RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 BTBD19C9JJ37 291 aa20.93■□□□□ 0.94
NECTIN1-202ENST00000340882 PLIN1O60240 522 aa20.93■□□□□ 0.94
NECTIN1-202ENST00000340882 SLC4A2P04920 1241 aa20.93■□□□□ 0.94
NECTIN1-202ENST00000340882 TNFAIP1Q13829 316 aa20.93■□□□□ 0.94
NECTIN1-202ENST00000340882 GRIK5Q16478 980 aa20.93■□□□□ 0.94
NECTIN1-202ENST00000340882 DZIP1LQ8IYY4 767 aaKnown RBP20.93■□□□□ 0.94
NECTIN1-202ENST00000340882 ZNF594Q96JF6 807 aaPredicted RBP20.93■□□□□ 0.94
NECTIN1-202ENST00000340882 STK31Q9BXU1 1019 aa20.93■□□□□ 0.94
NECTIN1-202ENST00000340882 TTF2Q9UNY4 1162 aaKnown RBP20.93■□□□□ 0.94
NECTIN1-202ENST00000340882 FAM205AQ6ZU69 1335 aa20.93■□□□□ 0.94
NECTIN1-202ENST00000340882 MFSD14BQ5SR56 506 aa20.92■□□□□ 0.94
NECTIN1-202ENST00000340882 DPF3Q92784 378 aa20.92■□□□□ 0.94
NECTIN1-202ENST00000340882 PRO3102Q9H379 93 aa20.92■□□□□ 0.94
NECTIN1-202ENST00000340882 SERPINA10Q9UK55 444 aa20.92■□□□□ 0.94
NECTIN1-202ENST00000340882 SNCAIPQ9Y6H5 919 aa20.92■□□□□ 0.94
NECTIN1-202ENST00000340882 SPDYE5A6NIY4 337 aa20.91■□□□□ 0.94
NECTIN1-202ENST00000340882 DLL1O00548 723 aa20.91■□□□□ 0.94
NECTIN1-202ENST00000340882 DDX10Q13206 875 aaKnown RBP20.91■□□□□ 0.94
NECTIN1-202ENST00000340882 IFIT5Q13325 482 aaKnown RBP20.91■□□□□ 0.94
NECTIN1-202ENST00000340882 EPHA10Q5JZY3 1008 aa20.91■□□□□ 0.94
NECTIN1-202ENST00000340882 TDRD7Q8NHU6 1098 aaKnown RBP20.91■□□□□ 0.94
NECTIN1-202ENST00000340882 CHMP4AQ9BY43 222 aa20.91■□□□□ 0.94
NECTIN1-202ENST00000340882 CACNA1FO60840 1977 aa20.9■□□□□ 0.94
NECTIN1-202ENST00000340882 A0A0C4DFX4 3053 aa20.9■□□□□ 0.94
NECTIN1-202ENST00000340882 GYG1P46976 350 aa20.9■□□□□ 0.94
NECTIN1-202ENST00000340882 CACNB3P54284 484 aa20.9■□□□□ 0.94
NECTIN1-202ENST00000340882 FLIIQ13045 1269 aa20.9■□□□□ 0.94
NECTIN1-202ENST00000340882 UBE2Q1Q7Z7E8 422 aa20.9■□□□□ 0.94
NECTIN1-202ENST00000340882 ZKSCAN4Q969J2 545 aaPredicted RBP20.9■□□□□ 0.94
NECTIN1-202ENST00000340882 CHMP3Q9Y3E7 222 aa20.9■□□□□ 0.94
NECTIN1-202ENST00000340882 CSADQ9Y600 493 aa20.9■□□□□ 0.94
NECTIN1-202ENST00000340882 IRF6O14896 467 aa20.89■□□□□ 0.93
NECTIN1-202ENST00000340882 CRKP46108 304 aa20.89■□□□□ 0.93
NECTIN1-202ENST00000340882 KIF22Q14807 665 aa20.89■□□□□ 0.93
NECTIN1-202ENST00000340882 TWISTNBQ3B726 338 aaPredicted RBP20.89■□□□□ 0.93
NECTIN1-202ENST00000340882 LINS1Q8NG48 757 aa20.89■□□□□ 0.93
NECTIN1-202ENST00000340882 DNAAF4Q8WXU2 420 aa20.89■□□□□ 0.93
NECTIN1-202ENST00000340882 MYH16Q9H6N6 1097 aa20.89■□□□□ 0.93
NECTIN1-202ENST00000340882 MGAMO43451 1857 aa20.88■□□□□ 0.93
NECTIN1-202ENST00000340882 CETPP11597 493 aa20.88■□□□□ 0.93
NECTIN1-202ENST00000340882 C17orf99Q6UX52 265 aa20.88■□□□□ 0.93
NECTIN1-202ENST00000340882 SLC17A8Q8NDX2 589 aa20.88■□□□□ 0.93
NECTIN1-202ENST00000340882 TRIM47Q96LD4 638 aa20.88■□□□□ 0.93
NECTIN1-202ENST00000340882 CPA4Q9UI42 421 aa20.88■□□□□ 0.93
NECTIN1-202ENST00000340882 LAMA3Q16787 3333 aa20.88■□□□□ 0.93
NECTIN1-202ENST00000340882 FKBP5Q13451 457 aaPredicted RBP20.87■□□□□ 0.93
NECTIN1-202ENST00000340882 LMBR1LQ6UX01 489 aa20.87■□□□□ 0.93
NECTIN1-202ENST00000340882 ERO1BQ86YB8 467 aa20.87■□□□□ 0.93
NECTIN1-202ENST00000340882 FAM84BQ96KN1 310 aaPredicted RBP20.87■□□□□ 0.93
NECTIN1-202ENST00000340882 GNRH1P01148 92 aa20.86■□□□□ 0.93
NECTIN1-202ENST00000340882 LDHAL6AQ6ZMR3 332 aa20.86■□□□□ 0.93
NECTIN1-202ENST00000340882 WRNIP1Q96S55 665 aa20.86■□□□□ 0.93
NECTIN1-202ENST00000340882 ZCCHC17Q9NP64 241 aaKnown RBP20.86■□□□□ 0.93
NECTIN1-202ENST00000340882 SRRDQ9UH36 339 aa20.86■□□□□ 0.93
NECTIN1-202ENST00000340882 ALPK3Q96L96 1907 aa20.85■□□□□ 0.93
NECTIN1-202ENST00000340882 SOX1O00570 391 aaPredicted RBP20.85■□□□□ 0.93
NECTIN1-202ENST00000340882 OSBPP22059 807 aa20.85■□□□□ 0.93
NECTIN1-202ENST00000340882 PSMC4P43686 418 aa20.85■□□□□ 0.93
NECTIN1-202ENST00000340882 TNNI2P48788 182 aa20.85■□□□□ 0.93
NECTIN1-202ENST00000340882 PRMT2P55345 433 aa20.85■□□□□ 0.93
NECTIN1-202ENST00000340882 SNAPC2Q13487 334 aa20.85■□□□□ 0.93
NECTIN1-202ENST00000340882 ADGRA2Q96PE1 1338 aa20.84■□□□□ 0.93
NECTIN1-202ENST00000340882 CCL5P13501 91 aa20.84■□□□□ 0.93
NECTIN1-202ENST00000340882 HIBADHP31937 336 aaKnown RBP20.84■□□□□ 0.93
NECTIN1-202ENST00000340882 GJA8P48165 433 aa20.84■□□□□ 0.93
NECTIN1-202ENST00000340882 PPIL2Q13356 520 aa20.84■□□□□ 0.93
NECTIN1-202ENST00000340882 CNNM1Q9NRU3 951 aa20.84■□□□□ 0.93
NECTIN1-202ENST00000340882 IQSEC3Q9UPP2 1182 aaPredicted RBP20.84■□□□□ 0.93
NECTIN1-202ENST00000340882 RIPOR2Q9Y4F9 1068 aa20.84■□□□□ 0.93
NECTIN1-202ENST00000340882 F6X3S4 739 aa20.83■□□□□ 0.93
NECTIN1-202ENST00000340882 WDHD1O75717 1129 aaPredicted RBP20.83■□□□□ 0.93
NECTIN1-202ENST00000340882 GJB1P08034 283 aa20.83■□□□□ 0.93
NECTIN1-202ENST00000340882 GRK4P32298 578 aa20.83■□□□□ 0.93
NECTIN1-202ENST00000340882 PUS3Q9BZE2 481 aaKnown RBP20.83■□□□□ 0.93
NECTIN1-202ENST00000340882 ZBTB7BO15156 539 aaPredicted RBP20.82■□□□□ 0.92
NECTIN1-202ENST00000340882 BEND3Q5T5X7 828 aa20.82■□□□□ 0.92
NECTIN1-202ENST00000340882 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.82■□□□□ 0.92
NECTIN1-202ENST00000340882 LRCH3Q96II8 777 aa20.82■□□□□ 0.92
NECTIN1-202ENST00000340882 AK9Q5TCS8 1911 aa20.81■□□□□ 0.92
NECTIN1-202ENST00000340882 INPP5BP32019 993 aa20.81■□□□□ 0.92
NECTIN1-202ENST00000340882 UBE4AQ14139 1066 aa20.81■□□□□ 0.92
NECTIN1-202ENST00000340882 CCDC57Q2TAC2 916 aa20.81■□□□□ 0.92
NECTIN1-202ENST00000340882 RAET1EQ8TD07 263 aa20.81■□□□□ 0.92
NECTIN1-202ENST00000340882 RNF208Q9H0X6 261 aa20.81■□□□□ 0.92
NECTIN1-202ENST00000340882 MYPNQ86TC9 1320 aa20.8■□□□□ 0.92
NECTIN1-202ENST00000340882 FMNL1O95466 1100 aaPredicted RBP20.8■□□□□ 0.92
NECTIN1-202ENST00000340882 CHAF1AQ13111 956 aaPredicted RBP20.8■□□□□ 0.92
NECTIN1-202ENST00000340882 MOGSQ13724 837 aa20.8■□□□□ 0.92
NECTIN1-202ENST00000340882 TAF7LQ5H9L4 462 aa20.8■□□□□ 0.92
NECTIN1-202ENST00000340882 MIGA2Q7L4E1 593 aa20.8■□□□□ 0.92
NECTIN1-202ENST00000340882 NKX2-3Q8TAU0 364 aa20.8■□□□□ 0.92
NECTIN1-202ENST00000340882 HTATIP2Q9BUP3 242 aa20.8■□□□□ 0.92
NECTIN1-202ENST00000340882 CUL9Q8IWT3 2517 aa20.79■□□□□ 0.92
NECTIN1-202ENST00000340882 PDHXO00330 501 aa20.79■□□□□ 0.92
NECTIN1-202ENST00000340882 PRKCZQ05513 592 aa20.79■□□□□ 0.92
NECTIN1-202ENST00000340882 ANKRD23Q86SG2 305 aa20.79■□□□□ 0.92
NECTIN1-202ENST00000340882 UNC93B1Q9H1C4 597 aa20.79■□□□□ 0.92
NECTIN1-202ENST00000340882 PRKRIP1Q9H875 184 aaPredicted RBP20.79■□□□□ 0.92
NECTIN1-202ENST00000340882 GABRQQ9UN88 632 aa20.79■□□□□ 0.92
NECTIN1-202ENST00000340882 DOCK3Q8IZD9 2030 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms