RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 VPS37DQ86XT2 251 aa20.58■□□□□ 0.89
H3F3C-201ENST00000340398 ANKRD13AQ8IZ07 590 aa20.58■□□□□ 0.89
H3F3C-201ENST00000340398 SSH1Q8WYL5 1049 aa20.58■□□□□ 0.89
H3F3C-201ENST00000340398 TEPSINQ96N21 525 aa20.58■□□□□ 0.89
H3F3C-201ENST00000340398 TMEM39BQ9GZU3 492 aa20.58■□□□□ 0.89
H3F3C-201ENST00000340398 ELP3Q9H9T3 547 aa20.58■□□□□ 0.89
H3F3C-201ENST00000340398 UNCXA6NJT0 531 aa20.57■□□□□ 0.88
H3F3C-201ENST00000340398 BCAMP50895 628 aa20.57■□□□□ 0.88
H3F3C-201ENST00000340398 CNKSR2Q8WXI2 1034 aa20.57■□□□□ 0.88
H3F3C-201ENST00000340398 USP44Q9H0E7 712 aa20.57■□□□□ 0.88
H3F3C-201ENST00000340398 FRAT2O75474 233 aaPredicted RBP20.56■□□□□ 0.88
H3F3C-201ENST00000340398 PDE8BO95263 885 aa20.56■□□□□ 0.88
H3F3C-201ENST00000340398 CACNB3P54284 484 aa20.56■□□□□ 0.88
H3F3C-201ENST00000340398 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.56■□□□□ 0.88
H3F3C-201ENST00000340398 VGLL2Q8N8G2 317 aa20.56■□□□□ 0.88
H3F3C-201ENST00000340398 TRIM17Q9Y577 477 aa20.56■□□□□ 0.88
H3F3C-201ENST00000340398 CRHR2Q13324 411 aa20.55■□□□□ 0.88
H3F3C-201ENST00000340398 TNFAIP1Q13829 316 aa20.55■□□□□ 0.88
H3F3C-201ENST00000340398 OTOP1Q7RTM1 612 aa20.55■□□□□ 0.88
H3F3C-201ENST00000340398 OPTNQ96CV9 577 aa20.55■□□□□ 0.88
H3F3C-201ENST00000340398 CAP1Q01518 475 aa20.54■□□□□ 0.88
H3F3C-201ENST00000340398 CAVIN4Q5BKX8 364 aa20.54■□□□□ 0.88
H3F3C-201ENST00000340398 TESPA1A2RU30 521 aaPredicted RBP20.53■□□□□ 0.88
H3F3C-201ENST00000340398 MAP3K9P80192 1104 aa20.53■□□□□ 0.88
H3F3C-201ENST00000340398 CD99L2Q8TCZ2 262 aa20.53■□□□□ 0.88
H3F3C-201ENST00000340398 CDCA7LQ96GN5 454 aa20.53■□□□□ 0.88
H3F3C-201ENST00000340398 MS4A4AQ96JQ5 239 aa20.53■□□□□ 0.88
H3F3C-201ENST00000340398 CENPFP49454 3210 aa20.53■□□□□ 0.88
H3F3C-201ENST00000340398 PTPRCP08575 1304 aa20.53■□□□□ 0.88
H3F3C-201ENST00000340398 SLFN5Q08AF3 891 aa20.52■□□□□ 0.88
H3F3C-201ENST00000340398 VGLL4Q14135 290 aa20.52■□□□□ 0.88
H3F3C-201ENST00000340398 OTUD7BQ6GQQ9 843 aa20.52■□□□□ 0.88
H3F3C-201ENST00000340398 OTOFQ9HC10 1997 aa20.52■□□□□ 0.87
H3F3C-201ENST00000340398 E9PSI1 815 aa20.51■□□□□ 0.87
H3F3C-201ENST00000340398 FGFR2P21802 821 aa20.51■□□□□ 0.87
H3F3C-201ENST00000340398 TNNI2P48788 182 aa20.51■□□□□ 0.87
H3F3C-201ENST00000340398 HDLBPQ00341 1268 aaKnown RBP20.51■□□□□ 0.87
H3F3C-201ENST00000340398 TBC1D22AQ8WUA7 517 aa20.51■□□□□ 0.87
H3F3C-201ENST00000340398 HTTP42858 3142 aa20.51■□□□□ 0.87
H3F3C-201ENST00000340398 LAMB1P07942 1786 aa20.5■□□□□ 0.87
H3F3C-201ENST00000340398 RFX5P48382 616 aaPredicted RBP20.5■□□□□ 0.87
H3F3C-201ENST00000340398 APOBEC3HQ6NTF7 200 aaKnown RBP20.5■□□□□ 0.87
H3F3C-201ENST00000340398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.5■□□□□ 0.87
H3F3C-201ENST00000340398 BRI3BPQ8WY22 251 aa20.5■□□□□ 0.87
H3F3C-201ENST00000340398 TEKT1Q969V4 418 aa20.5■□□□□ 0.87
H3F3C-201ENST00000340398 ARAP2Q8WZ64 1704 aa20.5■□□□□ 0.87
H3F3C-201ENST00000340398 SP3Q02447 781 aa20.49■□□□□ 0.87
H3F3C-201ENST00000340398 ERO1AQ96HE7 468 aa20.49■□□□□ 0.87
H3F3C-201ENST00000340398 ZDHHC15Q96MV8 337 aa20.49■□□□□ 0.87
H3F3C-201ENST00000340398 PTPN22Q9Y2R2 807 aa20.49■□□□□ 0.87
H3F3C-201ENST00000340398 CCL15-CCL14A0A0B4J2E2 113 aa20.48■□□□□ 0.87
H3F3C-201ENST00000340398 POTEFA5A3E0 1075 aa20.48■□□□□ 0.87
H3F3C-201ENST00000340398 EYA2O00167 538 aa20.48■□□□□ 0.87
H3F3C-201ENST00000340398 IFIT1P09914 478 aaKnown RBP20.48■□□□□ 0.87
H3F3C-201ENST00000340398 PUM3Q15397 648 aaKnown RBP20.48■□□□□ 0.87
H3F3C-201ENST00000340398 CCL15Q16663 113 aa20.48■□□□□ 0.87
H3F3C-201ENST00000340398 OTUD5Q96G74 571 aa20.48■□□□□ 0.87
H3F3C-201ENST00000340398 MRIQ9BWK5 157 aa20.48■□□□□ 0.87
H3F3C-201ENST00000340398 PRPF38BQ5VTL8 546 aaKnown RBP20.47■□□□□ 0.87
H3F3C-201ENST00000340398 ATG9AQ7Z3C6 839 aa20.47■□□□□ 0.87
H3F3C-201ENST00000340398 FAM43AQ8N2R8 423 aa20.47■□□□□ 0.87
H3F3C-201ENST00000340398 ZKSCAN4Q969J2 545 aaPredicted RBP20.47■□□□□ 0.87
H3F3C-201ENST00000340398 EFCC1Q9HA90 598 aa20.47■□□□□ 0.87
H3F3C-201ENST00000340398 CSADQ9Y600 493 aa20.47■□□□□ 0.87
H3F3C-201ENST00000340398 MKI67P46013 3256 aaKnown RBP20.46■□□□□ 0.87
H3F3C-201ENST00000340398 MIGA2Q7L4E1 593 aa20.46■□□□□ 0.87
H3F3C-201ENST00000340398 KIAA0100Q14667 2235 aaKnown RBP20.46■□□□□ 0.87
H3F3C-201ENST00000340398 SLC5A1P13866 664 aa20.45■□□□□ 0.86
H3F3C-201ENST00000340398 GTF2A2P52657 109 aa20.45■□□□□ 0.86
H3F3C-201ENST00000340398 TAF1CQ15572 869 aaPredicted RBP20.45■□□□□ 0.86
H3F3C-201ENST00000340398 LPIN2Q92539 896 aa20.45■□□□□ 0.86
H3F3C-201ENST00000340398 WRNIP1Q96S55 665 aa20.45■□□□□ 0.86
H3F3C-201ENST00000340398 SIL1Q9H173 461 aa20.45■□□□□ 0.86
H3F3C-201ENST00000340398 SMC4Q9NTJ3 1288 aa20.45■□□□□ 0.86
H3F3C-201ENST00000340398 SNCAIPQ9Y6H5 919 aa20.45■□□□□ 0.86
H3F3C-201ENST00000340398 BRCA2P51587 3418 aa20.44■□□□□ 0.86
H3F3C-201ENST00000340398 ALDH1L2Q3SY69 923 aa20.44■□□□□ 0.86
H3F3C-201ENST00000340398 HHIPL2Q6UWX4 724 aa20.44■□□□□ 0.86
H3F3C-201ENST00000340398 FAM83AQ86UY5 434 aa20.44■□□□□ 0.86
H3F3C-201ENST00000340398 ZFYVE28Q9HCC9 887 aa20.44■□□□□ 0.86
H3F3C-201ENST00000340398 TMOD2Q9NZR1 351 aa20.44■□□□□ 0.86
H3F3C-201ENST00000340398 SUGT1Q9Y2Z0 365 aa20.44■□□□□ 0.86
H3F3C-201ENST00000340398 SPDYE5A6NIY4 337 aa20.43■□□□□ 0.86
H3F3C-201ENST00000340398 FKBP1CQ5VVH2 108 aa20.43■□□□□ 0.86
H3F3C-201ENST00000340398 ERO1BQ86YB8 467 aa20.43■□□□□ 0.86
H3F3C-201ENST00000340398 TRMT2AQ8IZ69 625 aaKnown RBP20.43■□□□□ 0.86
H3F3C-201ENST00000340398 WDR66Q8TBY9 1149 aa20.43■□□□□ 0.86
H3F3C-201ENST00000340398 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
H3F3C-201ENST00000340398 KIF16BQ96L93 1317 aa20.43■□□□□ 0.86
H3F3C-201ENST00000340398 IRF6O14896 467 aa20.42■□□□□ 0.86
H3F3C-201ENST00000340398 TCP10Q12799 353 aa20.42■□□□□ 0.86
H3F3C-201ENST00000340398 DIXDC1Q155Q3 683 aa20.42■□□□□ 0.86
H3F3C-201ENST00000340398 INTS3Q68E01 1043 aaKnown RBP20.42■□□□□ 0.86
H3F3C-201ENST00000340398 BTBD19C9JJ37 291 aa20.41■□□□□ 0.86
H3F3C-201ENST00000340398 UBTFL1P0CB47 393 aaPredicted RBP20.41■□□□□ 0.86
H3F3C-201ENST00000340398 EN2P19622 333 aaPredicted RBP20.41■□□□□ 0.86
H3F3C-201ENST00000340398 INPP5BP32019 993 aa20.41■□□□□ 0.86
H3F3C-201ENST00000340398 CDC42EP5Q6NZY7 148 aa20.41■□□□□ 0.86
H3F3C-201ENST00000340398 PA2G4Q9UQ80 394 aaKnown RBP20.41■□□□□ 0.86
H3F3C-201ENST00000340398 DAGLAQ9Y4D2 1042 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms