 aa24.93■■□□□ 1.58
SYNE2-201ENST00000341472 SREBF2Q12772 1141 aa24.93■■□□□ 1.58
SYNE2-201ENST00000341472 MVPQ14764 893 aaKnown RBP24.93■■□□□ 1.58
SYNE2-201ENST00000341472 FKBP1CQ5VVH2 108 aa24.93■■□□□ 1.58
SYNE2-201ENST00000341472 ITPRIPQ8IWB1 547 aa24.93■■□□□ 1.58
SYNE2-201ENST00000341472 ABHD8Q96I13 439 aa24.93■■□□□ 1.58
SYNE2-201ENST00000341472 ZBTB7BO15156 539 aaPredicted RBP24.92■■□□□ 1.58
SYNE2-201ENST00000341472 ANKRD13AQ8IZ07 590 aa24.92■■□□□ 1.58
SYNE2-201ENST00000341472 SALL1Q9NSC2 1324 aa24.91■■□□□ 1.58
SYNE2-201ENST00000341472 RLBP1P12271 317 aa24.91■■□□□ 1.58
SYNE2-201ENST00000341472 PRDX5P30044 214 aa24.91■■□□□ 1.58
SYNE2-201ENST00000341472 INHBEP58166 350 aa24.91■■□□□ 1.58
SYNE2-201ENST00000341472 GORABQ5T7V8 394 aa24.91■■□□□ 1.58
SYNE2-201ENST00000341472 FAM83AQ86UY5 434 aa24.91■■□□□ 1.58
SYNE2-201ENST00000341472 CDAN1Q8IWY9 1227 aa24.91■■□□□ 1.58
SYNE2-201ENST00000341472 ZGPATQ8N5A5 531 aaKnown RBP24.91■■□□□ 1.58
SYNE2-201ENST00000341472 WNK4Q96J92 1243 aa24.91■■□□□ 1.58
SYNE2-201ENST00000341472 MANSC4A6NHS7 340 aaPredicted RBP24.9■■□□□ 1.58
SYNE2-201ENST00000341472 DIXDC1Q155Q3 683 aa24.9■■□□□ 1.58
SYNE2-201ENST00000341472 DAGLAQ9Y4D2 1042 aa24.9■■□□□ 1.58
SYNE2-201ENST00000341472 SSC5DA1L4H1 1573 aa24.89■■□□□ 1.58
SYNE2-201ENST00000341472 TBC1D8O95759 1140 aa24.89■■□□□ 1.58
SYNE2-201ENST00000341472 ZBTB48P10074 688 aaPredicted RBP24.89■■□□□ 1.58
SYNE2-201ENST00000341472 MAP3K9P80192 1104 aa24.89■■□□□ 1.58
SYNE2-201ENST00000341472 RASGRF1Q13972 1273 aa24.89■■□□□ 1.58
SYNE2-201ENST00000341472 POLA2Q14181 598 aa24.89■■□□□ 1.58
SYNE2-201ENST00000341472 SSH3Q8TE77 659 aa24.89■■□□□ 1.58
SYNE2-201ENST00000341472 C1orf115Q9H7X2 142 aa24.89■■□□□ 1.58
SYNE2-201ENST00000341472 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.89■■□□□ 1.58
SYNE2-201ENST00000341472 DGKZQ13574 1117 aa24.88■■□□□ 1.57
SYNE2-201ENST00000341472 SPTY2D1Q68D10 685 aaPredicted RBP24.88■■□□□ 1.57
SYNE2-201ENST00000341472 CDC42EP5Q6NZY7 148 aa24.88■■□□□ 1.57
SYNE2-201ENST00000341472 HOOK2Q96ED9 719 aa24.88■■□□□ 1.57
SYNE2-201ENST00000341472 MCOLN1Q9GZU1 580 aa24.88■■□□□ 1.57
SYNE2-201ENST00000341472 USP40Q9NVE5 1235 aa24.88■■□□□ 1.57
SYNE2-201ENST00000341472 ABCF2Q9UG63 623 aa24.88■■□□□ 1.57
SYNE2-201ENST00000341472 SURF6O75683 361 aaKnown RBP24.87■■□□□ 1.57
SYNE2-201ENST00000341472 OS9Q13438 667 aaPredicted RBP24.87■■□□□ 1.57
SYNE2-201ENST00000341472 PDS5AQ29RF7 1337 aaKnown RBP24.86■■□□□ 1.57
SYNE2-201ENST00000341472 MS4A1P11836 297 aa24.86■■□□□ 1.57
SYNE2-201ENST00000341472 PANK1Q8TE04 598 aa24.86■■□□□ 1.57
SYNE2-201ENST00000341472 FAM151AQ8WW52 585 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms