RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 KIF1BO60333 1816 aa22.02■■□□□ 1.12
CDK13-202ENST00000340829 PRR36Q9H6K5 1346 aa22.02■■□□□ 1.12
CDK13-202ENST00000340829 PRDM1O75626 825 aa22.02■■□□□ 1.12
CDK13-202ENST00000340829 MCM3P25205 808 aa22.02■■□□□ 1.12
CDK13-202ENST00000340829 PARP10Q53GL7 1025 aa22.02■■□□□ 1.12
CDK13-202ENST00000340829 C6orf50Q9HD87 102 aa22.02■■□□□ 1.12
CDK13-202ENST00000340829 LIG1P18858 919 aa22.02■■□□□ 1.11
CDK13-202ENST00000340829 MYL10Q9BUA6 226 aa22.02■■□□□ 1.11
CDK13-202ENST00000340829 TM6SF1Q9BZW5 370 aa22.02■■□□□ 1.11
CDK13-202ENST00000340829 RNF216Q9NWF9 866 aaPredicted RBP22.02■■□□□ 1.11
CDK13-202ENST00000340829 ANO1Q5XXA6 986 aa22.01■■□□□ 1.11
CDK13-202ENST00000340829 DENND2AQ9ULE3 1009 aa22.01■■□□□ 1.11
CDK13-202ENST00000340829 PROSER3Q2NL68 480 aa22.01■■□□□ 1.11
CDK13-202ENST00000340829 SAMM50Q9Y512 469 aa22.01■■□□□ 1.11
CDK13-202ENST00000340829 USP8P40818 1118 aa22.01■■□□□ 1.11
CDK13-202ENST00000340829 SEPT7Q16181 437 aaKnown RBP22.01■■□□□ 1.11
CDK13-202ENST00000340829 PLIN2Q99541 437 aa22.01■■□□□ 1.11
CDK13-202ENST00000340829 ELP1O95163 1332 aa22.01■■□□□ 1.11
CDK13-202ENST00000340829 IGSF1Q8N6C5 1336 aa22.01■■□□□ 1.11
CDK13-202ENST00000340829 TMCO5BA8MYB1 307 aa22.01■■□□□ 1.11
CDK13-202ENST00000340829 CLSTN2Q9H4D0 955 aa22.01■■□□□ 1.11
CDK13-202ENST00000340829 NOP2P46087 812 aaKnown RBP22■■□□□ 1.11
CDK13-202ENST00000340829 ZNF853P0CG23 659 aa22■■□□□ 1.11
CDK13-202ENST00000340829 POTEJP0CG39 1038 aa22■■□□□ 1.11
CDK13-202ENST00000340829 ZNF174Q15697 407 aa22■■□□□ 1.11
CDK13-202ENST00000340829 TTLL7Q6ZT98 887 aa22■■□□□ 1.11
CDK13-202ENST00000340829 TBCAO75347 108 aaKnown RBP22■■□□□ 1.11
CDK13-202ENST00000340829 SEC62Q99442 399 aaKnown RBP22■■□□□ 1.11
CDK13-202ENST00000340829 ZC3H12CQ9C0D7 883 aaKnown RBP22■■□□□ 1.11
CDK13-202ENST00000340829 UNC5CLQ8IV45 518 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 RRP36Q96EU6 259 aaKnown RBP21.99■■□□□ 1.11
CDK13-202ENST00000340829 VWA3AA6NCI4 1184 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 E7EWF7 191 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 RIMBP2O15034 1052 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 SYCP3Q8IZU3 236 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 LPIN2Q92539 896 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 SHROOM2Q13796 1616 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 CDC42BPAQ5VT25 1732 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 TNNI2P48788 182 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 CTDSPL2Q05D32 466 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 POTEB2H3BUK9 544 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 PHKBQ93100 1093 aa21.99■■□□□ 1.11
CDK13-202ENST00000340829 CHAMP1Q96JM3 812 aa21.98■■□□□ 1.11
CDK13-202ENST00000340829 MMRN2Q9H8L6 949 aa21.98■■□□□ 1.11
CDK13-202ENST00000340829 ZNF532Q9HCE3 1301 aa21.98■■□□□ 1.11
CDK13-202ENST00000340829 PLEKHG1Q9ULL1 1385 aa21.98■■□□□ 1.11
CDK13-202ENST00000340829 ERMNQ8TAM6 284 aa21.98■■□□□ 1.11
CDK13-202ENST00000340829 BCORL1Q5H9F3 1711 aa21.98■■□□□ 1.11
CDK13-202ENST00000340829 MYL5Q02045 173 aa21.98■■□□□ 1.11
CDK13-202ENST00000340829 USP6P35125 1406 aa21.98■■□□□ 1.11
CDK13-202ENST00000340829 SSH2Q76I76 1423 aa21.98■■□□□ 1.11
CDK13-202ENST00000340829 CETN1Q12798 172 aa21.98■■□□□ 1.11
CDK13-202ENST00000340829 TCIRG1Q13488 830 aa21.98■■□□□ 1.11
CDK13-202ENST00000340829 RBM28Q9NW13 759 aaKnown RBP21.98■■□□□ 1.11
CDK13-202ENST00000340829 RILPL1Q5EBL4 403 aa21.97■■□□□ 1.11
CDK13-202ENST00000340829 DEXIO95424 95 aa21.97■■□□□ 1.11
CDK13-202ENST00000340829 CYLC1P35663 651 aaPredicted RBP21.97■■□□□ 1.11
CDK13-202ENST00000340829 BMS1Q14692 1282 aaKnown RBP21.97■■□□□ 1.11
CDK13-202ENST00000340829 WDR78Q5VTH9 848 aa21.97■■□□□ 1.11
CDK13-202ENST00000340829 IQUBQ8NA54 791 aa21.97■■□□□ 1.11
CDK13-202ENST00000340829 DTHD1Q6ZMT9 781 aa21.97■■□□□ 1.11
CDK13-202ENST00000340829 ERCC6L2Q5T890 1561 aa21.97■■□□□ 1.11
CDK13-202ENST00000340829 PLCG2P16885 1265 aa21.97■■□□□ 1.11
CDK13-202ENST00000340829 HLTFQ14527 1009 aaKnown RBP eCLIP21.97■■□□□ 1.11
CDK13-202ENST00000340829 DIS3L2Q8IYB7 885 aaKnown RBP21.97■■□□□ 1.11
CDK13-202ENST00000340829 SAP30BPQ9UHR5 308 aaKnown RBP21.97■■□□□ 1.11
CDK13-202ENST00000340829 HIBADHP31937 336 aaKnown RBP21.96■■□□□ 1.11
CDK13-202ENST00000340829 SIRT2Q8IXJ6 389 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 CBX8Q9HC52 389 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 ERVV-2B6SEH9 535 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 CD2BP2O95400 341 aaKnown RBP21.96■■□□□ 1.11
CDK13-202ENST00000340829 CCDC175P0C221 793 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 DRC1Q96MC2 740 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 DSCC1Q9BVC3 393 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 SLAIN2Q9P270 581 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 V9GY48 417 aaPredicted RBP21.96■■□□□ 1.11
CDK13-202ENST00000340829 CHD1O14646 1710 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 SPECC1Q5M775 1068 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 PPP4R3AQ6IN85 833 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 SPATA5Q8NB90 893 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 SPAG5Q96R06 1193 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 SLU7O95391 586 aaKnown RBP21.96■■□□□ 1.11
CDK13-202ENST00000340829 CHMP4BP1P59074 171 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 STXBP4Q6ZWJ1 553 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 CCDC24Q8N4L8 307 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 EHBP1Q8NDI1 1231 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 KCNH3Q9ULD8 1083 aa21.96■■□□□ 1.11
CDK13-202ENST00000340829 PRPF4BQ13523 1007 aaKnown RBP21.95■■□□□ 1.1
CDK13-202ENST00000340829 KARSQ15046 597 aaKnown RBP21.95■■□□□ 1.1
CDK13-202ENST00000340829 CETN2P41208 172 aa21.95■■□□□ 1.1
CDK13-202ENST00000340829 GTF3C6Q969F1 213 aa21.95■■□□□ 1.1
CDK13-202ENST00000340829 PKNOX2Q96KN3 472 aa21.95■■□□□ 1.1
CDK13-202ENST00000340829 CCDC113Q9H0I3 377 aa21.95■■□□□ 1.1
CDK13-202ENST00000340829 TPCN1Q9ULQ1 816 aa21.95■■□□□ 1.1
CDK13-202ENST00000340829 KRT79Q5XKE5 535 aa21.95■■□□□ 1.1
CDK13-202ENST00000340829 STAP2Q9UGK3 403 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 IQGAP3Q86VI3 1631 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 MACROD2A1Z1Q3 448 aa21.94■■□□□ 1.1
CDK13-202ENST00000340829 PRAMEF22A3QJZ6 481 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms