RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 LDHAL6AQ6ZMR3 332 aa19.18■□□□□ 0.66
LITAF-201ENST00000339430 COL23A1Q86Y22 540 aaPredicted RBP19.18■□□□□ 0.66
LITAF-201ENST00000339430 SMARCC2Q8TAQ2 1214 aa19.18■□□□□ 0.66
LITAF-201ENST00000339430 BICD2Q8TD16 824 aa19.18■□□□□ 0.66
LITAF-201ENST00000339430 TNMDQ9H2S6 317 aa19.18■□□□□ 0.66
LITAF-201ENST00000339430 TTC12Q9H892 705 aaPredicted RBP19.18■□□□□ 0.66
LITAF-201ENST00000339430 SEC31BQ9NQW1 1179 aa19.18■□□□□ 0.66
LITAF-201ENST00000339430 LAMB2P55268 1798 aa19.18■□□□□ 0.66
LITAF-201ENST00000339430 CARMIL3Q8ND23 1372 aa19.18■□□□□ 0.66
LITAF-201ENST00000339430 PTPDC1A2A3K4 754 aa19.18■□□□□ 0.66
LITAF-201ENST00000339430 NPHP1O15259 732 aa19.18■□□□□ 0.66
LITAF-201ENST00000339430 SF3B2Q13435 895 aaKnown RBP19.18■□□□□ 0.66
LITAF-201ENST00000339430 NR1I2O75469 434 aa19.17■□□□□ 0.66
LITAF-201ENST00000339430 SLC10A5Q5PT55 438 aa19.17■□□□□ 0.66
LITAF-201ENST00000339430 SPEF2Q9C093 1822 aa19.17■□□□□ 0.66
LITAF-201ENST00000339430 ZAP70P43403 619 aa19.17■□□□□ 0.66
LITAF-201ENST00000339430 TYRO3Q06418 890 aa19.17■□□□□ 0.66
LITAF-201ENST00000339430 GPHNQ9NQX3 736 aaPredicted RBP19.17■□□□□ 0.66
LITAF-201ENST00000339430 FBXO3Q9UK99 471 aa19.17■□□□□ 0.66
LITAF-201ENST00000339430 AKAP2Q9Y2D5 859 aa19.17■□□□□ 0.66
LITAF-201ENST00000339430 TPM2P07951 284 aa19.16■□□□□ 0.66
LITAF-201ENST00000339430 GUCY1B3Q02153 619 aa19.16■□□□□ 0.66
LITAF-201ENST00000339430 FTOQ9C0B1 505 aaKnown RBP eCLIP19.16■□□□□ 0.66
LITAF-201ENST00000339430 CNNM1Q9NRU3 951 aa19.16■□□□□ 0.66
LITAF-201ENST00000339430 MRVI1Q9Y6F6 885 aa19.16■□□□□ 0.66
LITAF-201ENST00000339430 MYH15Q9Y2K3 1946 aa19.15■□□□□ 0.66
LITAF-201ENST00000339430 KIAA2012Q0VF49 1180 aa19.15■□□□□ 0.66
LITAF-201ENST00000339430 DEFB132Q7Z7B7 95 aa19.15■□□□□ 0.66
LITAF-201ENST00000339430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.15■□□□□ 0.66
LITAF-201ENST00000339430 LLPHQ9BRT6 129 aaKnown RBP19.15■□□□□ 0.66
LITAF-201ENST00000339430 ZSCAN16Q9H4T2 348 aaPredicted RBP19.15■□□□□ 0.66
LITAF-201ENST00000339430 RIPOR2Q9Y4F9 1068 aa19.15■□□□□ 0.66
LITAF-201ENST00000339430 FOXP2O15409 715 aa19.14■□□□□ 0.66
LITAF-201ENST00000339430 PDIA3P30101 505 aaKnown RBP19.14■□□□□ 0.66
LITAF-201ENST00000339430 METTL24Q5JXM2 366 aa19.14■□□□□ 0.66
LITAF-201ENST00000339430 AGXT2Q9BYV1 514 aa19.14■□□□□ 0.66
LITAF-201ENST00000339430 PNPLA7Q6ZV29 1317 aa19.14■□□□□ 0.65
LITAF-201ENST00000339430 TM4SF1P30408 202 aa19.14■□□□□ 0.65
LITAF-201ENST00000339430 BAG6P46379 1132 aa19.14■□□□□ 0.65
LITAF-201ENST00000339430 SF3B3Q15393 1217 aaKnown RBP19.14■□□□□ 0.65
LITAF-201ENST00000339430 LUZP1Q86V48 1076 aa19.14■□□□□ 0.65
LITAF-201ENST00000339430 CNBD1Q8NA66 436 aa19.14■□□□□ 0.65
LITAF-201ENST00000339430 PUS7LQ9H0K6 701 aaKnown RBP19.14■□□□□ 0.65
LITAF-201ENST00000339430 RTL9Q8NET4 1388 aa19.14■□□□□ 0.65
LITAF-201ENST00000339430 ANO6Q4KMQ2 910 aa19.13■□□□□ 0.65
LITAF-201ENST00000339430 C17orf53Q8N3J3 647 aaPredicted RBP19.13■□□□□ 0.65
LITAF-201ENST00000339430 SPC24Q8NBT2 197 aa19.13■□□□□ 0.65
LITAF-201ENST00000339430 FLAD1Q8NFF5 587 aa19.13■□□□□ 0.65
LITAF-201ENST00000339430 NLRP3Q96P20 1036 aa19.13■□□□□ 0.65
LITAF-201ENST00000339430 ATP2B3Q16720 1220 aa19.13■□□□□ 0.65
LITAF-201ENST00000339430 FAM200AQ8TCP9 573 aa19.13■□□□□ 0.65
LITAF-201ENST00000339430 MPHOSPH8Q99549 860 aa19.13■□□□□ 0.65
LITAF-201ENST00000339430 CLSTN2Q9H4D0 955 aa19.13■□□□□ 0.65
LITAF-201ENST00000339430 DDX19AQ9NUU7 478 aaKnown RBP19.13■□□□□ 0.65
LITAF-201ENST00000339430 CFAP45Q9UL16 551 aa19.13■□□□□ 0.65
LITAF-201ENST00000339430 MYH7P12883 1935 aa19.12■□□□□ 0.65
LITAF-201ENST00000339430 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.12■□□□□ 0.65
LITAF-201ENST00000339430 FGAP02671 866 aa19.12■□□□□ 0.65
LITAF-201ENST00000339430 HMGN5P82970 282 aaKnown RBP19.12■□□□□ 0.65
LITAF-201ENST00000339430 RIC1Q4ADV7 1423 aa19.12■□□□□ 0.65
LITAF-201ENST00000339430 SERPINB2P05120 415 aa19.12■□□□□ 0.65
LITAF-201ENST00000339430 ADD1P35611 737 aaKnown RBP19.12■□□□□ 0.65
LITAF-201ENST00000339430 DDR1Q08345 913 aa19.12■□□□□ 0.65
LITAF-201ENST00000339430 SLC15A2Q16348 729 aa19.12■□□□□ 0.65
LITAF-201ENST00000339430 PRR5LQ6MZQ0 368 aa19.12■□□□□ 0.65
LITAF-201ENST00000339430 RAB11FIP4Q86YS3 637 aa19.12■□□□□ 0.65
LITAF-201ENST00000339430 CASZ1Q86V15 1759 aa19.12■□□□□ 0.65
LITAF-201ENST00000339430 IMMTQ16891 758 aaKnown RBP19.11■□□□□ 0.65
LITAF-201ENST00000339430 LRRFIP1Q32MZ4 808 aaKnown RBP19.11■□□□□ 0.65
LITAF-201ENST00000339430 NAA16Q6N069 864 aaPredicted RBP19.11■□□□□ 0.65
LITAF-201ENST00000339430 TICAM2Q86XR7 235 aa19.11■□□□□ 0.65
LITAF-201ENST00000339430 MYO5AQ9Y4I1 1855 aaKnown RBP19.11■□□□□ 0.65
LITAF-201ENST00000339430 IGHMBP2P38935 993 aaKnown RBP19.11■□□□□ 0.65
LITAF-201ENST00000339430 MCAMP43121 646 aa19.11■□□□□ 0.65
LITAF-201ENST00000339430 NLGN1Q8N2Q7 840 aa19.11■□□□□ 0.65
LITAF-201ENST00000339430 ZNF274Q96GC6 653 aaPredicted RBP19.11■□□□□ 0.65
LITAF-201ENST00000339430 SALL1Q9NSC2 1324 aa19.1■□□□□ 0.65
LITAF-201ENST00000339430 ZFYP08048 801 aaPredicted RBP19.1■□□□□ 0.65
LITAF-201ENST00000339430 KLHL34Q8N239 644 aa19.1■□□□□ 0.65
LITAF-201ENST00000339430 APPBP2Q92624 585 aa19.1■□□□□ 0.65
LITAF-201ENST00000339430 USP28Q96RU2 1077 aa19.1■□□□□ 0.65
LITAF-201ENST00000339430 CDC5LQ99459 802 aaKnown RBP19.1■□□□□ 0.65
LITAF-201ENST00000339430 CBX8Q9HC52 389 aa19.1■□□□□ 0.65
LITAF-201ENST00000339430 STK32BQ9NY57 414 aa19.1■□□□□ 0.65
LITAF-201ENST00000339430 CTNNA3Q9UI47 895 aa19.1■□□□□ 0.65
LITAF-201ENST00000339430 COL4A1P02462 1669 aa19.1■□□□□ 0.65
LITAF-201ENST00000339430 POLRMTO00411 1230 aaKnown RBP19.1■□□□□ 0.65
LITAF-201ENST00000339430 GPAA1O43292 621 aa19.1■□□□□ 0.65
LITAF-201ENST00000339430 DNTTIP2Q5QJE6 756 aaKnown RBP19.1■□□□□ 0.65
LITAF-201ENST00000339430 KIF3AQ9Y496 699 aa19.1■□□□□ 0.65
LITAF-201ENST00000339430 LRP5O75197 1615 aa19.09■□□□□ 0.65
LITAF-201ENST00000339430 TAF1P21675 1872 aa19.09■□□□□ 0.65
LITAF-201ENST00000339430 AKAP11Q9UKA4 1901 aa19.09■□□□□ 0.65
LITAF-201ENST00000339430 SASS6Q6UVJ0 657 aa19.09■□□□□ 0.65
LITAF-201ENST00000339430 VGLL2Q8N8G2 317 aa19.09■□□□□ 0.65
LITAF-201ENST00000339430 HELBQ8NG08 1087 aaPredicted RBP19.09■□□□□ 0.65
LITAF-201ENST00000339430 PRC1O43663 620 aa19.08■□□□□ 0.65
LITAF-201ENST00000339430 OTUD7BQ6GQQ9 843 aa19.08■□□□□ 0.65
LITAF-201ENST00000339430 DNAJC25Q9H1X3 360 aa19.08■□□□□ 0.65
LITAF-201ENST00000339430 TNRC6CQ9HCJ0 1690 aaKnown RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms