RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 MAP3K15Q6ZN16 1313 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 ATRNL1Q5VV63 1379 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 NFKBIEO00221 500 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 RPS6KA5O75582 802 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 MCM2P49736 904 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 R3HDM1Q15032 1099 aaKnown RBP6.57□□□□□ -1.36
CSDE1-202ENST00000339438 FOXD4L6Q3SYB3 417 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-202ENST00000339438 ZNF530Q6P9A1 599 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-202ENST00000339438 FOXD4L3Q6VB84 417 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-202ENST00000339438 LRRFIP2Q9Y608 721 aaKnown RBP6.57□□□□□ -1.36
CSDE1-202ENST00000339438 XIRP2A4UGR9 3374 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 WDR33Q9C0J8 1336 aaKnown RBP6.57□□□□□ -1.36
CSDE1-202ENST00000339438 GOLGA6L6A8MZA4 724 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.57□□□□□ -1.36
CSDE1-202ENST00000339438 GOLGA5Q8TBA6 731 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 IL25Q9H293 177 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 CCDC171Q6TFL3 1326 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 LTBP2Q14767 1821 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 A0A0G2JS52 829 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 ZSCAN22P10073 491 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-202ENST00000339438 BAG6P46379 1132 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 FOXR1Q6PIV2 292 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 C15orf52Q6ZUT6 534 aaKnown RBP6.57□□□□□ -1.36
CSDE1-202ENST00000339438 CCAR2Q8N163 923 aaKnown RBP6.57□□□□□ -1.36
CSDE1-202ENST00000339438 CCDC191Q8NCU4 936 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 CCDC87Q9NVE4 849 aa6.57□□□□□ -1.36
CSDE1-202ENST00000339438 ERC2O15083 957 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 CSB-PGBD3P0DP91 1061 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 LMOD3Q0VAK6 560 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 SART3Q15020 963 aaKnown RBP6.56□□□□□ -1.36
CSDE1-202ENST00000339438 TTC14Q96N46 770 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 ZSCAN16Q9H4T2 348 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-202ENST00000339438 COL2A1P02458 1487 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-202ENST00000339438 H7C1W4 665 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 SRGNP10124 158 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 TGFB2P61812 414 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 TPD52L1Q16890 204 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-202ENST00000339438 PRR5LQ6MZQ0 368 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 ORC3Q9UBD5 711 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-202ENST00000339438 IPO8O15397 1037 aaKnown RBP6.56□□□□□ -1.36
CSDE1-202ENST00000339438 MAGEA9P43362 315 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 ANAPC15P60006 121 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 ST3GAL1Q11201 340 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 IQCB1Q15051 598 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 GRIPAP1Q4V328 841 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 E4F1Q66K89 784 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-202ENST00000339438 SARM1Q6SZW1 724 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 MIS18AQ9NYP9 233 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 CCNL1Q9UK58 526 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-202ENST00000339438 ELP1O95163 1332 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 PASKQ96RG2 1323 aa6.56□□□□□ -1.36
CSDE1-202ENST00000339438 F13A1P00488 732 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 SYT1P21579 422 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 TYRO3Q06418 890 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 BEND3Q5T5X7 828 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 SRP68Q9UHB9 627 aaKnown RBP6.55□□□□□ -1.36
CSDE1-202ENST00000339438 H3BQF6 201 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 ATP8B1O43520 1251 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 GNAI3P08754 354 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 INHBEP58166 350 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 EVA1CP58658 441 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 RNF20Q5VTR2 975 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 CXorf56Q9H5V9 222 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 CASP8AP2Q9UKL3 1982 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.55□□□□□ -1.36
CSDE1-202ENST00000339438 SEC31AO94979 1220 aaKnown RBP6.55□□□□□ -1.36
CSDE1-202ENST00000339438 DNAJC21Q5F1R6 531 aaKnown RBP6.55□□□□□ -1.36
CSDE1-202ENST00000339438 NBPF11Q86T75 865 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 BANK1Q8NDB2 785 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 MED4Q9NPJ6 270 aa6.55□□□□□ -1.36
CSDE1-202ENST00000339438 A1BGP04217 495 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 CCDC192P0DO97 292 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 LIG1P18858 919 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 SF3B3Q15393 1217 aaKnown RBP6.54□□□□□ -1.36
CSDE1-202ENST00000339438 PTPN14Q15678 1187 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 GIGYF2Q6Y7W6 1299 aaKnown RBP6.54□□□□□ -1.36
CSDE1-202ENST00000339438 TTLL7Q6ZT98 887 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 EXOC4Q96A65 974 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 FUT8Q9BYC5 575 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 ADAM21Q9UKJ8 722 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 SIP14410 1827 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 A0A1B0GUL7 405 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 OAS2P29728 719 aaKnown RBP6.54□□□□□ -1.36
CSDE1-202ENST00000339438 TNNT3P45378 269 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-202ENST00000339438 ANKRD44Q8N8A2 993 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 NECTIN2Q92692 538 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 ZNF428Q96B54 188 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 DRC1Q96MC2 740 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 ESYT1Q9BSJ8 1104 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 DDX21Q9NR30 783 aaKnown RBP eCLIP6.54□□□□□ -1.36
CSDE1-202ENST00000339438 TOMM22Q9NS69 142 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 TULP1O00294 542 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-202ENST00000339438 POLR3GO15318 223 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-202ENST00000339438 ACTN2P35609 894 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 CORO7P57737 925 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 DNM1Q05193 864 aaKnown RBP6.54□□□□□ -1.36
CSDE1-202ENST00000339438 MTX1Q13505 466 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 ANO6Q4KMQ2 910 aa6.54□□□□□ -1.36
CSDE1-202ENST00000339438 FHDC1Q9C0D6 1143 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-202ENST00000339438 MTMR6Q9Y217 621 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms