RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 TBC1D22AQ8WUA7 517 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 DALRD3Q5D0E6 543 aaKnown RBP13.81□□□□□ -0.2
C2orf88-201ENST00000340623 TMEM67Q5HYA8 995 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 PIM2Q9P1W9 311 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 LIMCH1Q9UPQ0 1083 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 HLA-DOAP06340 250 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 MCM4P33991 863 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 GPR162Q16538 588 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 CCDC93Q567U6 631 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 CCDC125Q86Z20 511 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 ZSCAN31Q96LW9 406 aaPredicted RBP13.8□□□□□ -0.2
C2orf88-201ENST00000340623 PIH1D3Q9NQM4 214 aaKnown RBP13.8□□□□□ -0.2
C2orf88-201ENST00000340623 ATP6V1DQ9Y5K8 247 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 COL18A1P39060 1754 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 PLCG2P16885 1265 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 ANAPC15P60006 121 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 MICU3Q86XE3 530 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 STX8Q9UNK0 236 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 GOLGA8BA8MQT2 603 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 PRDM1O75626 825 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 VPS53Q5VIR6 699 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 SDR42E1Q8WUS8 393 aa13.8□□□□□ -0.2
C2orf88-201ENST00000340623 PRPF40AO75400 957 aaKnown RBP13.79□□□□□ -0.2
C2orf88-201ENST00000340623 ATP2B1P20020 1258 aa13.79□□□□□ -0.2
C2orf88-201ENST00000340623 MCM5P33992 734 aa13.79□□□□□ -0.2
C2orf88-201ENST00000340623 SLC10A5Q5PT55 438 aa13.79□□□□□ -0.2
C2orf88-201ENST00000340623 ZNF589Q86UQ0 364 aaPredicted RBP13.79□□□□□ -0.2
C2orf88-201ENST00000340623 MAPKAPK5Q8IW41 473 aa13.79□□□□□ -0.2
C2orf88-201ENST00000340623 NECAB1Q8N987 351 aa13.79□□□□□ -0.2
C2orf88-201ENST00000340623 SLC27A2O14975 620 aa13.79□□□□□ -0.2
C2orf88-201ENST00000340623 RAD17O75943 681 aa13.79□□□□□ -0.2
C2orf88-201ENST00000340623 RBM10P98175 930 aaKnown RBP13.79□□□□□ -0.2
C2orf88-201ENST00000340623 SAFBQ15424 915 aaKnown RBP eCLIP13.79□□□□□ -0.2
C2orf88-201ENST00000340623 RNF214Q8ND24 703 aa13.79□□□□□ -0.2
C2orf88-201ENST00000340623 SLC16A10Q8TF71 515 aa13.79□□□□□ -0.2
C2orf88-201ENST00000340623 POLRMTO00411 1230 aaKnown RBP13.79□□□□□ -0.2
C2orf88-201ENST00000340623 EIF6P56537 245 aaKnown RBP13.79□□□□□ -0.2
C2orf88-201ENST00000340623 CYP2E1P05181 493 aaPredicted RBP13.78□□□□□ -0.2
C2orf88-201ENST00000340623 LARP1BQ659C4 914 aaKnown RBP13.78□□□□□ -0.2
C2orf88-201ENST00000340623 TRIM22Q8IYM9 498 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 FAM84BQ96KN1 310 aaPredicted RBP13.78□□□□□ -0.2
C2orf88-201ENST00000340623 CRAMP1Q96RY5 1269 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 ARID3AQ99856 593 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 SPON1Q9HCB6 807 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 SLC12A7Q9Y666 1083 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 TCP10Q12799 353 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 DIXDC1Q155Q3 683 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 CAVIN1Q6NZI2 390 aaKnown RBP13.78□□□□□ -0.2
C2orf88-201ENST00000340623 PROM2Q8N271 834 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 TGFBRAP1Q8WUH2 860 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 Q6ZUG5 572 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 AMIGO3Q86WK7 504 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 ESR2Q92731 530 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 PALD1Q9ULE6 856 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 SNX14Q9Y5W7 946 aa13.78□□□□□ -0.2
C2orf88-201ENST00000340623 PRC1O43663 620 aa13.77□□□□□ -0.2
C2orf88-201ENST00000340623 PDCP20941 246 aa13.77□□□□□ -0.2
C2orf88-201ENST00000340623 OSBP2Q969R2 916 aa13.77□□□□□ -0.2
C2orf88-201ENST00000340623 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.2
C2orf88-201ENST00000340623 CD209Q9NNX6 404 aa13.77□□□□□ -0.2
C2orf88-201ENST00000340623 MARCH6O60337 910 aa13.77□□□□□ -0.21
C2orf88-201ENST00000340623 HSPD1P10809 573 aaKnown RBP13.77□□□□□ -0.21
C2orf88-201ENST00000340623 PRDX5P30044 214 aa13.77□□□□□ -0.21
C2orf88-201ENST00000340623 ZMYM1Q5SVZ6 1142 aa13.77□□□□□ -0.21
C2orf88-201ENST00000340623 OLFM4Q6UX06 510 aa13.77□□□□□ -0.21
C2orf88-201ENST00000340623 KCPQ6ZWJ8 1503 aa13.77□□□□□ -0.21
C2orf88-201ENST00000340623 MAST3O60307 1309 aa13.77□□□□□ -0.21
C2orf88-201ENST00000340623 KLF18A0A0U1RQI7 1052 aa13.77□□□□□ -0.21
C2orf88-201ENST00000340623 B4E1Z4 1266 aa13.77□□□□□ -0.21
C2orf88-201ENST00000340623 SEMA3EO15041 775 aa13.77□□□□□ -0.21
C2orf88-201ENST00000340623 SP8Q8IXZ3 490 aa13.77□□□□□ -0.21
C2orf88-201ENST00000340623 PUS7LQ9H0K6 701 aaKnown RBP13.77□□□□□ -0.21
C2orf88-201ENST00000340623 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.77□□□□□ -0.21
C2orf88-201ENST00000340623 CHGBP05060 677 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 DYNLL1P63167 89 aaKnown RBP13.76□□□□□ -0.21
C2orf88-201ENST00000340623 UBE3CQ15386 1083 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 CC2D2BQ6DHV5 1058 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 TEKT1Q969V4 418 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 TMX3Q96JJ7 454 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 PLCH1Q4KWH8 1693 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 GOLGA8AA7E2F4 631 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 ADD2P35612 726 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 CTDSPL2Q05D32 466 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 KRT23Q9C075 422 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 PNPLA7Q6ZV29 1317 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 TSPY3P0CV98 308 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 TSPY8P0CW00 308 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 DPEP1P16444 411 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 RBM25P49756 843 aaKnown RBP13.76□□□□□ -0.21
C2orf88-201ENST00000340623 AOC3Q16853 763 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 SOGA3Q5TF21 947 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 FERMT3Q86UX7 667 aa13.76□□□□□ -0.21
C2orf88-201ENST00000340623 ZNF277Q9NRM2 450 aaPredicted RBP13.76□□□□□ -0.21
C2orf88-201ENST00000340623 USP17L12C9JPN9 530 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 USP17L21D6R901 530 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 M0R2C6 588 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 XBP1P17861 261 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 AK2P54819 239 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 TTLL12Q14166 644 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms