RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SLU7O95391 586 aaKnown RBP16.67■□□□□ 0.26
CPSF7-201ENST00000340437 METAP2P50579 478 aaKnown RBP eCLIP16.67■□□□□ 0.26
CPSF7-201ENST00000340437 UBASH3AP57075 661 aa16.67■□□□□ 0.26
CPSF7-201ENST00000340437 FANCCQ00597 558 aa16.67■□□□□ 0.26
CPSF7-201ENST00000340437 UTP14AQ9BVJ6 771 aaKnown RBP16.67■□□□□ 0.26
CPSF7-201ENST00000340437 SNAP23O00161 211 aa16.66■□□□□ 0.26
CPSF7-201ENST00000340437 CDK11BP21127 795 aaKnown RBP16.66■□□□□ 0.26
CPSF7-201ENST00000340437 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
CPSF7-201ENST00000340437 NKX2-3Q8TAU0 364 aa16.66■□□□□ 0.26
CPSF7-201ENST00000340437 DPF2Q92785 391 aa16.66■□□□□ 0.26
CPSF7-201ENST00000340437 KDM3BQ7LBC6 1761 aa16.65■□□□□ 0.26
CPSF7-201ENST00000340437 GSDMDP57764 484 aa16.65■□□□□ 0.26
CPSF7-201ENST00000340437 TRIM29Q14134 588 aa16.65■□□□□ 0.26
CPSF7-201ENST00000340437 E4F1Q66K89 784 aaPredicted RBP16.65■□□□□ 0.26
CPSF7-201ENST00000340437 MEGF6O75095 1541 aa16.65■□□□□ 0.26
CPSF7-201ENST00000340437 ANTXR2P58335 489 aa16.65■□□□□ 0.26
CPSF7-201ENST00000340437 PPP1R13BQ96KQ4 1090 aa16.65■□□□□ 0.26
CPSF7-201ENST00000340437 FEZ1Q99689 392 aa16.65■□□□□ 0.26
CPSF7-201ENST00000340437 SLC26A6Q9BXS9 759 aa16.65■□□□□ 0.26
CPSF7-201ENST00000340437 GTPBP4Q9BZE4 634 aaKnown RBP16.65■□□□□ 0.26
CPSF7-201ENST00000340437 MED1Q15648 1581 aaPredicted RBP16.65■□□□□ 0.26
CPSF7-201ENST00000340437 EPC1Q9H2F5 836 aa16.65■□□□□ 0.26
CPSF7-201ENST00000340437 ZNF827Q17R98 1081 aa16.64■□□□□ 0.25
CPSF7-201ENST00000340437 VPS37DQ86XT2 251 aa16.64■□□□□ 0.25
CPSF7-201ENST00000340437 HPS5Q9UPZ3 1129 aa16.64■□□□□ 0.25
CPSF7-201ENST00000340437 ADGRL3Q9HAR2 1447 aa16.64■□□□□ 0.25
CPSF7-201ENST00000340437 FOXN1O15353 648 aa16.64■□□□□ 0.25
CPSF7-201ENST00000340437 RBM6P78332 1123 aaKnown RBP16.64■□□□□ 0.25
CPSF7-201ENST00000340437 LRRFIP1Q32MZ4 808 aaKnown RBP16.64■□□□□ 0.25
CPSF7-201ENST00000340437 KRT40Q6A162 431 aa16.64■□□□□ 0.25
CPSF7-201ENST00000340437 ZNF397Q8NF99 534 aaPredicted RBP16.64■□□□□ 0.25
CPSF7-201ENST00000340437 ZCRB1Q8TBF4 217 aaKnown RBP16.64■□□□□ 0.25
CPSF7-201ENST00000340437 TMEM232C9JQI7 657 aa16.64■□□□□ 0.25
CPSF7-201ENST00000340437 NLRP12P59046 1061 aa16.64■□□□□ 0.25
CPSF7-201ENST00000340437 KIF23Q02241 960 aaPredicted RBP16.64■□□□□ 0.25
CPSF7-201ENST00000340437 CNNM3Q8NE01 707 aa16.64■□□□□ 0.25
CPSF7-201ENST00000340437 MNS1Q8NEH6 495 aa16.64■□□□□ 0.25
CPSF7-201ENST00000340437 JCADQ9P266 1359 aa16.64■□□□□ 0.25
CPSF7-201ENST00000340437 MROH7-TTC4A0A0A0MT08 1334 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 A0A0U1RQG5 324 aaPredicted RBP16.63■□□□□ 0.25
CPSF7-201ENST00000340437 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 OLFM4Q6UX06 510 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 NYAP1Q6ZVC0 841 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 ZSWIM4Q9H7M6 989 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 ARHGAP29Q52LW3 1261 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 CPLX2Q6PUV4 134 aaKnown RBP16.63■□□□□ 0.25
CPSF7-201ENST00000340437 CYB5R4Q7L1T6 521 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 TRMT44Q8IYL2 757 aaKnown RBP16.63■□□□□ 0.25
CPSF7-201ENST00000340437 NUP133Q8WUM0 1156 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 KCNJ14Q9UNX9 436 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 CCDC191Q8NCU4 936 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 TRERF1Q96PN7 1200 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 C19orf44Q9H6X5 657 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 FANCLQ9NW38 375 aa16.63■□□□□ 0.25
CPSF7-201ENST00000340437 MARF1Q9Y4F3 1742 aaKnown RBP16.62■□□□□ 0.25
CPSF7-201ENST00000340437 APPBP2Q92624 585 aa16.62■□□□□ 0.25
CPSF7-201ENST00000340437 ERO1AQ96HE7 468 aa16.62■□□□□ 0.25
CPSF7-201ENST00000340437 DDX41Q9UJV9 622 aaKnown RBP16.62■□□□□ 0.25
CPSF7-201ENST00000340437 IQSEC3Q9UPP2 1182 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-201ENST00000340437 AKAP2Q9Y2D5 859 aa16.62■□□□□ 0.25
CPSF7-201ENST00000340437 SALL1Q9NSC2 1324 aa16.62■□□□□ 0.25
CPSF7-201ENST00000340437 GOLGA8AA7E2F4 631 aa16.62■□□□□ 0.25
CPSF7-201ENST00000340437 POLR3GO15318 223 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-201ENST00000340437 TOP1P11387 765 aaKnown RBP16.62■□□□□ 0.25
CPSF7-201ENST00000340437 CDC27P30260 824 aa16.62■□□□□ 0.25
CPSF7-201ENST00000340437 IARSP41252 1262 aaKnown RBP16.62■□□□□ 0.25
CPSF7-201ENST00000340437 GRAMD1CQ8IYS0 662 aa16.62■□□□□ 0.25
CPSF7-201ENST00000340437 KRT222Q8N1A0 295 aa16.62■□□□□ 0.25
CPSF7-201ENST00000340437 CPLX3Q8WVH0 158 aa16.62■□□□□ 0.25
CPSF7-201ENST00000340437 TMEM67Q5HYA8 995 aa16.61■□□□□ 0.25
CPSF7-201ENST00000340437 TBC1D10CQ8IV04 446 aa16.61■□□□□ 0.25
CPSF7-201ENST00000340437 MB21D2Q8IYB1 491 aaPredicted RBP16.61■□□□□ 0.25
CPSF7-201ENST00000340437 FOXP2O15409 715 aa16.61■□□□□ 0.25
CPSF7-201ENST00000340437 ATL3Q6DD88 541 aa16.61■□□□□ 0.25
CPSF7-201ENST00000340437 KLHL10Q6JEL2 608 aa16.61■□□□□ 0.25
CPSF7-201ENST00000340437 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
CPSF7-201ENST00000340437 IFIT3O14879 490 aaKnown RBP16.61■□□□□ 0.25
CPSF7-201ENST00000340437 MCAMP43121 646 aa16.61■□□□□ 0.25
CPSF7-201ENST00000340437 UTP14CQ5TAP6 766 aaKnown RBP16.61■□□□□ 0.25
CPSF7-201ENST00000340437 AIDAQ96BJ3 306 aa16.61■□□□□ 0.25
CPSF7-201ENST00000340437 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.61■□□□□ 0.254e-7■■■□□ 16.7
CPSF7-201ENST00000340437 A0A1W2PQ27 194 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 A0A1W2PQ64 194 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 A0A1W2PQD8 194 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 hCG_1642624A0A1W2PR95 340 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 YEATS4O95619 227 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 LONRF3Q496Y0 759 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 DNAJC10Q8IXB1 793 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 AGXT2Q9BYV1 514 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 POLR3EQ9NVU0 708 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 KIF6Q6ZMV9 814 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 BRAPQ7Z569 592 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 CCDC150Q8NCX0 1101 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 UBXN4Q92575 508 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 GREM2Q9H772 168 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 ZBTB43O43298 467 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 ITGA6P23229 1130 aa16.6■□□□□ 0.25
CPSF7-201ENST00000340437 ADKP55263 362 aaKnown RBP16.6■□□□□ 0.25
CPSF7-201ENST00000340437 ANGEL1Q9UNK9 670 aaKnown RBP16.6■□□□□ 0.25
CPSF7-201ENST00000340437 CRYBG1Q9Y4K1 1723 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms