RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 LIMCH1Q9UPQ0 1083 aa25.25■■□□□ 1.63
VRK2-201ENST00000340157 E7EWF7 191 aa25.24■■□□□ 1.63
VRK2-201ENST00000340157 PRDX5P30044 214 aa25.24■■□□□ 1.63
VRK2-201ENST00000340157 HAND2P61296 217 aa25.24■■□□□ 1.63
VRK2-201ENST00000340157 MIGA1Q8NAN2 632 aa25.24■■□□□ 1.63
VRK2-201ENST00000340157 ANP32EQ9BTT0 268 aa25.24■■□□□ 1.63
VRK2-201ENST00000340157 EPB41L4AQ9HCS5 686 aaPredicted RBP25.24■■□□□ 1.63
VRK2-201ENST00000340157 CIZ1Q9ULV3 898 aaPredicted RBP25.24■■□□□ 1.63
VRK2-201ENST00000340157 CCDC125Q86Z20 511 aa25.23■■□□□ 1.63
VRK2-201ENST00000340157 NSUN4Q96CB9 384 aaKnown RBP25.23■■□□□ 1.63
VRK2-201ENST00000340157 NBPF3Q9H094 633 aa25.23■■□□□ 1.63
VRK2-201ENST00000340157 ALDH8A1Q9H2A2 487 aaPredicted RBP25.23■■□□□ 1.63
VRK2-201ENST00000340157 CD209Q9NNX6 404 aa25.23■■□□□ 1.63
VRK2-201ENST00000340157 DLEC1Q9Y238 1755 aa25.23■■□□□ 1.63
VRK2-201ENST00000340157 CHRNA5P30532 468 aa25.23■■□□□ 1.63
VRK2-201ENST00000340157 TOB2Q14106 344 aaPredicted RBP25.23■■□□□ 1.63
VRK2-201ENST00000340157 ZNF622Q969S3 477 aaKnown RBP eCLIP25.23■■□□□ 1.63
VRK2-201ENST00000340157 SALL1Q9NSC2 1324 aa25.22■■□□□ 1.63
VRK2-201ENST00000340157 PRKAB2O43741 272 aa25.22■■□□□ 1.63
VRK2-201ENST00000340157 IL1R1P14778 569 aa25.22■■□□□ 1.63
VRK2-201ENST00000340157 MECOMQ03112 1051 aa25.22■■□□□ 1.63
VRK2-201ENST00000340157 STYK1Q6J9G0 422 aa25.22■■□□□ 1.63
VRK2-201ENST00000340157 RIOK1Q9BRS2 568 aaKnown RBP25.22■■□□□ 1.63
VRK2-201ENST00000340157 C10orf71Q711Q0 1435 aa25.22■■□□□ 1.63
VRK2-201ENST00000340157 GSG1L2A8MUP6 293 aa25.21■■□□□ 1.63
VRK2-201ENST00000340157 H0YIN7 160 aa25.21■■□□□ 1.63
VRK2-201ENST00000340157 NBR1Q14596 966 aa25.21■■□□□ 1.63
VRK2-201ENST00000340157 ALX1Q15699 326 aa25.21■■□□□ 1.63
VRK2-201ENST00000340157 IMMTQ16891 758 aaKnown RBP25.21■■□□□ 1.63
VRK2-201ENST00000340157 PATL2C9JE40 543 aaKnown RBP25.21■■□□□ 1.63
VRK2-201ENST00000340157 C6orf229H3BNL8 230 aa25.21■■□□□ 1.63
VRK2-201ENST00000340157 NFKBIBQ15653 356 aa25.21■■□□□ 1.63
VRK2-201ENST00000340157 NAA16Q6N069 864 aaPredicted RBP25.21■■□□□ 1.63
VRK2-201ENST00000340157 TPCN1Q9ULQ1 816 aa25.21■■□□□ 1.63
VRK2-201ENST00000340157 ZMYM6O95789 1325 aa25.21■■□□□ 1.63
VRK2-201ENST00000340157 ILDR1Q86SU0 546 aaPredicted RBP25.2■■□□□ 1.62
VRK2-201ENST00000340157 INTS4Q96HW7 963 aaKnown RBP25.2■■□□□ 1.62
VRK2-201ENST00000340157 APPP05067 770 aa25.19■■□□□ 1.62
VRK2-201ENST00000340157 ST3GAL1Q11201 340 aa25.19■■□□□ 1.62
VRK2-201ENST00000340157 GRIK5Q16478 980 aa25.19■■□□□ 1.62
VRK2-201ENST00000340157 IFNL3Q8IZI9 196 aa25.19■■□□□ 1.62
VRK2-201ENST00000340157 MPNDQ8N594 471 aa25.19■■□□□ 1.62
VRK2-201ENST00000340157 GOLGB1Q14789 3259 aaKnown RBP25.19■■□□□ 1.62
VRK2-201ENST00000340157 KIF13BQ9NQT8 1826 aa25.19■■□□□ 1.62
VRK2-201ENST00000340157 EXOSC10Q01780 885 aaKnown RBP25.19■■□□□ 1.62
VRK2-201ENST00000340157 ME3Q16798 604 aa25.19■■□□□ 1.62
VRK2-201ENST00000340157 WDR66Q8TBY9 1149 aa25.19■■□□□ 1.62
VRK2-201ENST00000340157 CWC22Q9HCG8 908 aaKnown RBP25.19■■□□□ 1.62
VRK2-201ENST00000340157 BAZ2AQ9UIF9 1905 aaKnown RBP25.19■■□□□ 1.62
VRK2-201ENST00000340157 TIAM2Q8IVF5 1701 aa25.19■■□□□ 1.62
VRK2-201ENST00000340157 MAGEB6P1A0A0J9YX57 407 aa25.18■■□□□ 1.62
VRK2-201ENST00000340157 DHX32Q7L7V1 743 aaKnown RBP25.18■■□□□ 1.62
VRK2-201ENST00000340157 TBC1D10CQ8IV04 446 aa25.18■■□□□ 1.62
VRK2-201ENST00000340157 SLC16A10Q8TF71 515 aa25.18■■□□□ 1.62
VRK2-201ENST00000340157 SLC4A4Q9Y6R1 1079 aa25.18■■□□□ 1.62
VRK2-201ENST00000340157 ZNF213O14771 459 aa25.17■■□□□ 1.62
VRK2-201ENST00000340157 HMGB1P09429 215 aaKnown RBP25.17■■□□□ 1.62
VRK2-201ENST00000340157 GNAT2P19087 354 aa25.17■■□□□ 1.62
VRK2-201ENST00000340157 DYNLL1P63167 89 aaKnown RBP25.17■■□□□ 1.62
VRK2-201ENST00000340157 RAB3GAP1Q15042 981 aa25.17■■□□□ 1.62
VRK2-201ENST00000340157 MYH2Q9UKX2 1941 aa25.17■■□□□ 1.62
VRK2-201ENST00000340157 PKP1Q13835 747 aa25.17■■□□□ 1.62
VRK2-201ENST00000340157 Q6ZUG5 572 aa25.17■■□□□ 1.62
VRK2-201ENST00000340157 LRRC2Q9BYS8 371 aa25.17■■□□□ 1.62
VRK2-201ENST00000340157 DPP8Q6V1X1 898 aaPredicted RBP25.16■■□□□ 1.62
VRK2-201ENST00000340157 NKX2-3Q8TAU0 364 aa25.16■■□□□ 1.62
VRK2-201ENST00000340157 SNED1Q8TER0 1413 aa25.16■■□□□ 1.62
VRK2-201ENST00000340157 RIMBP2O15034 1052 aa25.15■■□□□ 1.62
VRK2-201ENST00000340157 ANKRD1Q15327 319 aa25.15■■□□□ 1.62
VRK2-201ENST00000340157 ZSCAN31Q96LW9 406 aaPredicted RBP25.15■■□□□ 1.62
VRK2-201ENST00000340157 SH2B1Q9NRF2 756 aaPredicted RBP25.15■■□□□ 1.62
VRK2-201ENST00000340157 SPTY2D1Q68D10 685 aaPredicted RBP25.15■■□□□ 1.62
VRK2-201ENST00000340157 MB21D2Q8IYB1 491 aaPredicted RBP25.15■■□□□ 1.62
VRK2-201ENST00000340157 SDR42E1Q8WUS8 393 aa25.15■■□□□ 1.62
VRK2-201ENST00000340157 C7orf43Q8WVR3 580 aa25.15■■□□□ 1.62
VRK2-201ENST00000340157 AGXT2Q9BYV1 514 aa25.15■■□□□ 1.62
VRK2-201ENST00000340157 NAPBQ9H115 298 aa25.15■■□□□ 1.62
VRK2-201ENST00000340157 TACC3Q9Y6A5 838 aa25.14■■□□□ 1.61
VRK2-201ENST00000340157 LDHBP07195 334 aaKnown RBP25.13■■□□□ 1.61
VRK2-201ENST00000340157 CHST3Q7LGC8 479 aa25.13■■□□□ 1.61
VRK2-201ENST00000340157 NECAB1Q8N987 351 aa25.13■■□□□ 1.61
VRK2-201ENST00000340157 CNKSR1Q969H4 720 aa25.13■■□□□ 1.61
VRK2-201ENST00000340157 TMED8Q6PL24 325 aaPredicted RBP25.13■■□□□ 1.61
VRK2-201ENST00000340157 DZIP1Q86YF9 867 aaKnown RBP25.13■■□□□ 1.61
VRK2-201ENST00000340157 CCDC83Q8IWF9 413 aa25.13■■□□□ 1.61
VRK2-201ENST00000340157 TNPO1Q92973 898 aaKnown RBP25.13■■□□□ 1.61
VRK2-201ENST00000340157 FAM205AQ6ZU69 1335 aa25.12■■□□□ 1.61
VRK2-201ENST00000340157 COA1Q9GZY4 146 aa25.12■■□□□ 1.61
VRK2-201ENST00000340157 AATFQ9NY61 560 aaKnown RBP eCLIP25.12■■□□□ 1.61
VRK2-201ENST00000340157 CDK5RAP2Q96SN8 1893 aa25.11■■□□□ 1.61
VRK2-201ENST00000340157 ANTXR2P58335 489 aa25.11■■□□□ 1.61
VRK2-201ENST00000340157 BRF1Q92994 677 aa25.11■■□□□ 1.61
VRK2-201ENST00000340157 NACAP1Q9BZK3 213 aa25.11■■□□□ 1.61
VRK2-201ENST00000340157 ZDHHC9Q9Y397 364 aa25.11■■□□□ 1.61
VRK2-201ENST00000340157 ZNF646O15015 1829 aaPredicted RBP25.11■■□□□ 1.61
VRK2-201ENST00000340157 IGSF3O75054 1194 aa25.11■■□□□ 1.61
VRK2-201ENST00000340157 TDO2P48775 406 aa25.11■■□□□ 1.61
VRK2-201ENST00000340157 NCOA7Q8NI08 942 aa25.11■■□□□ 1.61
VRK2-201ENST00000340157 ZC3H12CQ9C0D7 883 aaKnown RBP25.11■■□□□ 1.61
VRK2-201ENST00000340157 INCENPQ9NQS7 918 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms